-
1
-
-
33645525893
-
MicroRNAs and Their Regulatory Roles in Plants
-
Jones-Rhoades, M. W., Bartel, D. P., and Bartel, B., MicroRNAs and Their Regulatory Roles in Plants, Annu. Rev. Plant Biol., 2006, vol. 57, pp. 19-53.
-
(2006)
Annu. Rev. Plant Biol.
, vol.57
, pp. 19-53
-
-
Jones-Rhoades, M.W.1
Bartel, D.P.2
Bartel, B.3
-
2
-
-
0942279635
-
RNAi-Mediated Targeting of Heterochromatin by the RITS Complex
-
Verdel, A., Jia, S., Gerber, S., Sugiyama, T., Gygi, S., Greval, S. I. S., and Moazed, D., RNAi-Mediated Targeting of Heterochromatin by the RITS Complex, Science, 2004, vol. 303, pp. 672-676.
-
(2004)
Science
, vol.303
, pp. 672-676
-
-
Verdel, A.1
Jia, S.2
Gerber, S.3
Sugiyama, T.4
Gygi, S.5
Greval, S.I.S.6
Moazed, D.7
-
3
-
-
0037718347
-
Arabidopsis HEN1: A Genetic Link between Endogenous miRNA Controlling Development and siRNA Controlling Transgene Silencing and Virus Resistance
-
Boutet, S., Vazquez, F. J., Beclin, C., Fagard, M., Gratias, A., Morel, J., Crete, P., Chen, X., and Vaucheret, H., Arabidopsis HEN1: A Genetic Link between Endogenous miRNA Controlling Development and siRNA Controlling Transgene Silencing and Virus Resistance, Curr. Biol., 2003, vol. 13, pp. 843-848.
-
(2003)
Curr. Biol.
, vol.13
, pp. 843-848
-
-
Boutet, S.1
Vazquez, F.J.2
Beclin, C.3
Fagard, M.4
Gratias, A.5
Morel, J.6
Crete, P.7
Chen, X.8
Vaucheret, H.9
-
4
-
-
2942672580
-
Computational Identification of Plant MicroRNAs and Their Targets, Including a Stress-Induced miRNA
-
Jones-Rhoades, M. W. and Bartel, D. P., Computational Identification of Plant MicroRNAs and Their Targets, Including a Stress-Induced miRNA, Mol. Cell, 2004, vol. 14, pp. 787-799.
-
(2004)
Mol. Cell
, vol.14
, pp. 787-799
-
-
Jones-Rhoades, M.W.1
Bartel, D.P.2
-
5
-
-
0037162702
-
Prediction of Plant microRNA Targets
-
Rhoades, M. W., Reinhart, B. J., Lim, L. P., Burge, C. B., Bartel, B., and Bartel, D. P., Prediction of Plant microRNA Targets, Cell, 2002, vol. 110, pp. 513-520.
-
(2002)
Cell
, vol.110
, pp. 513-520
-
-
Rhoades, M.W.1
Reinhart, B.J.2
Lim, L.P.3
Burge, C.B.4
Bartel, B.5
Bartel, D.P.6
-
6
-
-
12744262431
-
Prediction and Identification of Arabidopsis thaliana microRNAs and Their mRNA Targets
-
Wang, X. J., Reyes, J. L., Chua, N. H., and Gaasterland, T., Prediction and Identification of Arabidopsis thaliana microRNAs and Their mRNA Targets, Genome Biol., 2004, vol. 5, p. R65.
-
(2004)
Genome Biol.
, vol.5
-
-
Wang, X.J.1
Reyes, J.L.2
Chua, N.H.3
Gaasterland, T.4
-
7
-
-
4444383585
-
MicroRNA Regulation of Gene Expression in Plants
-
Dugas, D. V. and Bartel, B., MicroRNA Regulation of Gene Expression in Plants, Curr. Biol., 2004, vol. 7, pp. 512-520.
-
(2004)
Curr. Biol.
, vol.7
, pp. 512-520
-
-
Dugas, D.V.1
Bartel, B.2
-
8
-
-
0037738567
-
HASTY, the Arabidopsis Ortholog of Exportin 5/MSN5, Regulates Phase Change and Morphogenesis
-
Bollman, K. M., Aukerman, M. J., Park, M. Y., Hunter, C., Berardini, T. Z., and Poethig, R. S., HASTY, the Arabidopsis Ortholog of Exportin 5/MSN5, Regulates Phase Change and Morphogenesis, Development, 2003, vol. 130, pp. 1493-1504.
-
(2003)
Development
, vol.130
, pp. 1493-1504
-
-
Bollman, K.M.1
Aukerman, M.J.2
Park, M.Y.3
Hunter, C.4
Berardini, T.Z.5
Poethig, R.S.6
-
9
-
-
23944493378
-
Methylation Protects miRNAs and siRNAs from a 3′-end Uridylation Activity in Arabidopsis
-
Li, J., Yang, Z., Yu, B., Liu, J., and Chen, X., Methylation Protects miRNAs and siRNAs from a 3′-end Uridylation Activity in Arabidopsis, Curr. Biol., 2005, vol. 15, pp. 1501-1507.
-
(2005)
Curr. Biol.
, vol.15
, pp. 1501-1507
-
-
Li, J.1
Yang, Z.2
Yu, B.3
Liu, J.4
Chen, X.5
-
10
-
-
0037015239
-
CARPEL FACTORY, a Dicer Homolog, and HEN1, a Novel Protein, Act in MicroRNA Metabolism in Arabidopsis thaliana
-
Park, W., Li, J., Song, R., Messing, J., and Chen, X., CARPEL FACTORY, a Dicer Homolog, and HEN1, a Novel Protein, Act in MicroRNA Metabolism in Arabidopsis thaliana, Curr. Biol., 2002, vol. 12, pp. 1484-1495.
-
(2002)
Curr. Biol.
, vol.12
, pp. 1484-1495
-
-
Park, W.1
Li, J.2
Song, R.3
Messing, J.4
Chen, X.5
-
11
-
-
0038076109
-
Negative Feedback Regulation of Dicer-Like1 in Arabidopsis by microRNA-Guided mRNA Degradation
-
Xie, Z., Kasschau, K. D., and Carrington, J. C., Negative Feedback Regulation of Dicer-Like1 in Arabidopsis by microRNA-Guided mRNA Degradation, Curr. Biol., 2003, vol. 13, pp. 784-789.
-
(2003)
Curr. Biol.
, vol.13
, pp. 784-789
-
-
Xie, Z.1
Kasschau, K.D.2
Carrington, J.C.3
-
12
-
-
0034673638
-
An RNA-Directed Nuclease Mediates Post-Transcriptional Gene Silencing in Drosophila Cells
-
Hammond, S. M., Bernstein, E., Beach, D., and Hannon, G. J., An RNA-Directed Nuclease Mediates Post-Transcriptional Gene Silencing in Drosophila Cells, Nature, 2000, vol. 404, pp. 293-296.
-
(2000)
Nature
, vol.404
, pp. 293-296
-
-
Hammond, S.M.1
Bernstein, E.2
Beach, D.3
Hannon, G.J.4
-
13
-
-
0037144457
-
Cleavage of Scarecrow-like mRNA Targets Directed by a Class of Arabidopsis miRNA
-
Llave, C., Xie, Z., Kasschau, K. D., Carrington, J. C., Cleavage of Scarecrow-like mRNA Targets Directed by a Class of Arabidopsis miRNA, Science, 2002, vol. 297, pp. 2053-2056.
-
(2002)
Science
, vol.297
, pp. 2053-2056
-
-
Llave, C.1
Xie, Z.2
Kasschau, K.D.3
Carrington, J.C.4
-
14
-
-
0037224921
-
A Biochemical Framework for RNA Silencing in Plants
-
Tang, G., Reinhart, B. J., Bartel, D. P., and Zamore, P. D., A Biochemical Framework for RNA Silencing in Plants, Genes Dev., 2003, vol. 17, pp. 49-63.
-
(2003)
Genes Dev.
, vol.17
, pp. 49-63
-
-
Tang, G.1
Reinhart, B.J.2
Bartel, D.P.3
Zamore, P.D.4
-
15
-
-
15244358503
-
Systematic Discovery of Regulatory Motifs in Human Promoters and 3′ UTRs by Comparison of Several Mammals
-
Xie, X., Lu, J., Kulbokas, E. J., Golub, T. R., Mootha, V., Lindblad-Toh, K., Lander, E. S., Kellis, M., Systematic Discovery of Regulatory Motifs in Human Promoters and 3′ UTRs by Comparison of Several Mammals, Nature, 2005, vol. 434, pp. 338-345.
-
(2005)
Nature
, vol.434
, pp. 338-345
-
-
Xie, X.1
Lu, J.2
Kulbokas, E.J.3
Golub, T.R.4
Mootha, V.5
Lindblad-Toh, K.6
Lander, E.S.7
Kellis, M.8
-
16
-
-
18044377963
-
Principles of MicroRNA-Target Recognition
-
Brennecke, J., Stark, A., Russell, R. B., and Cohen, S. M., Principles of MicroRNA-Target Recognition, PLoS. Biol., 2005, vol. 3, p. e85.
-
(2005)
PLoS. Biol.
, vol.3
-
-
Brennecke, J.1
Stark, A.2
Russell, R.B.3
Cohen, S.M.4
-
17
-
-
20944450160
-
Combinatorial MicroRNA Target Predictions
-
Krek, A., Grun, D., Poy, M. N., Wolf, R., Rosenberg, L., Epstein, E. J., MacMenamin, P., da Piedade, I., Gunsalus, K. C., Stoffel, M., and Rajewsky, N., Combinatorial MicroRNA Target Predictions, Nat. Genet., 2005, vol. 37, pp. 495-500.
-
(2005)
Nat. Genet.
, vol.37
, pp. 495-500
-
-
Krek, A.1
Grun, D.2
Poy, M.N.3
Wolf, R.4
Rosenberg, L.5
Epstein, E.J.6
MacMenamin, P.7
da Piedade, I.8
Gunsalus, K.C.9
Stoffel, M.10
Rajewsky, N.11
-
18
-
-
0346094457
-
Prediction of Mammalian MicroRNA Targets
-
Lewis, B. P., Shih, I. H., Jones-Rhoades, M. W., Bartel, D. P., and Burge, C. B., Prediction of Mammalian MicroRNA Targets, Cell, 2003, vol. 115, pp. 787-798.
-
(2003)
Cell
, vol.115
, pp. 787-798
-
-
Lewis, B.P.1
Shih, I.H.2
Jones-Rhoades, M.W.3
Bartel, D.P.4
Burge, C.B.5
-
19
-
-
3843089328
-
Detection of 91 Potential in Plant Conserved Plant MicroRNAs in Arabidopsis thaliana and Oryza sativa Identifies Important Target Genes
-
Bonnet, E., Wuyts, J., Rouze, P., and van de Peer, Y., Detection of 91 Potential in Plant Conserved Plant MicroRNAs in Arabidopsis thaliana and Oryza sativa Identifies Important Target Genes, Proc. Natl. Acad. Sci. USA, 2004, vol. 101, pp. 115-116.
-
(2004)
Proc. Natl. Acad. Sci. USA
, vol.101
, pp. 115-116
-
-
Bonnet, E.1
Wuyts, J.2
Rouze, P.3
van de Peer, Y.4
-
20
-
-
22144464033
-
Cloning and Characterization of MicroRNAs from Rice
-
Ramanjulu, S., Thomas, G., Pradeep, K. J., and Zhu, J. K., Cloning and Characterization of MicroRNAs from Rice, Plant Cell, 2005, vol. 17, pp. 1397-1411.
-
(2005)
Plant Cell
, vol.17
, pp. 1397-1411
-
-
Ramanjulu, S.1
Thomas, G.2
Pradeep, K.J.3
Zhu, J.K.4
-
21
-
-
33745239258
-
Approaches to MicroRNA Discovery
-
Berezikov, E., Cuppen, E., and Plasterk, R. H., Approaches to MicroRNA Discovery, Nat. Genet., 2006, vol. 38, pp. S2-S7.
-
(2006)
Nat. Genet.
, vol.38
-
-
Berezikov, E.1
Cuppen, E.2
Plasterk, R.H.3
-
22
-
-
24644490196
-
Elucidation of the Small RNA Component of the Transcriptome
-
Lu, C., Tej, S. S., Luo, S., Haudenschild, C. D., Meyers, B. C., and Green, P. J., Elucidation of the Small RNA Component of the Transcriptome, Science, 2005, vol. 309, pp. 1567-1569.
-
(2005)
Science
, vol.309
, pp. 1567-1569
-
-
Lu, C.1
Tej, S.S.2
Luo, S.3
Haudenschild, C.D.4
Meyers, B.C.5
Green, P.J.6
-
23
-
-
34447121300
-
Identification of Novel Small RNAs in Tomato
-
Rachel, L., Rusholme, P., Simon, M., Nima, P., Vincent, M., Kenneth, M., Graham, S, and Tamas, D., Identification of Novel Small RNAs in Tomato, Planta, 2007, vol. 226, pp. 709-717.
-
(2007)
Planta
, vol.226
, pp. 709-717
-
-
Rachel, L.1
Rusholme, P.2
Simon, M.3
Nima, P.4
Vincent, M.5
Kenneth, M.6
Graham, S.7
Tamas, D.8
-
24
-
-
27844495281
-
Identification and Characterization of New Plant microRNAs Using EST Analysis
-
Zhang, B. H., Pan, X. P., Wang, Q. L., Cobb, G. P., and Anderson, T. A., Identification and Characterization of New Plant microRNAs Using EST Analysis, Cell Res., 2005, vol. 15, pp. 336-360.
-
(2005)
Cell Res.
, vol.15
, pp. 336-360
-
-
Zhang, B.H.1
Pan, X.P.2
Wang, Q.L.3
Cobb, G.P.4
Anderson, T.A.5
-
25
-
-
0025879424
-
Complementary DNA Sequencing: Expressed Sequence Tags and Human Genome Project
-
Adams, M. D., Kelley, J. M., Gocayne, J. D., Dubnick, M., Polymeropoulos, M. H., Xiao, H., Merril, C. R., Wu, A., Olde, B., Moreno, R. F., Kerlavage, A. R., McCombie, W. R., and Venter, J. C., Complementary DNA Sequencing: Expressed Sequence Tags and Human Genome Project, Science, 1991, vol. 252, pp. 1651-1656.
-
(1991)
Science
, vol.252
, pp. 1651-1656
-
-
Adams, M.D.1
Kelley, J.M.2
Gocayne, J.D.3
Dubnick, M.4
Polymeropoulos, M.H.5
Xiao, H.6
Merril, C.R.7
Wu, A.8
Olde, B.9
Moreno, R.F.10
Kerlavage, A.R.11
McCombie, W.R.12
Venter, J.C.13
-
26
-
-
1042269464
-
EST-PAGE-Managing and Analyzing EST Data
-
Matukumalli, L. K., Grefenstette, J. J., Sonstegard, T. S., and van Tassell, C. P., EST-PAGE-Managing and Analyzing EST Data, Bioinformatics, 2004, vol. 20, pp. 286-288.
-
(2004)
Bioinformatics
, vol.20
, pp. 286-288
-
-
Matukumalli, L.K.1
Grefenstette, J.J.2
Sonstegard, T.S.3
van Tassell, C.P.4
-
27
-
-
0037370020
-
A Uniform System for MicroRNA Annotation
-
Ambros, V., Bartel, B., Bartel, D. P., Burge, C. B., Carrington, J. C., Chen, X., Dreyfuss, G., Eddy, S. R., Griffiths-Jones, S., Marshall, M., Matzke, M., Ruvkun, G., and Tuschl, T., A Uniform System for MicroRNA Annotation, RNA, 2003, vol. 9, pp. 277-279.
-
(2003)
Rna
, vol.9
, pp. 277-279
-
-
Ambros, V.1
Bartel, B.2
Bartel, D.P.3
Burge, C.B.4
Carrington, J.C.5
Chen, X.6
Dreyfuss, G.7
Eddy, S.R.8
Griffiths-Jones, S.9
Marshall, M.10
Matzke, M.11
Ruvkun, G.12
Tuschl, T.13
-
28
-
-
30744468557
-
Evidence That miRNAs Are Different from Other RNAs
-
Zhang, B. H., Pan, X. P., Cox, B., Coob, G. P., and Anderson, T. A., Evidence That miRNAs Are Different from Other RNAs, Cell Mol. Life Sci., 2006, vol. 63, pp. 246-254.
-
(2006)
Cell Mol. Life Sci.
, vol.63
, pp. 246-254
-
-
Zhang, B.H.1
Pan, X.P.2
Cox, B.3
Coob, G.P.4
Anderson, T.A.5
-
29
-
-
12744262431
-
Prediction and Identification of Arabidopsis thaliana MicroRNAs and Their mRNA Targets
-
Wang, X. J., Reyes, J. L., Chua, N. H., and Gaasterland, T., Prediction and Identification of Arabidopsis thaliana MicroRNAs and Their mRNA Targets, Genome Biol., 2004, vol. 5, p. R65.
-
(2004)
Genome Biol.
, vol.5
-
-
Wang, X.J.1
Reyes, J.L.2
Chua, N.H.3
Gaasterland, T.4
-
30
-
-
33646830110
-
Conservation and Divergence of Plant microRNA Genes
-
Zhang, B. H., Pan, X., Cannon, C. H., Cobb, G. P., and Anderson, T. A., Conservation and Divergence of Plant microRNA Genes, Plant J., 2006, vol. 46, pp. 243-259.
-
(2006)
Plant J.
, vol.46
, pp. 243-259
-
-
Zhang, B.H.1
Pan, X.2
Cannon, C.H.3
Cobb, G.P.4
Anderson, T.A.5
-
31
-
-
33947411951
-
Computational Identification of Novel MicroRNAs and Targets in Brassica napus
-
Xie, F. L., Huang, S. Q., Guo, K., Xiang, A. L., Zhu, Y. Y., Nie, L., and Yang, Z. M., Computational Identification of Novel MicroRNAs and Targets in Brassica napus, FEBS Lett., 2007, vol. 581, pp. 1464-1474.
-
(2007)
FEBS Lett.
, vol.581
, pp. 1464-1474
-
-
Xie, F.L.1
Huang, S.Q.2
Guo, K.3
Xiang, A.L.4
Zhu, Y.Y.5
Nie, L.6
Yang, Z.M.7
-
32
-
-
39449099991
-
Small RNAs in Tomato Fruit and Leaf Development
-
Itaya, A., Bundschuh, R., Archual, A. J., Joung, J. G., Fei, Z., Dai, X., Zhao, P. X., Tang, Y., Nelson, R. S., and Ding, B., Small RNAs in Tomato Fruit and Leaf Development, Biochim. Biophys. Acta, 2008, vol. 1779, pp. 99-107.
-
(2008)
Biochim. Biophys. Acta
, vol.1779
, pp. 99-107
-
-
Itaya, A.1
Bundschuh, R.2
Archual, A.J.3
Joung, J.G.4
Fei, Z.5
Dai, X.6
Zhao, P.X.7
Tang, Y.8
Nelson, R.S.9
Ding, B.10
-
33
-
-
0030048899
-
A New Family of DNA Binding Proteins Includes Putative Transcriptional Regulators of the Antirrhinum majus Floral Meristem Identity Gene SQUAMOSA
-
Klein, J., Saedler, H., and Huijser, P., A New Family of DNA Binding Proteins Includes Putative Transcriptional Regulators of the Antirrhinum majus Floral Meristem Identity Gene SQUAMOSA, Mol. Gen. Genet., 1996, vol. 250, pp. 7-16.
-
(1996)
Mol. Gen. Genet.
, vol.250
, pp. 7-16
-
-
Klein, J.1
Saedler, H.2
Huijser, P.3
-
34
-
-
0142072737
-
Radial Patterning of Arabidopsis Shoots by Class III HD-ZIP and KANADI Genes
-
Emery, J. F., Floyd, S. K., Alvarez, J., Eshed, Y., Hawker, N. P., and Izhaki, A., Radial Patterning of Arabidopsis Shoots by Class III HD-ZIP and KANADI Genes, Curr. Biol., 2003, vol. 13, pp. 1768-1774.
-
(2003)
Curr. Biol.
, vol.13
, pp. 1768-1774
-
-
Emery, J.F.1
Floyd, S.K.2
Alvarez, J.3
Eshed, Y.4
Hawker, N.P.5
Izhaki, A.6
-
35
-
-
0033385766
-
Pseudomonas syringae pv. tomato Induces the Expression of Tomato EREBP-Like Genes Pti4 and Pti5 Independent of Ethylene, Salicylate and Jasmonate
-
Thara, V. K., Tang, X., Gu, Y. Q., Martin, G. B., and Zhou, J. M., Pseudomonas syringae pv. tomato Induces the Expression of Tomato EREBP-Like Genes Pti4 and Pti5 Independent of Ethylene, Salicylate and Jasmonate, Plant J., 1999, vol. 20, pp. 475-483.
-
(1999)
Plant J.
, vol.20
, pp. 475-483
-
-
Thara, V.K.1
Tang, X.2
Gu, Y.Q.3
Martin, G.B.4
Zhou, J.M.5
-
36
-
-
0032417391
-
Nuclear Events in Ethylene Signaling: A Transcriptional Cascade Mediated by ETHYLENE-INSENSITIVE 3 and ETHYLENE-RESPONSE FACTOR 1
-
Solano, R., Stepanova, A., Chao, Q. M., and Ecker, J. R., Nuclear Events in Ethylene Signaling: A Transcriptional Cascade Mediated by ETHYLENE-INSENSITIVE 3 and ETHYLENE-RESPONSE FACTOR 1, Genes Dev., 1998, vol. 12, pp. 3703-3714.
-
(1998)
Genes Dev.
, vol.12
, pp. 3703-3714
-
-
Solano, R.1
Stepanova, A.2
Chao, Q.M.3
Ecker, J.R.4
-
37
-
-
2442650370
-
The Action of ARGONAUTE1 in the miRNA Pathway and Its Regulation by the miRNA Pathway Are Crucial for Plant Development
-
Vaucheret, H., Vazquez, F., Crete, P., and Bartel, D. P., The Action of ARGONAUTE1 in the miRNA Pathway and Its Regulation by the miRNA Pathway Are Crucial for Plant Development, Genes Dev., 2004, vol. 18, pp. 1187-1197.
-
(2004)
Genes Dev.
, vol.18
, pp. 1187-1197
-
-
Vaucheret, H.1
Vazquez, F.2
Crete, P.3
Bartel, D.P.4
-
38
-
-
33646072563
-
Exogenous Ethylene Influences Flower Opening of Cut Roses (Rosa hybrida) by Regulating the Genes Encoding Ethylene Biosynthesis Enzymes
-
Ma, N., Cai, L., Lu, W. J., Tan, H., and Gao, J. P., Exogenous Ethylene Influences Flower Opening of Cut Roses (Rosa hybrida) by Regulating the Genes Encoding Ethylene Biosynthesis Enzymes, Science in China Press, 2008, vol. 48, pp. 434-444.
-
(2008)
Science in China Press
, vol.48
, pp. 434-444
-
-
Ma, N.1
Cai, L.2
Lu, W.J.3
Tan, H.4
Gao, J.P.5
|