-
1
-
-
0030774854
-
Rhizobium gallicum sp. nov. and Rhizobium giardinii sp. nov., from Phaseolus vulgaris
-
Amarger, N., V. Marcheret, and G. Laguerre. 1997. Rhizobium gallicum sp. nov. and Rhizobium giardinii sp. nov., from Phaseolus vulgaris. Int. J. Syst. Bacteriol. 47:996-1006.
-
(1997)
Int. J. Syst. Bacteriol.
, vol.47
, pp. 996-1006
-
-
Amarger, N.1
Marcheret, V.2
Laguerre, G.3
-
2
-
-
12744280569
-
Prevalence of Burkholderia sp. nodule symbionts on four mimosoid legumes from Barro Colorado Island, Panama
-
Barrett, C. F., and M. A. Parker. 2005. Prevalence of Burkholderia sp. nodule symbionts on four mimosoid legumes from Barro Colorado Island, Panama. Syst. Appl. Microbiol. 28:57-65.
-
(2005)
Syst. Appl. Microbiol.
, vol.28
, pp. 57-65
-
-
Barrett, C.F.1
Parker, M.A.2
-
3
-
-
33144458430
-
Coexistence of Burkholderia, Cupriavidus, and Rhizobium sp. nodule bacteria on two Mimosa spp
-
Barrett, C. F., and M. A. Parker. 2006. Coexistence of Burkholderia, Cupriavidus, and Rhizobium sp. nodule bacteria on two Mimosa spp. in Costa Rica. Appl. Environ. Microbiol. 72:1198-1206.
-
(2006)
Costa Rica. Appl. Environ. Microbiol.
, vol.72
, pp. 1198-1206
-
-
Barrett, C.F.1
Parker, M.A.2
-
4
-
-
0344666694
-
Legume symbiotic nitrogen fixation by β-proteobacteria is widespread in nature
-
Chen, W. M., L. Moulin, and C. Bontemps. 2003. Legume symbiotic nitrogen fixation by β-proteobacteria is widespread in nature. J. Bacteriol. 185:72667272.
-
(2003)
J. Bacteriol.
, vol.185
, pp. 72667272
-
-
Chen, W.M.1
Moulin, L.2
Bontemps, C.3
-
5
-
-
32044445996
-
Proof that Burkholderia strains form effective symbioses with legumes: A study of novel Mimosanodulating strains from South America
-
Chen, W. M., S. M. de Faria, R. Straliotto, R. M. Pitard, J. L. SimoesAraujo, J.-H. Chou, Y.-J. Chou, E. Barrios, A. R. Prescott, G. N. Elliott, J. I. Sprent, J. P. W. Young, and E. K. James. 2005. Proof that Burkholderia strains form effective symbioses with legumes: a study of novel Mimosanodulating strains from South America. Appl. Environ. Microbiol. 71:7461-7471.
-
(2005)
Appl. Environ. Microbiol.
, vol.71
, pp. 7461-7471
-
-
Chen, W.M.1
De Faria, S.M.2
Straliotto, R.3
Pitard, R.M.4
SimoesAraujo, J.L.5
Chou, J.-H.6
Chou, Y.-J.7
Barrios, E.8
Prescott, A.R.9
Elliott, G.N.10
Sprent, J.I.11
Young, J.P.W.12
James, E.K.13
-
6
-
-
33747878490
-
Burkholderia mimosarum sp. nov. isolated from root nodules of Mimosa spp. from Taiwan and South America
-
Chen, W. M., E. K. James, T. Coenye, J. H. Chou, E. Barrios, S. M. de Faria, G. N. Elliott, S. Y. Sheu, J. I. Sprent, and P. Vandamme. 2006. Burkholderia mimosarum sp. nov. isolated from root nodules of Mimosa spp. from Taiwan and South America. Int. J. Syst. Evol. Microbiol. 56:1847-1851.
-
(2006)
Int. J. Syst. Evol. Microbiol.
, vol.56
, pp. 1847-1851
-
-
Chen, W.M.1
James, E.K.2
Coenye, T.3
Chou, J.H.4
Barrios, E.5
De Faria, S.M.6
Elliott, G.N.7
Sheu, S.Y.8
Sprent, J.I.9
Vandamme, P.10
-
7
-
-
34249075972
-
Burkholderia nodosa sp. nov., isolated from root nodules of the woody Brazilian legumes Mimosa bimucronata and Mimosa scabrella
-
Chen, W. M., S. M. de Faria, E. K. James, G. N. Elliott, K. Y. Lin, J. H. Chou, S. Y. Sheu, M. Cnockaert, J. I. Sprent, and P. Vandamme. 2007. Burkholderia nodosa sp. nov., isolated from root nodules of the woody Brazilian legumes Mimosa bimucronata and Mimosa scabrella. Int. J. Syst. Evol. Microbiol. 57:1055-1059.
-
(2007)
Int. J. Syst. Evol. Microbiol.
, vol.57
, pp. 1055-1059
-
-
Chen, W.M.1
De Faria, S.M.2
James, E.K.3
Elliott, G.N.4
Lin, K.Y.5
Chou, J.H.6
Sheu, S.Y.7
Cnockaert, M.8
Sprent, J.I.9
Vandamme, P.10
-
8
-
-
0026723774
-
Use of repetitive sequences and the polymerase chain reaction to fingerprint the genomes of Rhizobium meliloti isolates and other soil bacteria
-
de Bruijn, F. J. 1992. Use of repetitive sequences and the polymerase chain reaction to fingerprint the genomes of Rhizobium meliloti isolates and other soil bacteria. Appl. Environ. Microbiol. 58:2180-2187.
-
(1992)
Appl. Environ. Microbiol.
, vol.58
, pp. 2180-2187
-
-
De Bruijn, F.J.1
-
9
-
-
0010627666
-
Nitrate reductase activity of free living and symbiotic uptake hydrogenase-positive and uptake hydrogenase-negative strains of Bradyrhizobium aponicum
-
Delgado, M. J., J. Olivares, and E. J. Bedmar. 1989. Nitrate reductase activity of free living and symbiotic uptake hydrogenase-positive and uptake hydrogenase-negative strains of Bradyrhizobium aponicum. Arch. Microbiol. 151:166-170.
-
(1989)
Arch. Microbiol.
, vol.151
, pp. 166-170
-
-
Delgado, M.J.1
Olivares, J.2
Bedmar, E.J.3
-
10
-
-
0028896542
-
Species limits in Rhizobium populations that nodulate the common bean (Phaseolus vulgaris)
-
Eardly, B. D., F. S. Wang, T. S. Whittam, and R. K. Selander. 1995. Species limits in Rhizobium populations that nodulate the common bean (Phaseolus vulgaris). Appl. Environ. Microbiol. 61:507-512.
-
(1995)
Appl. Environ. Microbiol.
, vol.61
, pp. 507-512
-
-
Eardly, B.D.1
Wang, F.S.2
Whittam, T.S.3
Selander, R.K.4
-
11
-
-
33845530709
-
Burkholderia phymatum is a highly effective nitrogen-fixing symbiont of Mimosa spp. and fixes nitrogen explanta
-
Elliott, G. N., W.-M. Chen, J. H. Chou, H. C. Wang, S. Y. Sheu, L. Perin, V. M. Reis, L. Moulin, M. F. Simon, C. Bontemps, J. M. Sutherland, R. Bessi, S. M. de Faria, M. J. Trinick, A. R. Prescott, J. I. Sprent, and E. K. James. 2007. Burkholderia phymatum is a highly effective nitrogen-fixing symbiont of Mimosa spp. and fixes nitrogen explanta. New Phytol. 173:168-180.
-
(2007)
New Phytol.
, vol.173
, pp. 168-180
-
-
Elliott, G.N.1
Chen, W.-M.2
Chou, J.H.3
Wang, H.C.4
Sheu, S.Y.5
Perin, L.6
Reis, V.M.7
Moulin, L.8
Simon, M.F.9
Bontemps, C.10
Sutherland, J.M.11
Bessi, R.12
De Faria, S.M.13
Trinick, M.J.14
Prescott, A.R.15
Sprent, J.I.16
James, E.K.17
-
12
-
-
0035378204
-
Burkholderia, a genus rich in plant-associated nitrogen fixers with wide environmental and geographic distribution
-
Estrada-de los Santos, P., R. Bustillos-Cristales, and J. Caballero-Mellado. 2001. Burkholderia, a genus rich in plant-associated nitrogen fixers with wide environmental and geographic distribution. Appl. Environ. Microbiol. 67: 790-2798.
-
(2001)
Appl. Environ. Microbiol.
, vol.67
, pp. 790-2798
-
-
Santos, E.-D.L.1
Bustillos-Cristales, P.R.2
Caballero-Mellado, J.3
-
13
-
-
0032782081
-
At least five rhizobial species nodulate Phaseolus vulgaris in a Spanish soil
-
Herrera-Cervera, J. A., J. Caballero-Mellado, G. Laguerre, H. V. Tichy, N. Requena, N. Amarger, E. Martinez-Romero, J. Olivares, and J. Sanjuan. 1999. At least five rhizobial species nodulate Phaseolus vulgaris in a Spanish soil. FEMS Microbiol. Ecol. 30:87-97.
-
(1999)
FEMS Microbiol. Ecol.
, vol.30
, pp. 87-97
-
-
Herrera-Cervera, J.A.1
Caballero-Mellado, J.2
Laguerre, G.3
Tichy, H.V.4
Requena, N.5
Amarger, N.6
Martinez-Romero, E.7
Olivares, J.8
Sanjuan, J.9
-
14
-
-
63849240188
-
Application of the rep-FCR DNA fingerprinting technique to study microbial diversity ecology and evolution
-
Ishii, S., and M. J. Sadowsky. 2009. Application of the rep-FCR DNA fingerprinting technique to study microbial diversity ecology and evolution. Environ. Microbiol. 11:733-740.
-
(2009)
Environ. Microbiol.
, vol.11
, pp. 733-740
-
-
Ishii, S.1
Sadowsky, M.J.2
-
15
-
-
0000732090
-
Evolution of protein molecules
-
H. N. Munro (ed.),Academic Press, New York, NY
-
Jukes, T. H., and C. R Cantor. 1969. Evolution of protein molecules, p. 21-132. In H. N. Munro (ed.), Mammalian protein metabolism. Academic Press, New York, NY.
-
(1969)
Mammalian protein metabolism
, pp. 21-132
-
-
Jukes, T.H.1
Cantor, C.R.2
-
16
-
-
0037735147
-
-
Arizona State University, Tempe, AZ.
-
Kumar, S., K. Tamura, I. B. Jakobsen, and M. Nei. 2001. MEGA2: molecular evolutionary genetics analysis software. Arizona State University, Tempe, AZ.
-
(2001)
MEGA2: Molecular Evolutionary Genetics Analysis Software.
-
-
Kumar, S.1
Tamura, K.2
Jakobsen, I.B.3
Nei, M.4
-
17
-
-
47749100130
-
Multichromosomal genome structure and confirmation of diazotrophy in novel plant-associated Burkholderia species
-
Martfnez-Aguilar, L., R Diaz, J. J. Peña-Cabriales, P. Estrada-de los Santos, M. F. Dunn, and J. Caballero-Mellado. 2008. Multichromosomal genome structure and confirmation of diazotrophy in novel plant-associated Burkholderia species. Appl. Environ. Microbiol. 74:4574-4579.
-
(2008)
Appl. Environ. Microbiol.
, vol.74
, pp. 4574-4579
-
-
Martfnez-Aguilar, L.1
Diaz, R.2
Peña-Cabriales, J.J.3
Estrada-de Los Santos, P.4
Dunn, M.F.5
Caballero-Mellado, J.6
-
18
-
-
0025772407
-
Rhizobium tropiči, a novel nodulating Phaseolus vulgaris L. bean and Leucaena sp. trees
-
Martinez-Romero, E., L. Segovia, and F. M. Mercante. 1991. Rhizobium tropiči, a novel nodulating Phaseolus vulgaris L. bean and Leucaena sp. trees. Int. J. Syst. Bacteriol. 41:417-426.
-
(1991)
Int. J. Syst. Bacteriol.
, vol.41
, pp. 417-426
-
-
Martinez-Romero, E.1
Segovia, L.2
Mercante, F.M.3
-
19
-
-
1642532379
-
Expression of nir, nor and nos denitrification genes from Bradyrhizobium japonicum in soybean root nodules
-
Mesa, S., J. D. Alché, E. J. Bedmar, and M. J. Delgado. 2004. Expression of nir, nor and nos denitrification genes from Bradyrhizobium japonicum in soybean root nodules. Physiol. Plant. 120:205-211.
-
(2004)
Physiol. Plant.
, vol.120
, pp. 205-211
-
-
Mesa, S.1
Alché, J.D.2
Bedmar, E.J.3
Delgado, M.J.4
-
20
-
-
0036092747
-
Different species and symbiotic genotypes of field rhizobia can nodulate Phaseolus vulgaris in Tunisian soils
-
Mhamdi, R, G. Laguerre, M. E. Aouani, M. Mars, and N. Amarger. 2002. Different species and symbiotic genotypes of field rhizobia can nodulate Phaseolus vulgaris in Tunisian soils. FEMS Microbiol. Ecol. 41:77-84.
-
(2002)
FEMS Microbiol. Ecol.
, vol.41
, pp. 77-84
-
-
Mhamdi, R.1
Laguerre, G.2
Aouani, M.E.3
Mars, M.4
Amarger, N.5
-
21
-
-
0035927646
-
Nodulation of legumes by members of the ß subclass of proteobacteria
-
Moulin, L., A. Munive, B. Dreyfus, and C. Boivin-Masson. 2001. Nodulation of legumes by members of the ß subclass of proteobacteria. Nature 411:948950.
-
(2001)
Nature
, vol.411
, pp. 948950
-
-
Moulin, L.1
Munive, A.2
Dreyfus, B.3
Boivin-Masson, C.4
-
22
-
-
33747889774
-
Burkholderia silvatlantica sp. nov., a diazotrophic bacterium associated with sugar cane and maize
-
Perin, L., L. Martinez-Aguilar, G. Paredes-Valdez, J. I. Baldani, P. Estrada-de los Santos, V. M. Reis, and J. Caballero-Mellado. 2006. Burkholderia silvatlantica sp. nov., a diazotrophic bacterium associated with sugar cane and maize. Int. J. Syst. Evol. Microbiol. 56:1931-1937.
-
(2006)
Int. J. Syst. Evol. Microbiol.
, vol.56
, pp. 1931-1937
-
-
Perin, L.1
Martinez-Aguilar, L.2
Paredes-Valdez, G.3
Baldani, J.I.4
Estrada-de Los Santos, P.5
Reis, V.M.6
Caballero-Mellado, J.7
-
23
-
-
0035116353
-
Improvement in the RFLF procedure for studying the diversity of nifH genes in communities of nitrogen fixers in soil
-
Poly, F., L. J. Monrozier, and R. Bally. 2001. Improvement in the RFLF procedure for studying the diversity of nifH genes in communities of nitrogen fixers in soil. Res. Microbiol. 152:95-103.
-
(2001)
Res. Microbiol.
, vol.152
, pp. 95-103
-
-
Poly, F.1
Monrozier, L.J.2
Bally, R.3
-
24
-
-
33646178605
-
Nitrogen-fixing nodules from rose wood legume trees (Dalbergia spp.) endemic to Madagascar host seven different genera belonging to alpha- And beta-Proteobacteria
-
Rasolomampianina, R., X. Bailly, R. Fetiarison, R. Rabevohitra, G. Béna, L. Ramaroson, M. Raherimandimby, L. Moulin, P. De Lajudie, B. Dreyfus, and J. C. Avarre. 2005. Nitrogen-fixing nodules from rose wood legume trees (Dalbergia spp.) endemic to Madagascar host seven different genera belonging to alpha- and beta-Proteobacteria. Mol. Ecol. 14:4135-4146.
-
(2005)
Mol. Ecol.
, vol.14
, pp. 4135-4146
-
-
Rasolomampianina, R.1
Bailly, X.2
Fetiarison, R.3
Rabevohitra, R.4
Béna, G.5
Ramaroson, L.6
Raherimandimby, M.7
Moulin, L.8
De Lajudie, P.9
Dreyfus, B.10
Avarre, J.C.11
-
25
-
-
0020807906
-
RNA polymerase from Rhizobium japonicum
-
Regensburger, B., and H. Hennecke. 1983. RNA polymerase from Rhizobium japonicum. Arch. Microbiol. 135:103-109.
-
(1983)
Arch. Microbiol.
, vol.135
, pp. 103-109
-
-
Regensburger, B.1
Hennecke, H.2
-
26
-
-
20844448377
-
Burkholderia tropica sp. nov., a novel nitrogen-fixing, plant associated bacterium
-
Reis, V. M., P. Estrada-de los Santos, S. Tenorio-Salgado, J. Vogel, M. Stofels, S. Guyon, P. Mavingui, V. L. D. Baldani, M. Schmid, J. I. Baldani, J. Balandreau, A. Hartmann, and J. Caballero-Mellado. 2004. Burkholderia tropica sp. nov., a novel nitrogen-fixing, plant associated bacterium. Int. J. Syst. Evol. Microbiol. 54:2155-2162.
-
(2004)
Int. J. Syst. Evol. Microbiol.
, vol.54
, pp. 2155-2162
-
-
Reis, V.M.1
Estrada-de Los Santos, P.2
Tenorio-Salgado, S.3
Vogel, J.4
Stofels, M.5
Guyon, S.6
Mavingui, P.7
Baldani, V.L.D.8
Schmid, M.9
Baldani, J.I.10
Balandreau, J.11
Hartmann, A.12
Caballero-Mellado, J.13
-
27
-
-
0023375195
-
The neighbor-joining method: A new method for reconstructing phylogenetic trees
-
Saitou, N., and M. Nei. 1987. The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol. Biol. Evol. 4:406-425.
-
(1987)
Mol. Biol. Evol.
, vol.4
, pp. 406-425
-
-
Saitou, N.1
Nei, M.2
-
28
-
-
0141590419
-
Changing concepts in the systematics of bacterial nitrogen-fixing legume symbionts
-
Sawada, H., L. D. Kuykendall, and J. M. Young. 2003. Changing concepts in the systematics of bacterial nitrogen-fixing legume symbionts. J. Gen. Appl. Microbiol. 49:155-179.
-
(2003)
J. Gen. Appl. Microbiol.
, vol.49
, pp. 155-179
-
-
Sawada, H.1
Kuykendall, L.D.2
Young, J.M.3
-
29
-
-
0027447968
-
Reclassification of American Rhizobium leguminosarum biovar phaseoli type i strains as Rhizobium etli sp. nov
-
Segovia, L., J. P. W. Young, and E. Martinez-Romero. 1993. Reclassification of American Rhizobium leguminosarum biovar phaseoli type I strains as Rhizobium etli sp. nov. Int. J. Syst. Bacteriol. 43:374-377.
-
(1993)
Int. J. Syst. Bacteriol.
, vol.43
, pp. 374-377
-
-
Segovia, L.1
Young, J.P.W.2
Martinez-Romero, E.3
-
30
-
-
0027968068
-
CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
-
Thompson, J. D., D. G. Higgins, and T. J. Gibson. 1994. CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res. 22:4673-4680.
-
(1994)
Nucleic Acids Res.
, vol.22
, pp. 4673-4680
-
-
Thompson, J.D.1
Higgins, D.G.2
Gibson, T.J.3
-
31
-
-
12244249871
-
Non-Frankia actinomycetes isolated from surface-sterilized roots of Casuarina equisetifolia fix nitrogen
-
Valdês, M., N. O. Pérez, P. Estrada-de los Santos, J. Caballero-Mellado, J. J. Peña-Cabriales, P. Normand, and A. M. Hirsh. 2005. Non-Frankia actinomycetes isolated from surface-sterilized roots of Casuarina equisetifolia fix nitrogen. Appl. Environ. Microbiol. 71:460-466.
-
(2005)
Appl. Environ. Microbiol.
, vol.71
, pp. 460-466
-
-
Valdês, M.1
Pérez, N.O.2
Estrada-de Los Santos, P.3
Caballero-Mellado, J.4
Peña-Cabriales, J.J.5
Normand, P.6
Hirsh, A.M.7
-
32
-
-
0029942146
-
Folyphasic taxonomy, a consensus approach to bacterial systematics
-
Vandamme, P., B. Pot, M. Gillis, P. de Vos, K. Kersters, and J. Swings. 1996. Folyphasic taxonomy, a consensus approach to bacterial systematics. Microbiol. Rev. 60:407-438.
-
(1996)
Microbiol. Rev.
, vol.60
, pp. 407-438
-
-
Vandamme, P.1
Pot, B.2
Gillis, M.3
De Vos, P.4
Kersters, K.5
Swings, J.6
-
33
-
-
0036959851
-
Burkholderia tuberum sp. nov. and Burkholderia phymatum sp. nov. nodulate the roots of tropical legumes
-
Vandamme, P., J. Goris, W. M. Chen, P. de Vos, and A. Willems. 2002. Burkholderia tuberum sp. nov. and Burkholderia phymatum sp. nov. nodulate the roots of tropical legumes. Syst. Appl. Microbiol. 25:507-512.
-
(2002)
Syst. Appl. Microbiol.
, vol.25
, pp. 507-512
-
-
Vandamme, P.1
Goris, J.2
Chen, W.M.3
De Vos, P.4
Willems, A.5
-
34
-
-
0001275542
-
Repetitive sequence-based PCR (rep-PCR) DNA fingerprinting of bacterial genomes
-
F. J. de Bruijn, J. R. Lupski, and G. M. Weinstock (ed.), Chapman and Hall, New York, NY.
-
Versalovic, J. V., F. J. de Bruijn, and J. R. Lupski. 1998. Repetitive sequence-based PCR (rep-PCR) DNA fingerprinting of bacterial genomes, p. 437-454. In F. J. de Bruijn, J. R. Lupski, and G. M. Weinstock (ed.), Bacterial genomes: physical structure and analysis. Chapman and Hall, New York, NY.
-
(1998)
Bacterial Genomes: Physical Structure and Analysis.
, pp. 437-454
-
-
Versalovic, J.V.1
De Bruijn, F.J.2
Lupski, J.R.3
-
36
-
-
33749537045
-
The taxonomy of rhizobia: An overview
-
Willems, A. 2006. The taxonomy of rhizobia: an overview. Plant Soil 287:3-14.
-
(2006)
Plant Soil
, vol.287
, pp. 3-14
-
-
Willems, A.1
-
37
-
-
72249105997
-
2010. Rapid identification of nitrogen-fixing and legume-nodulating Burkholderia species based on PCR-16S rRNA species-specific oligonucleotides
-
Wong-Villarreal, A., and J. Caballero-Mellado. 2010. Rapid identification of nitrogen-fixing and legume-nodulating Burkholderia species based on PCR-16S rRNA species-specific oligonucleotides. Syst. Appl. Microbiol. 33:35-43.
-
Syst. Appl. Microbiol.
, vol.33
, pp. 35-43
-
-
Wong-Villarreal, A.1
Caballero-Mellado, J.2
-
38
-
-
33745014381
-
Modern bacterial taxonomy: Techniques review application to bacteria that nodulate leguminous plants (BNL)
-
Zakhia, F., and P. de Lajudie. 2006. Modern bacterial taxonomy: techniques review application to bacteria that nodulate leguminous plants (BNL). Can. J. Microbiol. 52:169-181.
-
(2006)
Can. J. Microbiol.
, vol.52
, pp. 169-181
-
-
Zakhia, F.1
De Lajudie, P.2
|