메뉴 건너뛰기




Volumn 179, Issue 4, 2010, Pages 390-398

Comparison of gene order in the chromosome region containing a TERMINAL FLOWER 1 homolog in apricot and peach reveals microsynteny across angiosperms

Author keywords

Apricot; BAC contig; Gene order; Microsynteny; Peach; TFL1

Indexed keywords

ARABIDOPSIS; LILIOPSIDA; MAGNOLIOPHYTA; PRUNUS ARMENIACA; PRUNUS PERSICA;

EID: 77955423269     PISSN: 01689452     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.plantsci.2010.06.018     Document Type: Article
Times cited : (8)

References (61)
  • 2
    • 0035144847 scopus 로고    scopus 로고
    • Transition from vegetative to reproductive phase
    • Araki T. Transition from vegetative to reproductive phase. Curr. Opin. Plant Biol. 2001, 4:63-68.
    • (2001) Curr. Opin. Plant Biol. , vol.4 , pp. 63-68
    • Araki, T.1
  • 3
    • 0036007034 scopus 로고    scopus 로고
    • Molecular control and variation in the floral transition
    • Battey N.H., Tooke F. Molecular control and variation in the floral transition. Curr. Opin. Plant Biol. 2002, 5:62-68.
    • (2002) Curr. Opin. Plant Biol. , vol.5 , pp. 62-68
    • Battey, N.H.1    Tooke, F.2
  • 4
    • 0025667013 scopus 로고
    • Floricaula: a homeotic gene required for flower development in Antirrhinum majus
    • Coen E.S., Romero J.M., Doyle S., Elliott R., Murphy G., Carpente R. Floricaula: a homeotic gene required for flower development in Antirrhinum majus. Cell 1990, 63:1311-1322.
    • (1990) Cell , vol.63 , pp. 1311-1322
    • Coen, E.S.1    Romero, J.M.2    Doyle, S.3    Elliott, R.4    Murphy, G.5    Carpente, R.6
  • 5
    • 0034646560 scopus 로고    scopus 로고
    • The structure of Antirrhinum centroradialis protein (CEN) suggests a role as a kinase regulator
    • Banfield M.J., Brady R.L. The structure of Antirrhinum centroradialis protein (CEN) suggests a role as a kinase regulator. J. Mol. Biol. 2000, 297:1159-1170.
    • (2000) J. Mol. Biol. , vol.297 , pp. 1159-1170
    • Banfield, M.J.1    Brady, R.L.2
  • 6
    • 4544370633 scopus 로고    scopus 로고
    • Control of Arabidopsis flowering: the chill before the bloom
    • Henderson I.R., Dean C. Control of Arabidopsis flowering: the chill before the bloom. Development 2004, 131:3829-3838.
    • (2004) Development , vol.131 , pp. 3829-3838
    • Henderson, I.R.1    Dean, C.2
  • 7
    • 17644369683 scopus 로고    scopus 로고
    • Isolation of LEAFY and TERMINAL FLOWER 1 homologues from six fruit tree species in subfamily Maloideae of the Rosaceae
    • Esumi T., Tao R., Yonemori K. Isolation of LEAFY and TERMINAL FLOWER 1 homologues from six fruit tree species in subfamily Maloideae of the Rosaceae. Sex. Plant Reprod. 2005, 17:277-287.
    • (2005) Sex. Plant Reprod. , vol.17 , pp. 277-287
    • Esumi, T.1    Tao, R.2    Yonemori, K.3
  • 8
    • 60149104277 scopus 로고    scopus 로고
    • Four TFL1/CEN-like genes on distinct linkage groups show different expression patterns to regulate vegetative and reproductive development in apple (Malus×domestica Borkh.)
    • Mimida N., Kotoda N., Ueda T., Igarashi M., Hatsuyama Y., Iwanami H., Moriya S., Abe K. Four TFL1/CEN-like genes on distinct linkage groups show different expression patterns to regulate vegetative and reproductive development in apple (Malus×domestica Borkh.). Plant Cell Physiol. 2005, 50:394-412.
    • (2005) Plant Cell Physiol. , vol.50 , pp. 394-412
    • Mimida, N.1    Kotoda, N.2    Ueda, T.3    Igarashi, M.4    Hatsuyama, Y.5    Iwanami, H.6    Moriya, S.7    Abe, K.8
  • 11
    • 0001665940 scopus 로고
    • A mutation in the Arabidopsis TFL1 gene affects inflorescence meristem development
    • Shannon S, Meeks-Wagner D.R. A mutation in the Arabidopsis TFL1 gene affects inflorescence meristem development. Plant Cell 1991, 3:877-892.
    • (1991) Plant Cell , vol.3 , pp. 877-892
    • Shannon, S.1    Meeks-Wagner, D.R.2
  • 14
    • 0033520985 scopus 로고    scopus 로고
    • A pair of related genes with antagonistic roles in mediating flowering signals
    • Kobayashi Y., Kaya H., Goto K., Iwabuchi M., Araki T. A pair of related genes with antagonistic roles in mediating flowering signals. Science 1999, 286:1960-1962.
    • (1999) Science , vol.286 , pp. 1960-1962
    • Kobayashi, Y.1    Kaya, H.2    Goto, K.3    Iwabuchi, M.4    Araki, T.5
  • 15
    • 0023655581 scopus 로고
    • Complete amino acid sequence of a basic 21-kDa protein from bovine brain cytosol
    • Schoentgen F., Saccoccio F., Jolles J., Bernier I., Jolles P. Complete amino acid sequence of a basic 21-kDa protein from bovine brain cytosol. Eur. J. Biochem. 1987, 166:333-338.
    • (1987) Eur. J. Biochem. , vol.166 , pp. 333-338
    • Schoentgen, F.1    Saccoccio, F.2    Jolles, J.3    Bernier, I.4    Jolles, P.5
  • 16
    • 19644397321 scopus 로고    scopus 로고
    • A single amino acid converts a repressor to an activator of flowering
    • Hanzawa Y., Money T., Bradley D. A single amino acid converts a repressor to an activator of flowering. Proc. Natl. Acad. Sci. U.S.A. 2005, 102:7748-7753.
    • (2005) Proc. Natl. Acad. Sci. U.S.A. , vol.102 , pp. 7748-7753
    • Hanzawa, Y.1    Money, T.2    Bradley, D.3
  • 19
    • 27744570890 scopus 로고    scopus 로고
    • Phylogenomic analysis of the PEBP gene family in cereals
    • Chardon F., Damerval C. Phylogenomic analysis of the PEBP gene family in cereals. J. Mol. Evol. 2005, 61:579-590.
    • (2005) J. Mol. Evol. , vol.61 , pp. 579-590
    • Chardon, F.1    Damerval, C.2
  • 21
  • 22
    • 0742323273 scopus 로고    scopus 로고
    • Poplar genome sequence: functional genomics in an ecologically dominant plant species
    • Brunner A.M., Busov V.B., Strauss S.H. Poplar genome sequence: functional genomics in an ecologically dominant plant species. Science 2004, 9:49-56.
    • (2004) Science , vol.9 , pp. 49-56
    • Brunner, A.M.1    Busov, V.B.2    Strauss, S.H.3
  • 23
    • 33749337523 scopus 로고    scopus 로고
    • PpAG1, a homolog of AGAMOUS, expressed in developing peach flowers and fruit
    • Martin T., Hu M., Labbeó H., McHugh S., Svircev A., Miki B. PpAG1, a homolog of AGAMOUS, expressed in developing peach flowers and fruit. Can. J. Bot. 2006, 84:767-776.
    • (2006) Can. J. Bot. , vol.84 , pp. 767-776
    • Martin, T.1    Hu, M.2    Labbeó, H.3    McHugh, S.4    Svircev, A.5    Miki, B.6
  • 24
    • 49849092284 scopus 로고    scopus 로고
    • Expression analysis and genetic mapping of three SEPALLATA-like genes from peach (Prunus persica (L.) Batsch)
    • Xu Y., Zhang L., Xie H., Zhang Y.-Q., Margarida Oliveira M., Ma R.-C. Expression analysis and genetic mapping of three SEPALLATA-like genes from peach (Prunus persica (L.) Batsch). Tree Genet. Genomes 2008, 4:693-703.
    • (2008) Tree Genet. Genomes , vol.4 , pp. 693-703
    • Xu, Y.1    Zhang, L.2    Xie, H.3    Zhang, Y.-Q.4    Margarida Oliveira, M.5    Ma, R.-C.6
  • 25
    • 44949251024 scopus 로고    scopus 로고
    • Molecular cloning, identification, and chromosomal localization of two MADS box genes in peach (Prunus persica)
    • Zhang L., Xu Y., Ma R. Molecular cloning, identification, and chromosomal localization of two MADS box genes in peach (Prunus persica). J. Genet. Genomics 2008, 35:365-372.
    • (2008) J. Genet. Genomics , vol.35 , pp. 365-372
    • Zhang, L.1    Xu, Y.2    Ma, R.3
  • 28
    • 0028254263 scopus 로고
    • Estimating nuclear DNA content in peach and related diploid species using laser flow cytometry and DNA hybridization
    • Baird W.V., Estager A.S., Wells J. Estimating nuclear DNA content in peach and related diploid species using laser flow cytometry and DNA hybridization. J. Am. Soc. Hort. Sci. 1994, 119:1312-1316.
    • (1994) J. Am. Soc. Hort. Sci. , vol.119 , pp. 1312-1316
    • Baird, W.V.1    Estager, A.S.2    Wells, J.3
  • 31
    • 0042330147 scopus 로고    scopus 로고
    • Construction and application of a bacterial artificial chromosome (BAC) library of Prunus armeniaca L. for the identification of clones linked to the self-incompatibility locus
    • Vilanova S., Romero C., Abernathy D., Abbott A.G., Burgos L., Llácer G., Badenes M.L. Construction and application of a bacterial artificial chromosome (BAC) library of Prunus armeniaca L. for the identification of clones linked to the self-incompatibility locus. Mol. Genet. Genomics 2003, 269:685-691.
    • (2003) Mol. Genet. Genomics , vol.269 , pp. 685-691
    • Vilanova, S.1    Romero, C.2    Abernathy, D.3    Abbott, A.G.4    Burgos, L.5    Llácer, G.6    Badenes, M.L.7
  • 33
    • 0006392836 scopus 로고
    • The evaluation of resistance of apricots to plum pox virus by ELISA and ISEM
    • Polák J., Komínek P., Jokes M., Oukropec I., Krska B. The evaluation of resistance of apricots to plum pox virus by ELISA and ISEM. Acta. Hort. 1995, 386:285-289.
    • (1995) Acta. Hort. , vol.386 , pp. 285-289
    • Polák, J.1    Komínek, P.2    Jokes, M.3    Oukropec, I.4    Krska, B.5
  • 34
    • 0342656994 scopus 로고    scopus 로고
    • Inheritance of resistance to plum pox potyvirus (PPV) in apricot, Prunus armeniaca
    • Dicenta F., Martínez-Gómez P., Burgos L., Egea J. Inheritance of resistance to plum pox potyvirus (PPV) in apricot, Prunus armeniaca. Plant Breed 2000, 119:161-164.
    • (2000) Plant Breed , vol.119 , pp. 161-164
    • Dicenta, F.1    Martínez-Gómez, P.2    Burgos, L.3    Egea, J.4
  • 37
    • 0032849859 scopus 로고    scopus 로고
    • CAP3: a DNA sequence assembly program
    • Huang X., Madan A. CAP3: a DNA sequence assembly program. Genome Res. 1999, 9:868-877.
    • (1999) Genome Res. , vol.9 , pp. 868-877
    • Huang, X.1    Madan, A.2
  • 38
    • 0042622334 scopus 로고    scopus 로고
    • PromH: promoter identification using orthologous genomic sequences
    • Solovyev V.V., Shahmuradov I.A. PromH: promoter identification using orthologous genomic sequences. Nucleic Acids Res. 2003, 31:3540-3545.
    • (2003) Nucleic Acids Res. , vol.31 , pp. 3540-3545
    • Solovyev, V.V.1    Shahmuradov, I.A.2
  • 39
    • 0032426005 scopus 로고    scopus 로고
    • Comparative DNA analysis across diverse genomes
    • Karlin S., Campbell A.M., Mrázek J. Comparative DNA analysis across diverse genomes. Ann. Rev. Gen. 1998, 32:185-225.
    • (1998) Ann. Rev. Gen. , vol.32 , pp. 185-225
    • Karlin, S.1    Campbell, A.M.2    Mrázek, J.3
  • 40
    • 50849131231 scopus 로고    scopus 로고
    • ACUA: a software tool for automated codon usage analysis
    • Vetrivel U., Arunkumar V., Dorairaj S. ACUA: a software tool for automated codon usage analysis. Bioinformation 2007, 2:62-63.
    • (2007) Bioinformation , vol.2 , pp. 62-63
    • Vetrivel, U.1    Arunkumar, V.2    Dorairaj, S.3
  • 41
    • 13244255415 scopus 로고    scopus 로고
    • MUSCLE: a multiple sequence alignment method with reduced time and space complexity
    • Edgar R.C. MUSCLE: a multiple sequence alignment method with reduced time and space complexity. BMC Bioinformatics 2004, 5:113.
    • (2004) BMC Bioinformatics , vol.5 , pp. 113
    • Edgar, R.C.1
  • 43
    • 0034646560 scopus 로고    scopus 로고
    • The structure of Antirrhinum centroradialis (CEN) protein suggests a role as a kinase regulator
    • Banfield M.J., Brady R.L. The structure of Antirrhinum centroradialis (CEN) protein suggests a role as a kinase regulator. J. Mol. Biol. 2000, 297:1159-1170.
    • (2000) J. Mol. Biol. , vol.297 , pp. 1159-1170
    • Banfield, M.J.1    Brady, R.L.2
  • 44
    • 0034920406 scopus 로고    scopus 로고
    • Sequence and analysis of the tomato JOINTLESS locus
    • Mao L., Begum D., Goff S.A., Wing R.A. Sequence and analysis of the tomato JOINTLESS locus. Plant Physiol. 2001, 126:1331-1340.
    • (2001) Plant Physiol. , vol.126 , pp. 1331-1340
    • Mao, L.1    Begum, D.2    Goff, S.A.3    Wing, R.A.4
  • 45
    • 0000354617 scopus 로고    scopus 로고
    • The arabidopsis genome initiative, analysis of the genome sequence of the flowering plant Arabidopsis thaliana
    • The arabidopsis genome initiative, analysis of the genome sequence of the flowering plant Arabidopsis thaliana. Nature 2000, 408:796-815.
    • (2000) Nature , vol.408 , pp. 796-815
  • 48
    • 0038586491 scopus 로고    scopus 로고
    • Comparison of peach and Arabidopsis genomic sequences: fragmentary conservation of gene neighborhoods
    • Georgi L.L., Wang Y., Reighard G.L., Mao L., Wing R.A., Abbott A.G. Comparison of peach and Arabidopsis genomic sequences: fragmentary conservation of gene neighborhoods. Genome 2003, 46:268-276.
    • (2003) Genome , vol.46 , pp. 268-276
    • Georgi, L.L.1    Wang, Y.2    Reighard, G.L.3    Mao, L.4    Wing, R.A.5    Abbott, A.G.6
  • 49
    • 58149105394 scopus 로고    scopus 로고
    • Haplotype divergence in Beta vulgaris and microsynteny with sequenced plant genomes
    • Dohm J.C., Lange C., Reinhardt R., Himmelbauer H. Haplotype divergence in Beta vulgaris and microsynteny with sequenced plant genomes. Plant J. 2009, 57:14-26.
    • (2009) Plant J. , vol.57 , pp. 14-26
    • Dohm, J.C.1    Lange, C.2    Reinhardt, R.3    Himmelbauer, H.4
  • 50
    • 51249171246 scopus 로고
    • Nuclear DNA content of some important plantspecies
    • Arumuganathan K., Earle E.D. Nuclear DNA content of some important plantspecies. Plant Mol. Biol. Rep. 1991, 9:208-218.
    • (1991) Plant Mol. Biol. Rep. , vol.9 , pp. 208-218
    • Arumuganathan, K.1    Earle, E.D.2
  • 52
    • 0035142717 scopus 로고    scopus 로고
    • Genomics and synteny
    • McCouch S.R. Genomics and synteny. Plant Physiol. 2001, 125:152-155.
    • (2001) Plant Physiol. , vol.125 , pp. 152-155
    • McCouch, S.R.1
  • 53
    • 0033891353 scopus 로고    scopus 로고
    • Extensive duplication and reshuffling in the Arabidopsis genome
    • Blanc G., Barakata A., Guyota R., Cookea R., Delseny M. Extensive duplication and reshuffling in the Arabidopsis genome. Plant Cell 2000, 12:1093-1102.
    • (2000) Plant Cell , vol.12 , pp. 1093-1102
    • Blanc, G.1    Barakata, A.2    Guyota, R.3    Cookea, R.4    Delseny, M.5
  • 54
    • 33750309690 scopus 로고    scopus 로고
    • Hormone-regulated inflorescence induction and TFL1 expression in Arabidopsis callus in vitro
    • Guan C.M., Zhu S.S., Li X.G., Zhang X.S. Hormone-regulated inflorescence induction and TFL1 expression in Arabidopsis callus in vitro. Plant Cell Rep. 2006, 25:1133-1137.
    • (2006) Plant Cell Rep. , vol.25 , pp. 1133-1137
    • Guan, C.M.1    Zhu, S.S.2    Li, X.G.3    Zhang, X.S.4
  • 55
    • 73349101415 scopus 로고    scopus 로고
    • Isolation and characterization of terminal flower1 homolog promoter from precocious trifoliata mutant (Poncirus trifoliata L. Raf.) in transgenic Arabidopsis
    • Mei L., Zhang J.Z., Li Z., Liu J., Hu C. Isolation and characterization of terminal flower1 homolog promoter from precocious trifoliata mutant (Poncirus trifoliata L. Raf.) in transgenic Arabidopsis. Biotechnol. Biotechnol. Eq. 2009, 23:1485-1488.
    • (2009) Biotechnol. Biotechnol. Eq. , vol.23 , pp. 1485-1488
    • Mei, L.1    Zhang, J.Z.2    Li, Z.3    Liu, J.4    Hu, C.5
  • 56
    • 51249101709 scopus 로고    scopus 로고
    • Characterization and expression analysis of TERMINAL FLOWER 1 homologs from cultivated alloteraploid cotton (Gossypium hirsutum) and its diploid progenitors
    • Argirioua A., Michailidisa G., Tsaftarisa S. Characterization and expression analysis of TERMINAL FLOWER 1 homologs from cultivated alloteraploid cotton (Gossypium hirsutum) and its diploid progenitors. J. Plant Physiol. 2008, 165:1636-1646.
    • (2008) J. Plant Physiol. , vol.165 , pp. 1636-1646
    • Argirioua, A.1    Michailidisa, G.2    Tsaftarisa, S.3
  • 57
    • 0036682524 scopus 로고    scopus 로고
    • Phytochrome mediates the external light signal to repress FT orthologs in photoperiodic flowering of rice
    • Izawa T., Oikawa T., Sugiyama N., Tanisaka T., Yano M., Shimamoto K. Phytochrome mediates the external light signal to repress FT orthologs in photoperiodic flowering of rice. Genes Dev. 2002, 16:2006-2020.
    • (2002) Genes Dev. , vol.16 , pp. 2006-2020
    • Izawa, T.1    Oikawa, T.2    Sugiyama, N.3    Tanisaka, T.4    Yano, M.5    Shimamoto, K.6
  • 58
    • 0034724421 scopus 로고    scopus 로고
    • The molecular basis of vernalization: the central role of FLOWERING LOCUS C (FLC)
    • Sheldon C.C., Rouse D.T., Finnegan E.J., Peacock W.J., Dennis E.S. The molecular basis of vernalization: the central role of FLOWERING LOCUS C (FLC). PNAS 2000, 97:3753-3758.
    • (2000) PNAS , vol.97 , pp. 3753-3758
    • Sheldon, C.C.1    Rouse, D.T.2    Finnegan, E.J.3    Peacock, W.J.4    Dennis, E.S.5
  • 59
    • 33746292110 scopus 로고    scopus 로고
    • Genome-wide analysis of the MADS-box gene family in Populus trichocarpa
    • Leseberg C.H., Li A., Kang H., Duvall M., Mao L. Genome-wide analysis of the MADS-box gene family in Populus trichocarpa. Gene 2006, 378:84-94.
    • (2006) Gene , vol.378 , pp. 84-94
    • Leseberg, C.H.1    Li, A.2    Kang, H.3    Duvall, M.4    Mao, L.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.