-
1
-
-
0030801002
-
Gapped BLAST and PSI-BLAST: A new generation of protein database search programs
-
Altschul, S. F., T. L. Madden, A. A. Schäffer, J. Zhang, Z. Zhang, W. Miller, and D. J. Lipman. 1997. Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res. 25:3389-3402.
-
(1997)
Nucleic Acids Res.
, vol.25
, pp. 3389-3402
-
-
Altschul, S.F.1
Madden, T.L.2
Schäffer, A.A.3
Zhang, J.4
Zhang, Z.5
Miller, W.6
Lipman, D.J.7
-
2
-
-
0040596374
-
Alphabetical listing of media
-
L. C. Parks (ed.). CRC Press, Inc., Boca Raton, Fla.
-
Atlas, R. M. 1993. Alphabetical listing of media. In L. C. Parks (ed.), Handbook of microbiological media. CRC Press, Inc., Boca Raton, Fla.
-
(1993)
Handbook of Microbiological Media
-
-
Atlas, R.M.1
-
3
-
-
0002753011
-
A modified sucrose fractionation procedure for the isolation of frankiae from actinorhizal root nodules and soil samples
-
Baker, D. D., and D. O'Keefe, 1984. A modified sucrose fractionation procedure for the isolation of frankiae from actinorhizal root nodules and soil samples. Plant Soil 78:23-28.
-
(1984)
Plant Soil
, vol.78
, pp. 23-28
-
-
Baker, D.D.1
O'Keefe, D.2
-
4
-
-
0029783415
-
Amplification of 16S rRNA genes from Frankia strains in root nodules of Ceanothus griseus, Coriaria arborea, Coriaria plumose, Discaria toumatou, and Purshia tridentata
-
Benson, D. R., D. W. Stephens, M. L. Clawson, and W. B. Silvester. 1996. Amplification of 16S rRNA genes from Frankia strains in root nodules of Ceanothus griseus, Coriaria arborea, Coriaria plumose, Discaria toumatou, and Purshia tridentata. Appl. Environ. Microbiol. 62:2904-2909.
-
(1996)
Appl. Environ. Microbiol.
, vol.62
, pp. 2904-2909
-
-
Benson, D.R.1
Stephens, D.W.2
Clawson, M.L.3
Silvester, W.B.4
-
5
-
-
0029120823
-
Genetic structure of Acetobacter diazotrophicus populations and identification of a new genetically distant group
-
Caballero-Mellado, J., L. E. Fuentes-Ramírez, V. M. Reis, and E. Martínez-Romero. 1995. Genetic structure of Acetobacter diazotrophicus populations and identification of a new genetically distant group. Appl. Environ. Microbiol. 61:3008-3013.
-
(1995)
Appl. Environ. Microbiol.
, vol.61
, pp. 3008-3013
-
-
Caballero-Mellado, J.1
Fuentes-Ramírez, L.E.2
Reis, V.M.3
Martínez-Romero, E.4
-
7
-
-
0141704522
-
Isolation and identification of actinobacteria from surface-sterilized wheat roots
-
Coombs, J. T., and C. M. M. Franco. 2003. Isolation and identification of actinobacteria from surface-sterilized wheat roots. Appl. Environ. Microbiol. 69:5603-5608.
-
(2003)
Appl. Environ. Microbiol.
, vol.69
, pp. 5603-5608
-
-
Coombs, J.T.1
Franco, C.M.M.2
-
8
-
-
0031423356
-
The potential for biological control of cavity-spot disease of carrots, caused by Pythium coloratum, by streptomycete and non-streptomycete actinobacteria
-
El-Tarabily, K. A., G. E. S. J. Hardy, K. Sivasithamparam, A. M. Hussein, and D. L. Kurtboke. 1997. The potential for biological control of cavity-spot disease of carrots, caused by Pythium coloratum, by streptomycete and non-streptomycete actinobacteria. New Phytol. 137:495-507.
-
(1997)
New Phytol.
, vol.137
, pp. 495-507
-
-
El-Tarabily, K.A.1
Hardy, G.E.S.J.2
Sivasithamparam, K.3
Hussein, A.M.4
Kurtboke, D.L.5
-
9
-
-
0035378204
-
Burkholderia, a genus rich in plant-associated nitrogen fixers with wide environmental and geographic distribution
-
Estrada-de los Santos, P., M. R. Bustillos-Cristales, and J. Caballero-Mellado. 2001. Burkholderia, a genus rich in plant-associated nitrogen fixers with wide environmental and geographic distribution. Appl. Environ. Microbiol. 67:2790-2798.
-
(2001)
Appl. Environ. Microbiol.
, vol.67
, pp. 2790-2798
-
-
Estrada-De Los Santos, P.1
Bustillos-Cristales, M.R.2
Caballero-Mellado, J.3
-
10
-
-
0000461280
-
Confidence limits on phytogenies: An approach using the bootstrap
-
Felsenstein, J. 1985. Confidence limits on phytogenies: an approach using the bootstrap. Evolution 39:783-791.
-
(1985)
Evolution
, vol.39
, pp. 783-791
-
-
Felsenstein, J.1
-
12
-
-
5444265588
-
T and relatives as Burkholderia xenovorans sp. nov.
-
T and relatives as Burkholderia xenovorans sp. nov. Int. J. Syst. Evol. Microbiol. 54:1677-1681.
-
(2004)
Int. J. Syst. Evol. Microbiol.
, vol.54
, pp. 1677-1681
-
-
Goris, J.1
De Vos, P.2
Caballero-Mellado, J.3
Park, J.-H.4
Falsen, E.5
Qnensen III, J.F.6
Tiedje, J.M.7
Vandamme, P.8
-
13
-
-
0344590990
-
Identificación de actinobacterias aisladas de nódulos de Casuarina, por técnicas tradicionales y moleculares
-
Guillén, G. M., M. Valdés, J. Liao, and A. M. Hirsch. 1993. Identificación de actinobacterias aisladas de nódulos de Casuarina, por técnicas tradicionales y moleculares. Rev. Lat. Amer. Microbiol. 35:195-200.
-
(1993)
Rev. Lat. Amer. Microbiol.
, vol.35
, pp. 195-200
-
-
Guillén, G.M.1
Valdés, M.2
Liao, J.3
Hirsch, A.M.4
-
14
-
-
0026332624
-
New methods for the highly selective isolation of Micromonospora and Microbispora from soil
-
Hayakawa, M. T., T. Sadakata, T. Kijura, and H. Nonomura. 1991. New methods for the highly selective isolation of Micromonospora and Microbispora from soil. J. Ferment. Bioeng. 72:320-326.
-
(1991)
J. Ferment. Bioeng.
, vol.72
, pp. 320-326
-
-
Hayakawa, M.T.1
Sadakata, T.2
Kijura, T.3
Nonomura, H.4
-
15
-
-
0033971219
-
Intragenic relationships among Micromonospora species deduced from gyro-based phytogeny and DNA relatedness
-
Kasai, H., T. Tamura, and S. Harayama. 2000. Intragenic relationships among Micromonospora species deduced from gyro-based phytogeny and DNA relatedness. Int. J. Syst. Evol. Microbiol. 50:127-134.
-
(2000)
Int. J. Syst. Evol. Microbiol.
, vol.50
, pp. 127-134
-
-
Kasai, H.1
Tamura, T.2
Harayama, S.3
-
16
-
-
0027952597
-
Rapid identification of rhizobia by restriction fragment length polymorphism analysis of PCR-amplified 16S rRNA genes
-
Laguerre, G., M. R. Allard, F. Revoy, and N. Amarger. 1994. Rapid identification of rhizobia by restriction fragment length polymorphism analysis of PCR-amplified 16S rRNA genes. Appl. Environ. Microbiol. 60:56-63.
-
(1994)
Appl. Environ. Microbiol.
, vol.60
, pp. 56-63
-
-
Laguerre, G.1
Allard, M.R.2
Revoy, F.3
Amarger, N.4
-
17
-
-
12244276151
-
-
Tesis de Maestro en Ciencias. ENCB, IPN, México, D.F., México
-
Munive, J.-A. 1997. Características fisiológicas y quimiotaxonómicas de un nuevo grupo de actinomicetos diazótrofos. Tesis de Maestro en Ciencias. ENCB, IPN, México, D.F., México.
-
(1997)
Características Fisiológicas y Quimiotaxonómicas de un Nuevo Grupo de Actinomicetos Diazótrofos
-
-
Munive, J.-A.1
-
18
-
-
0002151087
-
Growth kinetics and nitrogenase reduction in Frankia sp. HFP ArI3 grown in batch culture
-
Murry, M. A., M. S. Fontaine, and J. G. Torrey. 1984. Growth kinetics and nitrogenase reduction in Frankia sp. HFP ArI3 grown in batch culture. Plant Soil 78:61-78.
-
(1984)
Plant Soil
, vol.78
, pp. 61-78
-
-
Murry, M.A.1
Fontaine, M.S.2
Torrey, J.G.3
-
20
-
-
0029767963
-
Analysis of partial sequences of genes coding for 16S rRNA of actinomycetes isolated from Casuarina equisetifolia nodules in Mexico
-
Niner, B. M., J. P. Brandt, M. C. Villegas, C. R. Marshall, A. M. Hirsch, and M. Valdés. 1996. Analysis of partial sequences of genes coding for 16S rRNA of actinomycetes isolated from Casuarina equisetifolia nodules in Mexico. Appl. Environ. Microbiol. 62:3034-3036.
-
(1996)
Appl. Environ. Microbiol.
, vol.62
, pp. 3034-3036
-
-
Niner, B.M.1
Brandt, J.P.2
Villegas, M.C.3
Marshall, C.R.4
Hirsch, A.M.5
Valdés, M.6
-
21
-
-
0029765445
-
Diversity of nitrogen fixation genes in the symbiotic intestinal microflora of the termite Reticulitermes speratus
-
Ohkuma, M., S. Koda, R. Usami, K. Horikoshi, and T. Kudo. 1996. Diversity of nitrogen fixation genes in the symbiotic intestinal microflora of the termite Reticulitermes speratus. Appl. Environ. Microbiol. 62:2747-2752.
-
(1996)
Appl. Environ. Microbiol.
, vol.62
, pp. 2747-2752
-
-
Ohkuma, M.1
Koda, S.2
Usami, R.3
Horikoshi, K.4
Kudo, T.5
-
22
-
-
12244298663
-
-
Tesis de Doctorado. ENCB, IPN, México, D.F., México
-
Pérez, N. O. 2001. Filogenia molecular entre actinomicetos fijadores de nitrógeno. Tesis de Doctorado. ENCB, IPN, México, D.F., México.
-
(2001)
Filogenia Molecular Entre Actinomicetos Fijadores de Nitrógeno
-
-
Pérez, N.O.1
-
23
-
-
0033502584
-
Genetic characterization of Mexican Frankia strains isolated from Casuarina equisetifolia
-
Pérez, N. O., L. Vásques, H. Olivera, and M. Valdés. 1999. Genetic characterization of Mexican Frankia strains isolated from Casuarina equisetifolia. Can. J. Bot. 77:1214-1219.
-
(1999)
Can. J. Bot.
, vol.77
, pp. 1214-1219
-
-
Pérez, N.O.1
Vásques, L.2
Olivera, H.3
Valdés, M.4
-
24
-
-
0029853148
-
WWW-Query: An on-line retrieval system for biological sequence banks
-
Perrière, G., and M. Gouy. 1996. WWW-Query: an on-line retrieval system for biological sequence banks. Biochimie 78:364-369.
-
(1996)
Biochimie
, vol.78
, pp. 364-369
-
-
Perrière, G.1
Gouy, M.2
-
25
-
-
0035116353
-
Improvement in the RFLP procedure for studying the diversity of nifH genes in communities of nitrogen fixers in soil
-
Poly, F., L. Jocteur-Monrozier, and R. Bally. 2001. Improvement in the RFLP procedure for studying the diversity of nifH genes in communities of nitrogen fixers in soil. Res. Microbiol. 152:95-103.
-
(2001)
Res. Microbiol.
, vol.152
, pp. 95-103
-
-
Poly, F.1
Jocteur-Monrozier, L.2
Bally, R.3
-
26
-
-
20844448377
-
Burkholderia tropica sp. nov., a novel nitrogen-fixing plant-associated bacterium
-
Reis, V. M., P. Estrada-de los Santos, S. Tenorio-Salgado, J. Vogel, M. Stoffels, S. Guyon, P. Mavingui, V. L. D. Baldani, M. Schmid, J. I. Baldani, J. Balandreau, A. Hartmann, and J. Caballero-Mellado. 2004. Burkholderia tropica sp. nov., a novel nitrogen-fixing plant-associated bacterium. Int. J. Syst. Evol. Microbiol. 54:2155-2162.
-
(2004)
Int. J. Syst. Evol. Microbiol.
, vol.54
, pp. 2155-2162
-
-
Reis, V.M.1
Estrada-De Los Santos, P.2
Tenorio-Salgado, S.3
Vogel, J.4
Stoffels, M.5
Guyon, S.6
Mavingui, P.7
Baldani, V.L.D.8
Schmid, M.9
Baldani, J.I.10
Balandreau, J.11
Hartmann, A.12
Caballero-Mellado, J.13
-
29
-
-
0023375195
-
The neighbor-joining method: A new method for reconstructing phylogenetic trees
-
Saitou, N., and M. Nei. 1987. The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol. Biol. Evol. 4:406-425.
-
(1987)
Mol. Biol. Evol.
, vol.4
, pp. 406-425
-
-
Saitou, N.1
Nei, M.2
-
30
-
-
0004136246
-
-
Cold Spring Harbor Laboratory Press, Cold Spring Harbor, N.Y.
-
Sambrook, J., E. F. Fritsch, and T. Maniatis. 1989. Molecular cloning: a laboratory manual, 2nd ed. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, N.Y.
-
(1989)
Molecular Cloning: A Laboratory Manual, 2nd Ed.
-
-
Sambrook, J.1
Fritsch, E.F.2
Maniatis, T.3
-
31
-
-
0001769420
-
Rapid exponential growth and increased biomass yield of some Frankia strains in buffered and stirred mineral medium (BAP) with phosphatidyl choline
-
Sehweneke, J. 1991. Rapid exponential growth and increased biomass yield of some Frankia strains in buffered and stirred mineral medium (BAP) with phosphatidyl choline. Plant Soil 136:37-41.
-
(1991)
Plant Soil
, vol.136
, pp. 37-41
-
-
Sehweneke, J.1
-
32
-
-
0028028182
-
Taxonomic note: A place for DNA-DNA reassociation and 16S rRNA sequence analysis in the present species definition in bacteriology
-
Stackebrant, E., and B. M. Goebel. 1994. Taxonomic note: a place for DNA-DNA reassociation and 16S rRNA sequence analysis in the present species definition in bacteriology. Int. J. Syst. Bacteriol. 44:846-849.
-
(1994)
Int. J. Syst. Bacteriol.
, vol.44
, pp. 846-849
-
-
Stackebrant, E.1
Goebel, B.M.2
-
33
-
-
0035196518
-
Phylogenetic analysis of the genus Actinoplanes and transfer of Actinoplanes minutapomngius Ruan et al. 1986 and 'Actinoplanes aurantiacus' to Cryplosporangium minutisporangium comb. nov. and Cryptosporangium aurantiacum sp. nov.
-
Tamura, T., and K. Hatano. 2001. Phylogenetic analysis of the genus Actinoplanes and transfer of Actinoplanes minutapomngius Ruan et al. 1986 and 'Actinoplanes aurantiacus' to Cryplosporangium minutisporangium comb. nov. and Cryptosporangium aurantiacum sp. nov. Int. J. Syst. Evol. Microbiol. 51:2119-2125.
-
(2001)
Int. J. Syst. Evol. Microbiol.
, vol.51
, pp. 2119-2125
-
-
Tamura, T.1
Hatano, K.2
-
34
-
-
0031574072
-
The CLUSTALX windows interphase: Flexible strategies for multiple sequence alignment aided by quality analysis tools
-
Thompson, J. D., T. J. Gibson, F. Plewniak, F. Jeanmougin, and D. G. Higgins. 1997. The CLUSTALX windows interphase: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res. 24:4876-4882.
-
(1997)
Nucleic Acids Res.
, vol.24
, pp. 4876-4882
-
-
Thompson, J.D.1
Gibson, T.J.2
Plewniak, F.3
Jeanmougin, F.4
Higgins, D.G.5
-
35
-
-
0034212274
-
Isolation and symbiotic characteristics of Mexican Frankia strains associated with Casuarina
-
Vásquez, L, N. O. Pérez, and M. Valdés. 2000. Isolation and symbiotic characteristics of Mexican Frankia strains associated with Casuarina. Appl. Soil Ecol. 14:249-255.
-
(2000)
Appl. Soil Ecol.
, vol.14
, pp. 249-255
-
-
Vásquez, L.1
Pérez, N.O.2
Valdés, M.3
-
36
-
-
0345369335
-
Growth and nitrogenase activity conditions of a new diazotrophic group of filamentous bacteria isolated from Casuarina root nodules
-
Villegas, M., L. Vásquez, and M. Valdés. 1997. Growth and nitrogenase activity conditions of a new diazotrophic group of filamentous bacteria isolated from Casuarina root nodules. Rev. Lat. Amer. Microbiol. 39:65-72.
-
(1997)
Rev. Lat. Amer. Microbiol.
, vol.39
, pp. 65-72
-
-
Villegas, M.1
Vásquez, L.2
Valdés, M.3
-
37
-
-
0026067797
-
16S ribosomal DNA amplification for phylogenetic study
-
Weisburg, W. G., S. M. Barns, D. A. Pelletier, and D. J. Lane. 1991. 16S ribosomal DNA amplification for phylogenetic study. J. Bacteriol. 173:697-703.
-
(1991)
J. Bacteriol.
, vol.173
, pp. 697-703
-
-
Weisburg, W.G.1
Barns, S.M.2
Pelletier, D.A.3
Lane, D.J.4
-
38
-
-
0033083698
-
Analysis of nifH gene pool complexity in soil and litter at a Douglas fir forest site in the Oregon Cascade Mountain Range
-
Widmer, F., B. T. Shaffer, L. A. Porteous, and R. J. Seidler. 1999. Analysis of nifH gene pool complexity in soil and litter at a Douglas fir forest site in the Oregon Cascade Mountain Range. Appl. Environ. Microbiol. 65:374-380.
-
(1999)
Appl. Environ. Microbiol.
, vol.65
, pp. 374-380
-
-
Widmer, F.1
Shaffer, B.T.2
Porteous, L.A.3
Seidler, R.J.4
-
39
-
-
0024746373
-
Use of degenerate oligonucleotide primers for amplification of the nifH gene from the marine cyanobacterium Tricodesmium thiebautii
-
Zehr, J., and L. McReynolds. 1989. Use of degenerate oligonucleotide primers for amplification of the nifH gene from the marine cyanobacterium Tricodesmium thiebautii. Appl. Environ. Microbiol. 55:2522-2556.
-
(1989)
Appl. Environ. Microbiol.
, vol.55
, pp. 2522-2556
-
-
Zehr, J.1
McReynolds, L.2
-
40
-
-
0031664504
-
New nitrogen-fixing microorganisms detected in oligotrophic oceans by amplification of nitrogenase (nifH) genes
-
Zehr, J., M. T. Mellon, and S. Zani. 1998. New nitrogen-fixing microorganisms detected in oligotrophic oceans by amplification of nitrogenase (nifH) genes. Appl. Environ. Microbiol. 64:3444-3450.
-
(1998)
Appl. Environ. Microbiol.
, vol.64
, pp. 3444-3450
-
-
Zehr, J.1
Mellon, M.T.2
Zani, S.3
-
41
-
-
0344219477
-
Studies of an effective strain of Frankia from Allocasuarina lehmanniana of the Casuarinaceae
-
Zhang, Z., and J. G. Torrey. 1985. Studies of an effective strain of Frankia from Allocasuarina lehmanniana of the Casuarinaceae. Plant Soil 87:1-16.
-
(1985)
Plant Soil
, vol.87
, pp. 1-16
-
-
Zhang, Z.1
Torrey, J.G.2
|