-
1
-
-
0025979877
-
Targeting, disruption, replacement, and allele rescue: Integrative DNA transformation in yeast
-
Rothstein R (1991) Targeting, disruption, replacement, and allele rescue: Integrative DNA transformation in yeast. Methods Enzymol 194:281-301.
-
(1991)
Methods Enzymol
, vol.194
, pp. 281-301
-
-
Rothstein, R.1
-
2
-
-
0024328536
-
Altering the genome by homologous recombination
-
Capecchi MR (1989) Altering the genome by homologous recombination. Science 244:1288-1292.
-
(1989)
Science
, vol.244
, pp. 1288-1292
-
-
Capecchi, M.R.1
-
3
-
-
0035544402
-
Gene targeting in Arabidopsis
-
Hanin M, et al. (2001) Gene targeting in Arabidopsis. Plant J 28:671-677.
-
(2001)
Plant J
, vol.28
, pp. 671-677
-
-
Hanin, M.1
-
4
-
-
0036787546
-
Efficient gene targeting by homologous recombination in rice
-
Terada R, Urawa H, Inagaki Y, Tsugane K, Iida S (2002) Efficient gene targeting by homologous recombination in rice. Nat Biotechnol 20:1030-1034.
-
(2002)
Nat Biotechnol
, vol.20
, pp. 1030-1034
-
-
Terada, R.1
Urawa, H.2
Inagaki, Y.3
Tsugane, K.4
Iida, S.5
-
5
-
-
33645706715
-
Molecular characterization of true and ectopic gene targeting events at the acetolactate synthase gene in Arabidopsis
-
Endo M, Osakabe K, Ichikawa H, Toki S (2006) Molecular characterization of true and ectopic gene targeting events at the acetolactate synthase gene in Arabidopsis. Plant Cell Physiol 47:372-379.
-
(2006)
Plant Cell Physiol
, vol.47
, pp. 372-379
-
-
Endo, M.1
Osakabe, K.2
Ichikawa, H.3
Toki, S.4
-
6
-
-
34748901919
-
Molecular breeding of a novel herbicide-tolerant rice by gene targeting
-
DOI 10.1111/j.1365-313X.2007.03230.x
-
Endo M, et al. (2007) Molecular breeding of a novel herbicide-tolerant rice by gene targeting. Plant J 52:157-166. (Pubitemid 47476172)
-
(2007)
Plant Journal
, vol.52
, Issue.1
, pp. 157-166
-
-
Endo, M.1
Osakabe, K.2
Ono, K.3
Handa, H.4
Shimizu, T.5
Toki, S.6
-
7
-
-
34250620130
-
Gene targeting by homologous recombination as a biotechnological tool for rice functional genomics
-
DOI 10.1104/pp.107.095992
-
Terada R, Johzuka-Hisatomi Y, Saitoh M, Asao H, Iida S (2007) Gene targeting by homologous recombination as a biotechnological tool for rice functional genomics. Plant Physiol 144:846-856. (Pubitemid 46944748)
-
(2007)
Plant Physiology
, vol.144
, Issue.2
, pp. 846-856
-
-
Terada, R.1
Johzuka-Hisatomi, Y.2
Saitoh, M.3
Asao, H.4
Iida, S.5
-
8
-
-
0036777168
-
Homologous recombination: Ends as the means
-
Ray A, Langer M (2002) Homologous recombination: Ends as the means. Trends Plant Sci 7:435-440.
-
(2002)
Trends Plant Sci
, vol.7
, pp. 435-440
-
-
Ray, A.1
Langer, M.2
-
9
-
-
0013187276
-
Re-engineering plant gene targeting
-
Britt AB, May GD (2003) Re-engineering plant gene targeting. Trends Plant Sci 8:90-95.
-
(2003)
Trends Plant Sci
, vol.8
, pp. 90-95
-
-
Britt, A.B.1
May, G.D.2
-
10
-
-
0033057606
-
How plants make ends meet: DNA double-strand break repair
-
Gorbunova VV, V, Levy AA (1999) How plants make ends meet: DNA double-strand break repair. Trends Plant Sci 4:263-269.
-
(1999)
Trends Plant Sci
, vol.4
, pp. 263-269
-
-
Gorbunova V, V.V.1
Levy, A.A.2
-
11
-
-
0032996559
-
Molecular genetics of DNA repair in higher plants
-
DOI 10.1016/S1360-1385(98)01355-7
-
Britt AB (1999) Molecular genetics of DNA repair in higher plants. Trends Plant Sci 4:20-25. (Pubitemid 29130800)
-
(1999)
Trends in Plant Science
, vol.4
, Issue.1
, pp. 20-25
-
-
Britt, A.B.1
-
12
-
-
0034675997
-
Species-specific double-strand break repair and genome evolution in plants
-
Kirik A, Salomon S, Puchta H (2000) Species-specific double-strand break repair and genome evolution in plants. EMBO J 19:5562-5566.
-
(2000)
EMBO J
, vol.19
, pp. 5562-5566
-
-
Kirik, A.1
Salomon, S.2
Puchta, H.3
-
14
-
-
45749145124
-
Zinc-finger nucleases: The next generation emerges
-
DOI 10.1038/mt.2008.114, PII MT2008114
-
Cathomen T, Joung JK (2008) Zinc-finger nucleases: The next generation emerges. Mol Ther 16:1200-1207. (Pubitemid 351866050)
-
(2008)
Molecular Therapy
, vol.16
, Issue.7
, pp. 1200-1207
-
-
Cathomen, T.1
Keith Joung, J.2
-
15
-
-
13844319542
-
Targeted mutagenesis using zinc-finger nucleases in Arabidopsis
-
DOI 10.1073/pnas.0409339102
-
Lloyd A, Plaisier CL, Carroll D, Drews GN (2005) Targeted mutagenesis using zincfinger nucleases in Arabidopsis. Proc Natl Acad Sci USA 102:2232-2237. (Pubitemid 40262041)
-
(2005)
Proceedings of the National Academy of Sciences of the United States of America
, vol.102
, Issue.6
, pp. 2232-2237
-
-
Lloyd, A.1
Plaisier, C.L.2
Carroll, D.3
Drews, G.N.4
-
16
-
-
44949155482
-
Heritable targeted gene disruption in zebrafish using designed zinc-finger nucleases
-
Doyon Y, et al. (2008) Heritable targeted gene disruption in zebrafish using designed zinc-finger nucleases. Nat Biotechnol 26:702-708.
-
(2008)
Nat Biotechnol
, vol.26
, pp. 702-708
-
-
Doyon, Y.1
-
17
-
-
44949162060
-
Targeted gene inactivation in zebrafish using engineered zinc-finger nucleases
-
DOI 10.1038/nbt1398, PII NBT1398
-
Meng X, Noyes MB, Zhu LJ, Lawson ND, Wolfe SA (2008) Targeted gene inactivation in zebrafish using engineered zinc-finger nucleases. Nat Biotechnol 26:695-701. (Pubitemid 351809594)
-
(2008)
Nature Biotechnology
, vol.26
, Issue.6
, pp. 695-701
-
-
Meng, X.1
Noyes, M.B.2
Zhu, L.J.3
Lawson, N.D.4
Wolfe, S.A.5
-
18
-
-
58149374562
-
Efficient gene targeting in Drosophila by direct embryo injection with zinc-finger nucleases
-
Beumer KJ, et al. (2008) Efficient gene targeting in Drosophila by direct embryo injection with zinc-finger nucleases. Proc Natl Acad Sci USA 105:19821-19826.
-
(2008)
Proc Natl Acad Sci USA
, vol.105
, pp. 19821-19826
-
-
Beumer, K.J.1
-
19
-
-
44449120801
-
Targeted gene knockout in mammalian cells by using engineered zinc-finger nucleases
-
DOI 10.1073/pnas.0800940105
-
Santiago Y, et al. (2008) Targeted gene knockout in mammalian cells by using engineered zinc-finger nucleases. Proc Natl Acad Sci USA 105:5809-5814. (Pubitemid 351758454)
-
(2008)
Proceedings of the National Academy of Sciences of the United States of America
, vol.105
, Issue.15
, pp. 5809-5814
-
-
Santiago, Y.1
Chan, E.2
Liu, P.-Q.3
Orlando, S.4
Zhang, L.5
Urnov, F.D.6
Holmes, M.C.7
Guschin, D.8
Waite, A.9
Miller, J.C.10
Rebar, E.J.11
Gregory, P.D.12
Klug, A.13
Collingwood, T.N.14
-
20
-
-
66249147273
-
Precise genome modification in the crop species Zea mays using zinc-finger nucleases
-
Shukla VK, et al. (2009) Precise genome modification in the crop species Zea mays using zinc-finger nucleases. Nature 459:437-441.
-
(2009)
Nature
, vol.459
, pp. 437-441
-
-
Shukla, V.K.1
-
21
-
-
66249093890
-
High-frequency modification of plant genes using engineered zinc-finger nucleases
-
Townsend JA, et al. (2009) High-frequency modification of plant genes using engineered zinc-finger nucleases. Nature 459:442-445.
-
(2009)
Nature
, vol.459
, pp. 442-445
-
-
Townsend, J.A.1
-
22
-
-
0034283804
-
Requirements for double-strand cleavage by chimeric restriction enzymes with zinc finger DNA-recognition domains
-
Smith J, et al. (2000) Requirements for double-strand cleavage by chimeric restriction enzymes with zinc finger DNA-recognition domains. Nucleic Acids Res 28:3361-3369. (Pubitemid 30662302)
-
(2000)
Nucleic Acids Research
, vol.28
, Issue.17
, pp. 3361-3369
-
-
Smith, J.1
Bibikova, M.2
Whitby, F.G.3
Reddy, A.R.4
Chandrasegaran, S.5
Carroll, D.6
-
23
-
-
3643131214
-
The arabidopsis abscisic acid response locus ABI4 encodes an APETALA2 domain protein
-
DOI 10.1105/tpc.10.6.1043
-
Finkelstein RR, Wang ML, Lynch TJ, Rao S, Goodman HM (1998) The Arabidopsis abscisic acid response locus ABI4 encodes an APETALA 2 domain protein. Plant Cell 10:1043-1054. (Pubitemid 28537427)
-
(1998)
Plant Cell
, vol.10
, Issue.6
, pp. 1043-1054
-
-
Finkelstein, R.R.1
Li Wang, M.2
Lynch, T.J.3
Rao, S.4
Goodman, H.M.5
-
24
-
-
34547495865
-
Perception and transduction of abscisic acid signals: Keys to the function of the versatile plant hormone ABA
-
DOI 10.1016/j.tplants.2007.06.013, PII S1360138507001549
-
Hirayama T, Shinozaki K (2007) Perception and transduction of abscisic acid signals: Keys to the function of the versatile plant hormone ABA. Trends Plant Sci 12:343-351. (Pubitemid 47187747)
-
(2007)
Trends in Plant Science
, vol.12
, Issue.8
, pp. 343-351
-
-
Hirayama, T.1
Shinozaki, K.2
-
25
-
-
0037040240
-
Validated zinc finger protein designs for all 16 GNN DNA triplet targets
-
DOI 10.1074/jbc.M110669200
-
Liu Q, Xia Z, Zhong X, Case CC (2002) Validated zinc finger protein designs for all 16 GNN DNA triplet targets. J Biol Chem 277:3850-3856. (Pubitemid 34968635)
-
(2002)
Journal of Biological Chemistry
, vol.277
, Issue.6
, pp. 3850-3856
-
-
Liu, Q.1
Xia, Z.2
Case, C.C.3
-
26
-
-
0032981699
-
Toward controlling gene expression at will: Selection and design of zinc finger domains recognizing each of the 5'-GNN-3' DNA target sequences
-
DOI 10.1073/pnas.96.6.2758
-
Segal DJ, Dreier B, Beerli RR, Barbas CF, 3rd (1999) Toward controlling gene expression at will: Selection and design of zinc finger domains recognizing each of the 5′-GNN-3′ DNA target sequences. Proc Natl Acad Sci USA 96:2758-2763. (Pubitemid 29148791)
-
(1999)
Proceedings of the National Academy of Sciences of the United States of America
, vol.96
, Issue.6
, pp. 2758-2763
-
-
Segal, D.J.1
Dreier, B.2
Beerli, R.R.3
Barbas III, C.F.4
-
27
-
-
0035005706
-
The 'cleavage' activities of foot-and-mouth disease virus 2A site-directed mutants and naturally occurring '2A-like' sequences
-
Donnelly ML, et al. (2001) The 'cleavage' activities of foot-and-mouth disease virus 2A site-directed mutants and naturally occurring '2A-like' sequences. J Gen Virol 82:1027-1041.
-
(2001)
J Gen Virol
, vol.82
, pp. 1027-1041
-
-
Donnelly, M.L.1
-
28
-
-
0000729112
-
The Arabidopsis HSP18.2 promoter/GUS gene fusion in transgenic Arabidopsis plants: A powerful tool for the isolation of regulatory mutants of the heat-shock response
-
Takahashi T, Naito S, Komeda Y (1992) The Arabidopsis HSP18.2 promoter/GUS gene fusion in transgenic Arabidopsis plants: A powerful tool for the isolation of regulatory mutants of the heat-shock response. Plant J 2:751-761.
-
(1992)
Plant J
, vol.2
, pp. 751-761
-
-
Takahashi, T.1
Naito, S.2
Komeda, Y.3
-
29
-
-
30344473645
-
Mammalian gene targeting with designed zinc finger nucleases
-
Porteus MH (2006) Mammalian gene targeting with designed zinc finger nucleases. Mol Ther 13:438-446.
-
(2006)
Mol Ther
, vol.13
, pp. 438-446
-
-
Porteus, M.H.1
-
30
-
-
0036007028
-
ABA and sugar interactions regulating development: Cross-talk or voices in a crowd?
-
Finkelstein RR, Gibson SI (2002) ABA and sugar interactions regulating development: Cross-talk or voices in a crowd? Curr Opin Plant Biol 5:26-32.
-
(2002)
Curr Opin Plant Biol
, vol.5
, pp. 26-32
-
-
Finkelstein, R.R.1
Gibson, S.I.2
-
31
-
-
0034870221
-
Genetic interactions between ABA, ethylene and sugar signaling pathways
-
DOI 10.1016/S1369-5266(00)00190-4
-
Gazzarrini S, McCourt P (2001) Genetic interactions between ABA, ethylene and sugar signaling pathways. Curr Opin Plant Biol 4:387-391. (Pubitemid 32792553)
-
(2001)
Current Opinion in Plant Biology
, vol.4
, Issue.5
, pp. 387-391
-
-
Gazzarrini, S.1
McCourt, P.2
-
32
-
-
0038050771
-
Sugar and hormone connections
-
León P, Sheen J (2003) Sugar and hormone connections. Trends Plant Sci 8:110-116.
-
(2003)
Trends Plant Sci
, vol.8
, pp. 110-116
-
-
León, P.1
Sheen, J.2
-
33
-
-
0036690874
-
Disruption of the Arabidopsis AtKu80 gene demonstrates an essential role for AtKu80 protein in efficient repair of DNA double-strand breaks in vivo
-
West CE, et al. (2002) Disruption of the Arabidopsis AtKu80 gene demonstrates an essential role for AtKu80 protein in efficient repair of DNA double-strand breaks in vivo. Plant J 31:517-528.
-
(2002)
Plant J
, vol.31
, pp. 517-528
-
-
West, C.E.1
-
34
-
-
47349097567
-
Rapid "open-source" engineering of customized zinc-finger nucleases for highly efficient gene modification
-
Maeder ML, et al. (2008) Rapid "open-source" engineering of customized zinc-finger nucleases for highly efficient gene modification. Mol Cell 31:294-301.
-
(2008)
Mol Cell
, vol.31
, pp. 294-301
-
-
Maeder, M.L.1
-
35
-
-
43349088569
-
Distinct roles of XRCC4 and Ku80 in non-homologous end-joining of endonuclease- And ionizing radiation-induced DNA double-strand breaks
-
DOI 10.1093/nar/gkn094
-
Schulte-Uentrop L, El-Awady RA, Schliecker L, Willers H, Dahm-Daphi J (2008) Distinct roles of XRCC4 and Ku80 in non-homologous end-joining of endonuclease- and ionizing radiation-induced DNA double-strand breaks. Nucleic Acids Res 36:2561-2569. (Pubitemid 351659571)
-
(2008)
Nucleic Acids Research
, vol.36
, Issue.8
, pp. 2561-2569
-
-
Schulte-Uentrop, L.1
El-Awady, R.A.2
Schliecker, L.3
Willers, H.4
Dahm-Daphi, J.5
-
36
-
-
33845657443
-
PARP-1 and Ku compete for repair of DNA double strand breaks by distinct NHEJ pathways
-
DOI 10.1093/nar/gkl840
-
Wang M, et al. (2006) PARP-1 and Ku compete for repair of DNA double strand breaks by distinct NHEJ pathways. Nucleic Acids Res 34:6170-6182. (Pubitemid 44942738)
-
(2006)
Nucleic Acids Research
, vol.34
, Issue.21
, pp. 6170-6182
-
-
Wang, M.1
Wu, W.2
Wu, W.3
Rosidi, B.4
Zhang, L.5
Wang, H.6
Iliakis, G.7
-
37
-
-
67651160883
-
DNA ligase 1 deficient plants display severe growth defects and delayed repair of both DNA single and double strand breaks
-
Waterworth WM, et al. (2009) DNA ligase 1 deficient plants display severe growth defects and delayed repair of both DNA single and double strand breaks. BMC Plant Biol 9:79.
-
(2009)
BMC Plant Biol
, vol.9
, pp. 79
-
-
Waterworth, W.M.1
-
38
-
-
54849404458
-
MMEJ repair of double-strand breaks (director's cut): Deleted sequences and alternative endings
-
McVey M, Lee SE (2008) MMEJ repair of double-strand breaks (director's cut): Deleted sequences and alternative endings. Trends Genet 24:529-538.
-
(2008)
Trends Genet
, vol.24
, pp. 529-538
-
-
McVey, M.1
Lee, S.E.2
-
39
-
-
0042991423
-
Competition between the Rad50 complex and the Ku heterodimer reveals a role for exo1 in processing double-strand breaks but not telomeres
-
DOI 10.1128/MCB.23.15.5186-5197.2003
-
Tomita K, et al. (2003) Competition between the Rad50 complex and the Ku heterodimer reveals a role for Exo1 in processing double-strand breaks but not telomeres. Mol Cell Biol 23:5186-5197. (Pubitemid 36950874)
-
(2003)
Molecular and Cellular Biology
, vol.23
, Issue.15
, pp. 5186-5197
-
-
Tomita, K.1
Matsuura, A.2
Caspari, T.3
Carr, A.M.4
Akamatsu, Y.5
Iwasaki, H.6
Mizuno, K.-I.7
Ohta, K.8
Uritani, M.9
Ushimaru, T.10
Yoshinaga, K.11
Ueno, M.12
-
40
-
-
70350418861
-
Bloom DNA helicase facilitates homologous recombination between diverged homologous sequences
-
Kikuchi K, et al. (2009) Bloom DNA helicase facilitates homologous recombination between diverged homologous sequences. J Biol Chem 284:26360-26367.
-
(2009)
J Biol Chem
, vol.284
, pp. 26360-26367
-
-
Kikuchi, K.1
-
41
-
-
34248220864
-
Standardized reagents and protocols for engineering zinc finger nucleases by modular assembly
-
Wright DA, et al. (2006) Standardized reagents and protocols for engineering zinc finger nucleases by modular assembly. Nat Protoc 1:1637-1652.
-
(2006)
Nat Protoc
, vol.1
, pp. 1637-1652
-
-
Wright, D.A.1
-
42
-
-
0032447801
-
Floral dip: A simplified method for Agrobacterium-mediated transformation of Arabidopsis thaliana
-
Clough SJ, Bent AF (1998) Floral dip: A simplified method for Agrobacteriummediated transformation of Arabidopsis thaliana. Plant J 16:735-743. (Pubitemid 128418620)
-
(1998)
Plant Journal
, vol.16
, Issue.6
, pp. 735-743
-
-
Clough, S.J.1
Bent, A.F.2
-
43
-
-
33645368561
-
A fluorescent antibiotic resistance marker for rapid production of transgenic rice plants
-
Ochiai-Fukuda T, et al. (2006) A fluorescent antibiotic resistance marker for rapid production of transgenic rice plants. J Biotechnol 122:521-527.
-
(2006)
J Biotechnol
, vol.122
, pp. 521-527
-
-
Ochiai-Fukuda, T.1
-
44
-
-
29544438751
-
Leucine-rich repeat receptor-like kinase1 is a key membranebound regulator of abscisic acid early signaling in Arabidopsis
-
Osakabe Y, et al. (2005) Leucine-rich repeat receptor-like kinase1 is a key membranebound regulator of abscisic acid early signaling in Arabidopsis. Plant Cell 17:1105-1119.
-
(2005)
Plant Cell
, vol.17
, pp. 1105-1119
-
-
Osakabe, Y.1
-
45
-
-
0034664087
-
Analysis of Arabidopsis glucose insensitive mutants, gin5 and gin6, reveals a central role of the plant hormone ABA in the regulation of plant vegetative development by sugar
-
Arenas-Huertero F, Arroyo A, Zhou L, Sheen J, León P (2000) Analysis of Arabidopsis glucose insensitive mutants, gin5 and gin6, reveals a central role of the plant hormone ABA in the regulation of plant vegetative development by sugar. Genes Dev 14:2085-2096.
-
(2000)
Genes Dev
, vol.14
, pp. 2085-2096
-
-
Arenas-Huertero, F.1
Arroyo, A.2
Zhou, L.3
Sheen, J.4
León, P.5
|