Organic-Inorganic hybrid silica monolith based immobilized titanium ion affinity chromatography column for analysis of mitochondrial phosphoproteome

Journal of Proteome Research

Volumn 9, Issue 8, 2010, Pages 4093-4101

  Hou, Chunyan ^a,b   Ma, Junfeng ^a,b   Tao, Dingyin ^a,b   Shan, Yichu ^a   Liang, Zhen ^a   Zhang, Lihua ^a   Zhang, Yukui ^a  

^a DALIAN INSTITUTE OF CHEMICAL PHYSICS   (China)

^b UNIVERSITY OF CHINESE ACADEMY OF SCIENCES   (China)

Author keywords

immobilized metal ion affinity chromatography; mitochondrial phosphoproteome; organic inorganic hybrid silica monolith; phosphopeptide enrichment; titanium ion

Indexed keywords

3 AMINOPROPYLTRIETHOXYSILANE; ALPHA CASEIN; AMINE; AMINOMETHYLPHOSPHONIC ACID; GLUTARALDEHYDE; MITOCHONDRIAL PROTEIN; PHOSPHONIC ACID DERIVATIVE; PHOSPHOPEPTIDE; PHOSPHOPROTEIN; PHOSPHOPROTEOME; PROTEOME; SILICON DIOXIDE; TETRAETHOXYSILANE; TITANIUM; UNCLASSIFIED DRUG;

ANIMAL TISSUE; ARTICLE; CHELATION; CONTROLLED STUDY; FALSE POSITIVE RESULT; GEL; HYBRID; IMMOBILIZED METAL AFFINITY CHROMATOGRAPHY; LIVER MITOCHONDRION; NONHUMAN; PRIORITY JOURNAL; PROTEIN ANALYSIS; PROTEIN FUNCTION; PROTEIN ISOLATION; RAT;

AMINO ACID SEQUENCE; ANIMALS; CHROMATOGRAPHY, AFFINITY; LIVER; MITOCHONDRIAL PROTEINS; MOLECULAR SEQUENCE DATA; MOLECULAR STRUCTURE; PEPTIDES; PHOSPHOPROTEINS; PROTEOMICS; RATS; SILANES; SILICON DIOXIDE; TANDEM MASS SPECTROMETRY; TITANIUM;

RATTUS;

EID: 77955454202     PISSN: 15353893     EISSN: 15353907     Source Type: Journal    
DOI: 10.1021/pr100294z     Document Type: Article

References (32)

1. Cohen, P. Eur. J. Biochem. 2001, 268, 5001-5010
2. Olsen, J. V.; Blagoev, B.; Gnad, F.; Macek, B.; Kumar, C.; Mortensen, P.; Mann, M. Cell 2006, 127, 635-648
3. Yan, W.; Aebersold, R.; Raines, E. W. J. Proteomics 2009, 72, 4-11
4. Mann, M.; Jensen, O. N. Nat. Biotechnol. 2003, 21, 255-261
5. Aebersold, R.; Mann, M. Nature 2003, 422, 198-207
6. Mann, M.; Ong, S. E.; Grønborg, M.; Steen, H.; Jensen, O. N.; Pandey, A. Trends Biotechnol. 2002, 20, 261-268
7. Gauci, S.; Helbig, A. O.; Slijper, M.; Krijgsveld, J.; Heck, A. J. R.; Mohammed, S. Anal. Chem. 2009, 81, 4493-4501
8. Han, G.; Ye, M.; Zou, H. Analyst 2008, 133, 1128-1138
9. Posewitz, M. C.; Tempst, P. Anal. Chem. 1999, 71, 2883-2892
10. Nühse, T. S.; Stensballe, A.; Jensen, O. N.; Peck, S. C. Mol. Cell. Proteomics 2003, 2, 1234-1243
11. Ficarro, S. B.; McCleland, M. L.; Stukenberg, P. T.; Burke, D. J.; Ross, M. M.; Shabanowitz, J.; Hunt, D. F.; White, F. M. Nat. Biotechnol. 2002, 20, 301-305
12. Feng, S.; Ye, M.; Zhou, H.; Jiang, X.; Jiang, X.; Zou, H.; Gong, B. Mol. Cell. Proteomics 2007, 6, 1656-1665
13. Xue, Y.; Wei, J.; Han, H.; Zhao, L.; Cao, D.; Wang, J.; Yang, X.; Zhang, Y.; Qian, X. J. Chromatogr., B: Analyt. Technol. Biomed. Life Sci. 2009, 877, 757-764
14. Liu, H.; Stupak, J.; Zheng, J.; Keller, B. O.; Brix, B. J.; Fliegel, L.; Li, L. Anal. Chem. 2004, 76, 4223-4232
15. Yu, Z.; Han, G.; Sun, S.; Jiang, X.; Chen, R.; Wang, F.; Wu, R.; Ye, M.; Zou, H. Anal. Chim. Acta 2009, 636, 34-41
16. Zhou, H.; Ye, M.; Dong, J.; Han, G.; Jiang, X.; Wu, R.; Zou, H. J. Proteome Res. 2008, 7, 3957-2467
17. Feng, S.; Pan, C.; Jiang, X.; Xu, S.; Zhou, H.; Ye, M.; Zou, H. Proteomics 2007, 7, 351-360
18. Tanaka, N.; Kobayashi, H.; Ishizuka, N.; Minakuchi, H.; Nakanishi, K.; Hosoya, K.; Ikegami, T. J. Chromatogr., A 2002, 965, 35-49
19. Haynes, J. D.; Malik, A. Anal. Chem. 2000, 72, 4090-4099
20. Ma, J.; Liang, Z.; Qiao, X.; Deng, Q.; Tao, D.; Zhang, L.; Zhang, Y. Anal. Chem. 2008, 80, 2949-2956
21. Ma, J.; Liu, J.; Sun, L.; Gao, L.; Liang, Z.; Zhang, L.; Zhang, Y. Anal. Chem. 2009, 81, 6534-6540
22. Schulenberg, B.; Aggeler, R.; Beechem, J. M.; Capaldi, R. A.; Patton, W. F. J. Biol. Chem. 2003, 278, 27251-27255
23. Jiang, X.; Ye, M.; Cheng, K.; Zou, H. J. Proteome Res. 2010, 9, 2743-2751
24. Zhao, L.; Wu, R.; Han, G.; Zhou, H.; Ren, L.; Tian, R.; Zou, H. J. Am. Soc. Mass Spectrom. 2008, 19, 1176-1186
25. Ishihama, Y.; Wei, F. Y.; Aoshima, K.; Sato, T.; Kuromitsu, J.; Oda, Y. J. Proteome Res. 2007, 6, 1139-1144
26. Schwartz, D.; Gygi, S. P. Nat. Biotechnol. 2005, 23, 1391-1398
27. Bodenmiller, B.; Mueller, L. N.; Mueller, M.; Domon, B.; Aebersold, R. Nat. Methods 2007, 4, 231-237
28. Ubersax, J. A.; Ferrell, J. E., Jr. Nat. Rev. Mol. Cell. Biol 2007, 8, 530-541
29. Nowak, G. J. Biol. Chem. 2002, 277, 43377-43388
30. Alonso, M.; Melani, M.; Converso, D.; Jaitovich, A.; Paz, C.; Carreras, M. C.; Medina, J. H.; Poderoso, J. J. J. Neurochem. 2004, 89, 248-256
31. Wu, H.; Kanatous, S. B.; Thurmond, F. A.; Gallardo, T.; Isotani, E.; Bassel-Duby, R.; Williams, R. S. Science 2002, 296, 349-352
32. Bhatia, V. N.; Perlman, D. H.; Costello, C. E.; McComb, M. E. Anal. Chem. 2009, 81, 9819-9823