Genes related to economically important traits in beef cattle

Asian Journal of Animal Sciences

Volumn 5, Issue 1, 2011, Pages 34-45

  Hirway, Claire D'Andre ^a   Wallace, Paul ^a   Shen, Xu ^a   Nie, Qinghua ^a   Yang, Guanfu ^a   Zhang, Xiquan ^a  

^a SOUTH CHINA AGRICULTURAL UNIVERSITY   (China)

Author keywords

Genes; Genetic improvement; Meat genes beef; Metabolism

Indexed keywords

ANIMALIA; BOS;

EID: 77955150428     PISSN: 18191878     EISSN: None     Source Type: Journal    
DOI: 10.3923/ajas.2011.34.45     Document Type: Article

References (72)

1. Abe, T., J. Saburi, H. Hasebe, T. Nakagawa and T. Kawamura et al., 2008. Bovine QTL analysisfor growth, carcass and meat quality traits in an F2 population from a cross between JapaneseBlack and Limousin. J. Anim. Sci., 86: 2821-2832.
2. Akerblad, P., U. Lmd, D. Liberg, K. Bamberg and M. Sigvardsson, 2002. Early B-cell factor (O/E-l)is a promoter of adipogenesis and involved in control of genes important for terminal adipocytedifferentiation. Mol. Cell. Biol, 22: 8015-8025.
3. Barendse, W., B.E. Harrison, R.J. Hawken, D.M. Ferguson, J.M. Thompson, M.B. Thomas and R. J. Bunch, 2007a. Epistasis between calpain 1 and its inhibitor calpastatin within breeds ofcattle. Genetics, 176: 2601-2610.
4. Barendse, W., Bunch, R.J. J.W. Kijas and M.B. Thomas, 2007b. The effect of genetic variationof the retinoic acid receptor-related orphan receptor C gene on fatness in cattle. Genetics,175: 843-853.
5. Barendse, W.J., 1999. Assessing hpid metabolism. Int. Pat. Appl. PCT/AU98/00882, Int. Pat. Publ.WO 99/23248. http://www.wipo.int/pctdb/en/wo.jsp?wo=1999023248.
6. Bauman, D.E., B.A. Corl, L.H. Baumgard and J.M. Griinar, 1998. Trans fatty acids, conjugatedlinoleic acid and milk fat synthesis. Proceedings of the Cornell Nutrition Conference, 1998,Syracuse, NY., pp: 95-103.
7. Belury, M.A., A. Mahon and S. Banni, 2003. The conjugated linoleic acid (CLA) isomer,tl0cl2-CLA, is inversely associated with changes in body weight and serum leptin in subjectswith type 2 diabetes melhtus. J. Nutr., 133: 257S-260S.
8. Bennett, M.K., Y.K. Seo, S. Datta, D.J. Shm and T.F. Osborne, 2008. Selective binding of sterolregulatory element-binding protein isoforms and co-regulatory proteins to promoters for lipidmetabolic genes in liver. J. Biol. Chem., 283: 15628-15637.
9. Bionaz, M. and J. Loor Juan, 2008. Gene networks driving bovine milk fat synthesis during thelactation cycle. BMC Genomics, 9: 366-366.
10. Buchanan, F.C., C.J. Fitzsimmons, A.G. van Kessel, T.D. Thue, D.C.W. Sim and S.M. Schmutz,2002. Association of a missense mutation in the bovine leptin gene with carcass fat content andleptin mRNA levels. Genet. Sel. Evol, 34: 105-116.
11. Buchanan, F.C.,T. D. Thue, P. Yu and D.C. Winkelman-Sim, 2005. Single nucleotidepolymorphisms in the corticotrophin-releasing hormone and pro-opiomelancortin genes areassociated with growth and carcass yield in beef cattle. Anim. Genet., 36: 127-131.
12. Casas, E., S.N. White, T.L. Wheeler, S.D. Shackelford, M. Koohmaraie and D.G Riley, 2006.Effects of calpastatin and micro-calpain markers in beef cattle on tenderness traits. J. Anim.Sci, 84: 520-525.
13. Clark, R.B., D. Bishop-Bailey, T. Estrada-Hernandez, T. Hla, L. Puddington and S.J. Padula, 2000.The nuclear receptor PPAR and immunoregulation: PPAR mediates inhibition of helper T cellresponses. J. Immunol., 164: 1364-1371.
14. Conte, G., M. Mele, B. Castiglioni, A. Serra and M. Viva et al., 2006. Relationship between bovineSCD polymorphism locus and mammary gland desaturation activity. Proceedings of the 8thWorld Congress on Genetics Applied to Livestock Production, Aug. 13-18, Belo Horizonte,Minas Gerais, Brazil, pp: 22-37.
15. Cunningham, M.J., D.K. Clifton and R. A. Steuner, 1999. Leptin's actions on the reproductive axis:Perspective and mechanisms. Biol. Reprod., 60: 216-222.
16. De Smet, S., K. Raes, D. Demeyer, 2004. Meat fatty acid composition as affected by fatness andgenetic factors: A review. Anim. Res., 53: 81-98.
17. De-Roos, A.P.W., C. Schrooten, E. Mullaart, M.P.L. Calus and R.F. Veerkamp, 2007. Breedingvalue estimation for fat percentage using dense markers on Bos taurus autosome 14. J. DairySci, 90: 4821-4829.
18. Delavaud, C, A. Ferlay, Y. Faulconnier, F. Bocquier, G. Kann and Y. Chilliard, 2002. Plasmaleptin concentration in adult cattle: Effects of breed, adiposity, feeding level and meal intake.J. Anim. Sci., 80: 1317-1328.
19. D'Andre Hirwa. C, W. Paul, W. Yan, C. Luo, Q. Nie, G Yang and X. Zhang, 2009. Allehcfrequency in chicken thyroid hormone responsive spot 14 alfa gene (THRSPa). Asian J. Anim.Sciences, 3: 85-91.
20. Escher, P. and W. Wahli, 2000. Peroxisome proliferator-activated receptors: insights into multiplecellular functions. Mutat. Res., 448: 121-123.
21. Goll, D.E., V.F. Thompson, H. Li, W. Wei and J. Cong, 2005. The calpain system. Physiol. Rev.,83: 731-801.
22. Graugnard, D.E., P. Piantoni, M. Bionaz, L.L. Berger, D.B. Faulkner and J.J. Loor, 2009. Adipogenic and energy metabolism gene networks in longissimus lumborum during rapid post-weaning growth in Angus and Angus x Simmental cattle fed high- or low-starch diets. BMCGenomics, 10: 142-142.
23. Grimaldi, P.A., 2001. The roles of PPARs in adipocyte differentiation. Progr. Lipid Res.,40: 269-281.
24. Houseknecht, K.L., C.A. Baile, R.L. Matteri and M.E. Spurlock, 1998. The biology of leptin: Areview. J. Anim. Sci., 76: 1405-1420.
25. Ji, S., G.M. Willis, R.R. Scott and M.E. Spurlock, 1998. Partial cloning and expression of the bovineleptin gene. Anim. Biotechnol., 9: 1-14.
26. Jiang, Z, J.J. Michal, D.J. Tobey, T.F. Daniels, D.C. Rule and M.D. MacNeil, 2008. Significantassociations of stearoyl-CoA desaturase (SCD1) gene with fat deposition and composition inskeletal muscle. Int. J. Biol. Sci., 4: 345-351.
27. Joel, T.M, P.P. Jonathan, A.M. Vincent, T.K. Mohandas and B.K. William, 1998. The Spot 14 generesides on the telemetric end of the llql3 ampricon and is expressed in lopogenic breastcancers. Imprication Control Tumor Metab., 95: 6989-6994.
28. Kadegowda, A.K.G., M. Bionaz, L.S. Piperova, R.A. Erdman and J.J. Loor, 2008. Lipogenic geneexpression in MAC-T cells is affected differently by fatty acids and enhanced by PPAR-gammaactivation. J. Dairy Sci., 91: 678-678.
29. Kaupe, B., H. Brandt, E.M. Prinzenberg and G. Erhardt, 2007. Joint analysis of the influence ofCYP11B1 and DGAT1 genetic variation on milk production, somatic cell score, conformation,reproduction and productive lifespan in German Holstein cattle. J. Anim. Sci., 85: 11-21.
30. Koohmaraie, M., 1992. The role of Ca(2+)-dependent proteases (calpains) in post mortem proteolysisand meat tenderness. Biochimie, 74: 239-245.
31. Kuhn, C, G. Thaller, A. Winter, O.R.P. Bininda-Emonds and B. Kaupe et al., 2004. Evidence formultiple alleles at the DGAT1 locus better explains a quantitative trait locus with major effecton milk fat content in cattle. Genetics, 167: 1873-1881.
32. Larsson, H., S. Elmstahl, G. Berglund and B. Ahren, 1998. Evidence for leptin regulation of foodintake in humans. J. Clin. Endocrine!. Metab., 83: 4382-4385.
33. Law, R.E., S. Goetze, X.P. Xi, S. Jackson and Y. Kawano et al., 2000. Expression and function ofPPAR in rat and human vascular smooth muscle cells. Circulation, 101: 1311-1318.
34. Lee, S.H, Y.M. Cho, S.H. Lee, B.S. Kim and N.K. Kim et al, 2008. Identification of marbling-related candidate genes in M,longissimus dorsi of high and low marbledHanwoo(Korean Native Cattle) steers. BMB Rep, 41: 846-851.
35. Lee, S.M, Y.H. Jeoung, S.H. Hwang, H.Y. Park and D.H. Yoon et al, 2005. Differentiation ofHanwoo intramuscular preadipocytes. J. Anim. Sci. Technol, 47: 913-918.
36. Lehnert, S.A, A.A. Reverter, K.A. Byrne, Y. Wang, G.S. Nattrass, N.J. Hudson and P.L. Greenwood, 2007. Gene expression studies of developing bovine longissimus muscle from2 different beef cattle breeds. BMC Dev. Biol, 7: 1-13.
37. Lord, G.M, G. Matarese, J.K. Howard, R.J. Baker, S.R. Bloom and R.I. Lechler, 1998. Leptinmodulates the T-cell immune response and reverses starvation-induced immunosuppression.Nature, 394:897-901.
38. McGuire, M. and M. McGuire, 2000. Conjugated Linoleic Acid (CLA): A ruminant fatty acid withbeneficial effects on human health. J. Anim. Sci, 77: 1-8.
39. Michal, J.J, Z.W. Zhang, C.T. Gaskins and Z. Jiang, 2006. The bovine fatty acid binding protein4 gene is significantly associated with marbling and subcutaneous fat depth in Wagyu xLimousin F2 crosses Anim. Genet, 37: 400-402.
40. Milanesi, E, L. Nicoloso and P. Crepaldi, 2007. Stearoyl CoA desaturase (SCD) gene polymorphismsin Italian cattle breeds. J. Anim. Breed. Genet, 125: 63-67.
41. Miyazaki, M. and J.M. Ntambi, 2003. Role of stearoyl-coenzyme a desaturase in lipid metabolism.Prostaglandins Leukot Essent Fatty Acids, 68: 113-121.
42. Moloney, A.P, M.T. Mooney, J.P. Kouryand D.J. Troy, 2001. Producing tender and flavor somebeef with enhanced nutritional characteristics. Proc. Nutr. Soc, 60: 221-229.
43. Moore, S.S, C. Li, J. Basarab, W.M. Snelling and J. Kneeland et al, 2003. Fine mapping ofquantitative trait loci and assessment of positional candidate genes for backfat on bovinechromosome 14 in a commercial line of Bos tausus. J. Anim. Sci, 81: 1919-1925.
44. Morris, C.A, N.G. Cullen, S.M. Hickey, P.M. Dobbie, B.A. Veenvhet and T.R. Manley, 2006.Genotypic effects of calpain 1 and calpastatin on the tenderness of cooked M. longissimus dorsisteaks from JerseyxLimousin, Angus and Hereford-cross cattle. Anim. Genet, 37: 411-414.
45. Mullen, A.M., P.C. Stapleton, D. Corcoran, R.M. Hamill and A. White, 2006. Understanding meatquality through the application of genomic and proteomic approaches. Meat Sci, 74: 3-16.
46. Nie, Q, H. Zeng, M. Lei, N.A. Ishag, M. Fang, B. Sun, G. Yang and X. Zhang, 2004. Genomicorganisation of the chicken ghrelin gene and its single nucleotide polymorphisms detected bydenaturing high-performance liquid chromatography. Br. Poult. Sci, 45: 611-618.
47. Nie, Q, B. Sun, D. Zhang, C. Luo and N.A. Ishag et al, 2005a. High diversity of the chickengrowth hormone gene and effects on growth and carcass traits. J. Hered, 96: 698-703.
48. Nie, Q, M. Lei, J. Ouyang, H. Zeng, G. Yang and X. Zhang, 2005b. Identification single nucleotidepolymorphisms in 12 chicken Genet. Selective Evolut, 37: 339-360.
49. Nkrumah, J.D, C. Li, J.A. Basarab, S. Guercio and Y. Meng et al, 2004. Association of a singlenucleotide polymorphism in the bovine leptin gene with feed intake, growth, feed efficiency,feeding behaviour and carcass merit. Can. J. Anim. Sci, 84: 211-219.
50. Nkrumah, J.D., C. Lil, D.H. Keisler, E.L. Sherman and Z. Wang et al., 2006. Polymorphisms inthe leptin gene and their associations with performance, feed efficiency and carcass merit ofbeef cattle. Proceedings of the 8th World Congress on Genetics Applied to Livestock Production,Aug. 13-18, Belo Honzonte, MG, Brasil, pp: 1-4.
51. Pannier, L., T.Y. Sweene, R.M. Hamill, F. Ipek, P.C. Stapleton and A.M. Mullen, 2009. Lack of anassociation between single nucleotide polymorphisms in the bovine leptin gene andintramuscular fat in Bos taurus cattle. Meat Sci., 81: 731-737.
52. Pannier, L., A.M. Mullen, R.M. Hamill, P.C. Stapleton and T. Sweeney, 2010. Association analysisof single nucleotide polymorphisms in DGAT1, TG and FABP4 genes and intramuscular fat incrossbred Bos taurus cattle. Meat Sci., 85: 515-518.
53. Pethick, D.W., G.S. Harper and V.H. Oddy, 2004. Growth, development and nutritionalmanipulation of marbling in cattle: Areview. Aust. J. Exp. Agric, 44: 705-715.
54. Rosen, E.D., P. Sarraf, A.E. Troy, G. Bradwin and K. Moore et al., 1999. PPAR gamma is requiredfor the differentiation of adipose tissue in vivo and in vitro. Mol. Cell, 4: 611-617.
55. Schenkel, F.S., S.P. Miller, X. Ye, S.S. Moore and J.D. Nkrumah et al, 2005. Association of singlenucleotide polymorphism in the leptin gene with carcass and meat quality traits of beef cattle.J. Anim. Sci, 83: 2009-2020.
56. Schenkel, F.S, S.P. Miller, S.S. Moore, C. Li and A. Fu et al, 2006a. Association of SNPs in theleptin and leptin receptor genes with different fat depos in beef cattle. Proceedings of the 8thWorld Congress on Genetics Applied to Livestock Production, Aug. 13-18, Belo Horizonte, MG,Brasil, pp: 1-4.
57. Schenkel, F.S, S.P. Miller, Z. Jiang, LB. Mandel, H. Li and J.W. Wiltm, 2006b. Association of asingle nucleotide polymorphism in the calpastatin gene with carcass and meat quality traits ofbeef cattle. J. Anim. Sci, 84: 291-299.
58. Schennmk, A, W.M.Stoop, M. H. P. W.Visker, J.M.L. Heck and H. Bovenhms et al, 2007.DGAT1 underlies large genetic variation in milk-fat composition of dairy cows. Anim. Genet,38: 467-473.
59. Shahidi, F, 2002. Lipid-Derived Flavors in Meat Products. In: Processing: Improving MeatQuality, Kerry, J, J. Kerry and D. Ledward (Eds.). Woodhead Publishing Limited, Cambridge,pp: 105-121.
60. Spiegelman, B.M, 1997. Peroxisonie proliferator-activated receptor gamma: A key regulator ofadipogenesis and systemic insulin sensitivity. Eur. J. Med. Res, 28: 457-464.
61. Stenzel-Poore, M.P, V.A. Cameron, J. Vaughan, P.E. Sachiko and W. Vale, 1992. DevelopmentCushing's Syndrome in corticotropin-releasing factor transgenic mice. Endocrinology,130: 3378-3386.
62. Stone, R.T, S.M. Kappes and C.W. Beattie, 1996. The bovine homologue of the obese gene mapsto chromosome 4. Mamm. Genome, 7: 399-400.
63. Tan, N.S, N.S. Shaw, N. Vinckenbosch, P. Liu and R. Yasmin et al., 2002. Selective cooperationbetween fatty acid binding proteins and peroxisonie proliferator-activated receptors inregulating transcription. Mol. Cell Biol, 22: 5114-5127.
64. Taniguchi, M, T. Utsugi, K. Oyama, H. Mannen and M. Kobayashi et al., 2004. Genotype ofstearoyl-CoA desaturase is associated with fatty acid composition in Japanese Black cattle.Mamm. Genome, 14: 142-148.
65. Taniguchi, M., L.L. Guan, B. Zhang, M.V. Dodson E. Okine and S.S. Moore, 2007. Gene expressionpatterns of bovine perimuscular preadipocytes during adipogenesis. Biochemical BiophysicalRes. Commun., 366: 346-351.
66. Thaller, G., C. Kuhn, A. Winter, G. Ewald and O. Bellmann et al., 2003. DGAT1, a new positionaland functional candidate gene for intramuscular fat deposition in cattle. Anim. Genet.,34: 354-357.
67. Thompson, J.M., 2004. The effects of marbling on flavour and juiciness scores of cooked beef, afteradjusting to a constant tenderness. Aust. J. Exp. Agric, 44: 645-652.
68. Tontonoz, P., E. Hu and B.M. Spiegelman, 1994. Stimulation of adipogenesis in fibroblasts byPPAR gamma 2, a lip id-activated transcription factor. Cell, 79: 1147-1156.
69. Wang, Y.H., N.I. Bower, A. Reverter, S.H. Tan and N. De Jager et al., 2008. Gene expressionpatterns during intramuscular fat development in cattle. J. Anim Sci., 10.2527/jas.2008-1082
70. Wood, I.A., G. Moser, D.L. Burrell, K.L. Mengersen and D.J. Hetzel, 2006. A meta-analyticassessment of a thyroglobulin marker for marbling in beef cattle. Genet. Sel. Evol., 38: 479-494.
71. Woods, S.C., R.J. Seeley, D. Jr. Porte and M.W. Schwartz, 1998. Signals that regulate food intakeand energy homeostasis. Science, 280: 1378-1383.
72. Zhang, Y., R. Proenca, M. Maffei, M. Barone, L. Leopold and J.M. Friedman, 1994. Positionalcloning of the mouse obesity gene and its human homologue. Nature, 372: 425-432.45