Fabrication of uniform DNA-conjugated hydrogel microparticles via replica molding for facile nucleic acid hybridization assays

Analytical Chemistry

Volumn 82, Issue 13, 2010, Pages 5851-5858

  Lewis, Christina L ^a   Choi, Chang Hyung ^b   Lin, Yan ^a   Lee, Chang Soo ^b   Yi, Hyunmin ^a  

^a Tufts University   (United States)

^b Chungnam National University   (South Korea)

Author keywords

[No Author keywords available]

Indexed keywords

BATCH PROCESSING; BIOLOGICAL THREAT; BIOPROCESS MONITORING; CRITICAL PARAMETER; DIACRYLATES; FOOD SAFETY; HIGH-CAPACITY; HIGH-THROUGHPUT; HYBRIDIZATION ASSAY; MICRO-PARTICLES; NUCLEIC ACID HYBRIDIZATION; PENETRATION DEPTH; PHOTO-INITIATOR; REPLICA MOLDING; SEQUENCE SPECIFICITY; SINGLE-STRANDED DNA;

ASSAYS; CONFOCAL MICROSCOPY; ETHYLENE; ETHYLENE GLYCOL; FLUORESCENCE; GENES; HEALTH; MOLDING; NUCLEIC ACIDS; POLYETHYLENE GLYCOLS; POLYETHYLENE OXIDES; PROBES; PROCESSING;

DNA;

ACRYLIC ACID DERIVATIVE; DNA; FLUORESCENT DYE; MACROGOL DERIVATIVE; DNA PROBE; HYDROGEL;

ARTICLE; CHEMISTRY; DNA MICROARRAY; DNA PROBE; FLUORESCENCE MICROSCOPY; FOOD CONTROL; HYDROGEL; METHODOLOGY; PROCEDURES;

ACRYLATES; DNA; DNA PROBES; FLUORESCENT DYES; FOOD MICROBIOLOGY; HYDROGELS; MICROSCOPY, FLUORESCENCE; OLIGONUCLEOTIDE ARRAY SEQUENCE ANALYSIS; POLYETHYLENE GLYCOLS;

EID: 77954200656     PISSN: 00032700     EISSN: None     Source Type: Journal    
DOI: 10.1021/ac101032r     Document Type: Article

References (38)

1. Feng, P. Mol. Biotechnol. 1997, 7, 267-278
2. Gilbride, K. A., Lee, D. Y., and Beaudette, L. A. J. Microbiol. Methods 2006, 66, 1-20
3. Ivnitski, D., O'Neil, D. J., Gattuso, A., Schlicht, R., Calidonna, M., and Fisher, R. Biotechniques 2003, 35, 862-869
4. Hadd, A. G., Brown, J. T., Fandruss, B. F., Ye, F., and WalkerPeach, C. R. Expert Rev. Mol. Diagn. 2005, 5, 409-420
5. Call, D. R. Crit. Rev. Microbiol. 2005, 31, 91-99
6. Rehman, F. N., Audeh, M., Abrams, E. S., Hammond, P. W., Kenney, M., and Boles, T. C. Nucleic Acids Res. 1999, 27, 649-655
7. Kenney, M., Ray, S., and Boles, T. C. Biotechniques 1998, 25, 516-521
8. Fotin, A., Drobyshev, A., Proudnikov, D., Perov, A., and Mirzabekov, A. Nucleic Acids Res. 1998, 26, 1515-1521
9. Merkel, T. J., Herlihy, K. P., Nunes, J., Orgel, R. M., Rolland, J. P., and DeSimone, J. M. Langmuir DOI: 10.1021/la903890h.
10. Meiring, J. E., Schmid, M. J., Grayson, S. M., Rathsack, B. M., Johnson, D. M., Kirby, R., Kannappan, R., Manthiram, K., Hsia, B., Hogan, Z. L., Ellington, A. D., Pishko, M. V., and Willson, C. G. Chem. Mater. 2004, 16, 5574-5580
11. Dendukuri, D., Pregibon, D. C., Collins, J., Hatton, T. A., and Doyle, P. S. Nat. Mater. 2006, 5, 365-369
12. Dendukuri, D., Gu, S. S., Pregibon, D. C., Hatton, T. A., and Doyle, P. S. Lab Chip 2007, 7, 818-828
13. Chapin, S. C., Pregibon, D. C., and Doyle, P. S. Lab Chip 2009, 9, 3100-3109
14. Pregibon, D., Toner, M., and Doyle, P. S. Science 2007, 315, 1393-1396
15. Zhao, X. M., Xia, Y. N., and Whitesides, G. M. J. Mater. Chem. 1997, 7, 1069-1074
16. Xia, Y. N. and Whitesides, G. M. Annu. Rev. Mater. Sci. 1998, 28, 153-184
17. Qin, D., Xia, Y. N., and Whitesides, G. M. Nat. Protoc. 2010, 5, 491-502
18. Dendukuri, D., Panda, P., Haghgooie, R., Kim, J. M., Hatton, T. A., and Doyle, P. S. Macromolecules 2008, 41, 8547-8556
19. Odian, G. Principles of Polymerization, 4 th ed.; John Wiley & Sons Inc.: Hoboken, NJ, 2004.
20. Rolland, J. P., Maynor, B. W., Euliss, L. E., Exner, A. E., Denison, G. M., and DeSimone, J. M. J. Am. Chem. Soc. 2005, 127, 10096-10100
21. Zhang, H., Nunes, J. K., Gratton, S. E. A., Herlihy, K. P., Pohlhaus, P. D., and DeSimone, J. M. New J. Phys. 2009, 11 075018
22. Gratton, S. E. A., Williams, S. S., Napier, M. E., Pohlhaus, P. D., Zhou, Z., Wiles, K. B., Maynor, B. W., Shen, C., Olafsen, T., Samulski, E. T., and DeSimone, J. M. Acc. Chem. Res. 2008, 41, 1685-1695
23. Yi, H., Wu, L.-Q., Ghodssi, R., Rubloff, G. W., Payne, G. F., and Bentley, W. E. Anal. Chem. 2003, 76, 365-372
24. Rasband, W. S. http://rsb.info.nih.gov/ij/, U.S. National Institutes of Health: Bethesda, MD, 1997-2009.
25. Jackman, R. J., Duffy, D. C., Ostuni, E., Willmore, N. D., and Whitesides, G. M. Anal. Chem. 1998, 70, 2280-2287
26. Berthier, E., Warrick, J., Yu, H., and Beebe, D. J. Lab Chip 2008, 8, 852-859
27. Badaire, S., Cottin-Bizonne, C., Woody, J. W., Yang, A., and Stroock, A. D. J. Am. Chem. Soc. 2007, 129, 40-41
28. Lee, J. H., Prudhomme, R. K., and Aksay, I. A. J. Mater. Res. 2001, 16, 3536-3544
29. Kurdikar, D. L. and Peppas, N. A. Polymer 1995, 36, 2249-2255
30. Mellott, M. B., Searcy, K., and Pishko, M. V. Biomaterials 2001, 22, 929-941
31. Russell, R. J., Axel, A. C., Shields, K. L., and Pishko, M. V. Polymer 2001, 42, 4893-4901
32. Yershov, G., Barsky, V., Belgovskiy, A., Kirillov, E., Kreindlin, E., Ivanov, I., Parinov, S., Guschin, D., Drobishev, A., Dubiley, S., and Mirzabekov, A. Proc. Natl. Acad. Sci. U.S.A. 1996, 93, 4913-4918
33. Pregibon, D. C. and Doyle, P. S. Anal. Chem. 2009, 81, 4873-4881
34. Tan, W. S., Lewis, C. L., Horelik, N. E., Pregibon, D. C., Doyle, P. S., and Yi, H. Langmuir 2008, 24, 12483-12488
35. Revzin, A., Russell, R. J., Yadavalli, V. K., Koh, W.-G., Deister, C., Hile, D. D., Mellott, M. B., and Pishko, M. V. Langmuir 2001, 17, 5440-5447
36. Dendukuri, D., Tsoi, K., Hatton, T. A., and Doyle, P. S. Langmuir 2005, 21, 2113-2116
37. Xu, S., Nie, Z., Seo, M., Lewis, P., Kumacheva, E., Stone, H. A., Garstecki, P., Weibel, D. B., Gitlin, I., and Whitesides, G. M. Angew. Chem., Int. Ed. 2005, 44, 724-728
38. Yuet, K. P., Hwang, D. K., Haghgooie, R., and Doyle, P. S. Langmuir 2009, 26, 4281-4287