Peroxisomes in zebrafish: Distribution pattern and knockdown studies

Histochemistry and Cell Biology

Volumn 134, Issue 1, 2010, Pages 39-51

  Krysko, Olga ^a,b   Stevens, Mieke ^b   Langenberg, Tobias ^a   Fransen, Marc ^c   Espeel, Marc ^b   Baes, Myriam ^a  

^a UNIVERSITY OF LEUVEN   (Belgium)

^b GHENT UNIVERSITY   (Belgium)

^c LABORATORY OF MOLECULAR AND CELLULAR SIGNALING   (Belgium)

Author keywords

Morpholino; Peroxisomes; Zebrafish; Zellweger syndrome

Indexed keywords

CATALASE; MEMBRANE PROTEIN; MESSENGER RNA; PEROXIN;

ANIMAL CELL; ARTICLE; BIOGENESIS; CELL ORGANELLE; CONTROLLED STUDY; CYTOCHEMISTRY; EMBRYO DEVELOPMENT; ENZYME ACTIVITY; FERTILIZATION; GENE DELETION; GENE INSERTION; GENE OVEREXPRESSION; INTESTINE EPITHELIUM; KIDNEY PROXIMAL TUBULE; KIDNEY TUBULE EPITHELIUM; LIVER CELL; LIVER PARENCHYMA; MOLECULAR PROBE; NONHUMAN; NUCLEOTIDE SEQUENCE; PEROXISOME; PRIORITY JOURNAL; YOLK SAC; ZEBRA FISH;

ANIMALS; CELLS, CULTURED; GENE KNOCKDOWN TECHNIQUES; IN SITU HYBRIDIZATION; MEMBRANE PROTEINS; OLIGONUCLEOTIDES, ANTISENSE; PEROXISOMES; TISSUE DISTRIBUTION; ZEBRAFISH;

DANIO RERIO; MAMMALIA; MUS;

EID: 77954218056     PISSN: 09486143     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00418-010-0712-z     Document Type: Article

References (39)

1. M Baes PP Van Veldhoven 2006 Generalised and conditional inactivation of Pex genes in mice Biochim Biophys Acta 1763 1785 1793 10.1016/j.bbamcr.2006.08. 018 1:CAS:528:DC%2BD28XhtlakurbJ 17007945 (Pubitemid 44895471)
2. T Braunbeck G Görge V Storch R Nagel 1990 Hepatic steatosis in zebra fish (Brachydanio rerio) induced by long-term exposure to gamma- hexachlorocyclohexane Ecotoxicol Environ Saf 19 355 374 10.1016/0147-6513(90) 90036-5 1:CAS:528:DyaK3cXkslaktb4%3D 1694756 (Pubitemid 20236341)
3. T Braunbeck V Storch H Bresch 1990 Species-specific reaction of liver ultrastructure in Zebrafish (Brachydanio rerio) and trout (Salmo gairdneri) after prolonged exposure to 4-chloroaniline Arch Environ Contam Toxicol 19 405 418 10.1007/BF01054986 1:CAS:528:DyaK3cXktF2htbg%3D 2353840 (Pubitemid 20166404)
4. C Brocard A Hartig 2006 Peroxisome targeting signal 1: is it really a simple tripeptide? Biochim Biophys Acta 1763 1565 1573 10.1016/j.bbamcr.2006.08. 022 1:CAS:528:DC%2BD28Xhtlakur3L 17007944 (Pubitemid 44880463)
5. M Depreter M Espeel F Roels 2003 Human peroxisomal disorders Microsc Res Tech 61 203 223 10.1002/jemt.10330 1:CAS:528:DC%2BD3sXkslGjtbo%3D 12740827 (Pubitemid 36570104)
6. IA Drummond 2005 Kidney development and disease in the zebrafish J Am Soc Nephrol 16 299 304 10.1681/ASN.2004090754 1:CAS:528:DC%2BD2MXhvVCks7w%3D 15647335 (Pubitemid 41725124)
7. HD Fahimi 1969 Cytochemical localization of peroxidatic activity of catalase in rat hepatic microbodies (peroxisomes) J Cell Biol 43 275 288 10.1083/jcb.43.2.275 1:CAS:528:DyaE3cXptlOh 4186511
8. HA Field EA Ober T Roeser DY Stainier 2003 Formation of the digestive system in zebrafish. I. Liver morphogenesis Dev Biol 253 279 290 10.1016/S0012-1606(02)00017-9 1:CAS:528:DC%2BD3sXmt1Squg%3D%3D 12645931 (Pubitemid 36259888)
9. M Fransen T Wylin C Brees GP Mannaerts PP Van Veldhoven 2001 Human pex19p binds peroxisomal integral membrane proteins at regions distinct from their sorting sequences Mol Cell Biol 21 4413 4424 10.1128/MCB.21.13.4413-4424.2001 1:CAS:528:DC%2BD3MXksVOrtLc%3D 11390669 (Pubitemid 32565322)
10. Y Fujiki Y Matsuzono T Matsuzaki M Fransen 2006 Import of peroxisomal membrane proteins: the interplay of Pex3p- and Pex19p-mediated interactions Biochim Biophys Acta 1763 1639 1646 10.1016/j.bbamcr.2006.09.030 1:CAS:528:DC%2BD28XhtlakurvL 17069900 (Pubitemid 44880487)
11. SJ Gould JE Kalish JC Morrell J Bjorkman AJ Urquhart DI Crane 1996 Pex13p is an SH3 protein of the peroxisome membrane and a docking factor for the predominantly cytoplasmic PTS1 receptor J Cell Biol 135 85 95 10.1083/jcb.135.1.85 1:CAS:528:DyaK28XmtFWkt7o%3D 8858165 (Pubitemid 26337739)
12. CP Grou AF Carvalho MP Pinto IS Alencastre TA Rodrigues MO Freitas T Francisco C Sá-Miranda JE Azevedo 2009 The peroxisomal protein import machinery-a case report of transient ubiquitination with a new flavor Cell Mol Life Sci 66 254 262 10.1007/s00018-008-8415-5 1:CAS:528:DC%2BD1MXhtF2mt7w%3D 18810320
13. DJ Grunwald JS Eisen 2002 Headwaters of the zebrafish-emergence of a new model vertebrate Nat Rev Genet 3 717 724 10.1038/nrg892 1:CAS:528: DC%2BD38XmslagtLo%3D 12209146 (Pubitemid 34984260)
14. A Ibabe M Grabenbauer E Baumgart HD Fahimi MP Cajaraville 2002 Expression of peroxisome proliferator-activated receptors in zebrafish (Danio rerio) Histochem Cell Biol 118 231 239 1:CAS:528:DC%2BD38Xnt1Gns7k%3D 12271359
15. A Ibabe E Bilbao MP Cajaraville 2005 Expression of peroxisome proliferator-activated receptors in zebrafish (Danio rerio) depending on gender and developmental stage Histochem Cell Biol 123 75 87 10.1007/s00418-004-0737-2 1:CAS:528:DC%2BD2MXhslyrtLo%3D 15616845 (Pubitemid 40386269)
16. JM Jones JC Morrell SJ Gould 2004 PEX19 is a predominantly cytosolic chaperone and import receptor for class 1 peroxisomal membrane proteins J Cell Biol 164 57 67 10.1083/jcb.200304111 1:CAS:528:DC%2BD2cXjsVKhsw%3D%3D 14709540 (Pubitemid 38082457)
17. S Kammerer A Holzinger U Welsch AA Roscher 1998 Cloning and characterization of the gene encoding the human peroxisomal assembly protein Pex3p FEBS Lett 429 53 60 10.1016/S0014-5793(98)00557-2 1:CAS:528: DyaK1cXjsVehtbY%3D 9657383 (Pubitemid 28281245)
18. PB Lazarow 2006 The import receptor Pex7p and the PTS2 targeting sequence Biochim Biophys Acta 1763 1599 1604 10.1016/j.bbamcr.2006.08.011 1:CAS:528:DC%2BD28XhtlakurrK 16996627 (Pubitemid 44880472)
19. Y Liu J Bjorkman A Urquhart RJ Wanders DI Crane SJ Gould 1999 PEX13 is mutated in complementation group 13 of the peroxisome-biogenesis disorders Am J Hum Genet 65 621 634 10.1086/302534 1:CAS:528:DyaK1MXmt1egt7o%3D 10441568 (Pubitemid 30468706)
20. K Lorent SY Yeo T Oda S Chandrasekharappa A Chitnis RP Matthews M Pack 2004 Inhibition of jagged-mediated notch signaling disrupts zebrafish biliary development and generates multi-organ defects compatible with an Alagille syndrome phenocopy Development 131 5753 5766 10.1242/dev.01411 1:CAS:528:DC%2BD2cXhtFSgs7zF 15509774 (Pubitemid 39625217)
21. M Maxwell J Bjorkman T Nguyen P Sharp J Finnie C Paterson I Tonks BC Paton GF Kay DI Crane 2003 Pex13 inactivation in the mouse disrupts peroxisome biogenesis and leads to a Zellweger syndrome phenotype Mol Cell Biol 23 5947 5957 10.1128/MCB.23.16.5947-5957.2003 1:CAS:528:DC%2BD3sXmt1Srtbc%3D 12897163 (Pubitemid 36951355)
22. M Meinecke C Cizmowski W Schliebs V Krüger S Beck R Wagner R Erdmann 2010 The peroxisomal importomer constitutes a large and highly dynamic pore Nat Cell Biol 12 273 277 10.1038/ncb2027 1:CAS:528:DC%2BC3cXisFems7o%3D 20154681
23. Moulton JD (2007) Using morpholino to control gene expression. Curr Protoc Nucleic Acid Chem Chapter 4: Unit 4.30
24. AC Muntau PU Mayerhofer BC Paton S Kammerer AA Roscher 2000 Defective peroxisome membrane synthesis due to mutations in human PEX3 causes Zellweger syndrome, complementation group G Am J Hum Genet 67 967 975 10.1086/303071 1:CAS:528:DC%2BD3cXnsVCgsLs%3D 10958759
25. A Nasevicius SC Ekker 2000 Effective targeted gene 'knockdown' in zebrafish Nat Genet 26 216 220 10.1038/79951 1:CAS:528:DC%2BD3cXntlGmsL8%3D 11017081
26. AN Ng TA de Jong-Curtain DJ Mawdsley SJ White J Shin B Appel PD Dong DY Stainier JK Heath 2005 Formation of the digestive system in zebrafish: III. Intestinal epithelium morphogenesis Dev Biol 286 114 135 10.1016/j.ydbio.2005. 07.013 1:CAS:528:DC%2BD2MXhtVGrsb%2FI 16125164 (Pubitemid 41394051)
27. OI Petriv DB Pilgrim RA Rachubinski VI Titorenko 2002 RNA interference of peroxisome-related genes in C. elegans: a new model for human peroxisomal disorders Physiol Genomics 10 79 91 1:CAS:528:DC%2BD38XntFyjtr0%3D 12181365
28. F Roels B De Prest G De Pestel 1995 Liver and chorion cytochemistry J Inherit Metab Dis 18 Suppl 1 155 171 10.1007/BF00711437 9053549 (Pubitemid 26046032)
29. M Schrader HD Fahimi 2008 The peroxisome: still a mysterious organelle Histochem Cell Biol 129 421 440 10.1007/s00418-008-0396-9 1:CAS:528: DC%2BD1cXjsVClsbo%3D 18274771
30. N Shimozawa Y Suzuki Z Zhang A Imamura R Toyama S Mukai T Tsukamoto T Osumi T Orii RJA Wanders N Kondo 1999 Nonsense and temperature-sensitive mutations in PEX13 are the cause of complementation group H of peroxisome biogenesis disorders Hum Mol Genet 8 1077 1083 10.1093/hmg/8.6.1077 1:CAS:528:DyaK1MXjs1Wlur0%3D 10332040 (Pubitemid 29250896)
31. M Soukupova C Sprenger K Gorgas W-H Kunau G Dodt 1999 Identification and characterization of the human peroxin PEX3 Eur J Cell Biol 78 357 374 1:CAS:528:DyaK1MXkt1akur4%3D 10430017 (Pubitemid 29317372)
32. I Stalmans YS Ng R Rohan M Fruttiger A Bouche A Yuce H Fujisawa B Hermans M Shani S Jansen D Hicklin DJ Anderson T Gardiner HP Hammes L Moons M Dewerchin D Collen P Carmeliet PA D'Amore 2002 Arteriolar and venular patterning in retinas of mice selectively expressing VEGF isoforms J Clin Invest 109 327 336 1:CAS:528:DC%2BD38XhtV2isLs%3D 11827992
33. SJ Steinberg G Dodt GV Raymond NE Braverman AB Moser HW Moser 2006 Peroxisome biogenesis disorders Biochim Biophys Acta 1763 1733 1748 10.1016/j.bbamcr.2006.09.010 1:CAS:528:DC%2BD28XhtlakurnJ 17055079 (Pubitemid 44880484)
34. H Thieringer B Moellers G Dodt WH Kunau M Driscoll 2003 Modeling human peroxisome biogenesis disorders in the nematode Caenorhabditis elegans J Cell Sci 116 1797 1804 10.1242/jcs.00380 1:CAS:528:DC%2BD3sXktVGgtLw%3D 12665560 (Pubitemid 36582166)
35. B Thisse V Heyer A Lux V Alunni A Degrave I Seiliez J Kirchner JP Parkhill C Thisse 2004 Spatial and temporal expression of the zebrafish genome by large-scale in situ hybridization screening Methods Cell Biol 77 505 519 10.1016/S0091-679X(04)77027-2 1:CAS:528:DC%2BD2MXptVGmsQ%3D%3D 15602929 (Pubitemid 39752608)
36. PD Vize DW Seufert TJ Carroll JB Wallingford 1997 Model systems for the study of kidney development: use of the pronephros in the analysis of organ induction and patterning Dev Biol 188 189 204 10.1006/dbio.1997.8629 1:CAS:528:DyaK2sXlvFeku7c%3D 9268568 (Pubitemid 27394623)
37. KN Wallace S Akhter EM Smith K Lorent M Pack 2005 Intestinal growth and differentiation in zebrafish Mech Dev 122 157 173 10.1016/j.mod.2004.10.009 1:CAS:528:DC%2BD2MXkvFegtQ%3D%3D 15652704 (Pubitemid 40126676)
38. RJA Wanders HR Waterham 2006 Biochemistry of mammalian peroxisomes revisited Annu Rev Biochem 75 295 332 10.1146/annurev.biochem.74.082803.133329 1:CAS:528:DC%2BD28XosVKhs7w%3D 16756494 (Pubitemid 44118035)
39. S Yokota SH Togo M Maebuchi M Bun-Ya CM Haraguchi T Kamiryo 2002 Peroxisomes of the nematode Caenorhabditis elegans: distribution and morphological characteristics Histochem Cell Biol 118 329 336 1:CAS:528:DC%2BD38Xnslaqu7w%3D 12376829