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Volumn 140, Issue 11, 2010, Pages 3132-3147

A cross-validation based estimation of the proportion of true null hypotheses

Author keywords

Cross validation; Density estimation; False discovery rate; Histograms; Multiple testing

Indexed keywords


EID: 77954176666     PISSN: 03783758     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.jspi.2010.04.014     Document Type: Article
Times cited : (23)

References (27)
  • 1
    • 77956649096 scopus 로고    scopus 로고
    • A survey of cross-validation procedures for model selection. Statistics Surveys 4, 40-79, doi: 10.1214/09-SS054
    • Arlot, S., Celisse, A., 2010. A survey of cross-validation procedures for model selection. Statistics Surveys 4, 40-79, doi: 10.1214/09-SS054.
    • (2010)
    • Arlot, S.1    Celisse, A.2
  • 3
    • 0001677717 scopus 로고
    • Controlling the false discovery rate: a practical and powerful approach to multiple testing
    • Benjamini Y., Hochberg Y. Controlling the false discovery rate: a practical and powerful approach to multiple testing. J. Roy. Statist. Soc. Ser. B 1995, 57(1):289-300.
    • (1995) J. Roy. Statist. Soc. Ser. B , vol.57 , Issue.1 , pp. 289-300
    • Benjamini, Y.1    Hochberg, Y.2
  • 4
    • 33746197428 scopus 로고    scopus 로고
    • Adaptive linear step-up procedures that control the false discovery rate
    • Benjamini Y., Krieger A.M., Yekutieli D. Adaptive linear step-up procedures that control the false discovery rate. Biometrika 2006, 93(3):491-507.
    • (2006) Biometrika , vol.93 , Issue.3 , pp. 491-507
    • Benjamini, Y.1    Krieger, A.M.2    Yekutieli, D.3
  • 5
    • 0035733108 scopus 로고    scopus 로고
    • The control of the false discovery rate in multiple testing under dependency
    • Benjamini Y., Yekutieli D. The control of the false discovery rate in multiple testing under dependency. Ann. Statist. 2001, 29(4):1165-1188.
    • (2001) Ann. Statist. , vol.29 , Issue.4 , pp. 1165-1188
    • Benjamini, Y.1    Yekutieli, D.2
  • 6
    • 25444452877 scopus 로고    scopus 로고
    • A comparative review of estimates of the proportion unchanged genes and the false discovery rate
    • Broberg P. A comparative review of estimates of the proportion unchanged genes and the false discovery rate. BMC Bioinformatics 2005, 6:199.
    • (2005) BMC Bioinformatics , vol.6 , pp. 199
    • Broberg, P.1
  • 7
    • 38349048234 scopus 로고    scopus 로고
    • Nonparametric density estimation by exact leave-p-out cross-validation
    • Celisse A., Robin S. Nonparametric density estimation by exact leave-p-out cross-validation. Comput. Statist. Data Anal. 2007, 10.1016/j.csda.2007.10.002.
    • (2007) Comput. Statist. Data Anal.
    • Celisse, A.1    Robin, S.2
  • 8
    • 0043203327 scopus 로고    scopus 로고
    • Multiple hypothesis testing in microarray experiments
    • Dudoit S., Popper Shaffer J., Boldrick J.C. Multiple hypothesis testing in microarray experiments. Statist. Sci. 2003, 18(1):71-103.
    • (2003) Statist. Sci. , vol.18 , Issue.1 , pp. 71-103
    • Dudoit, S.1    Popper Shaffer, J.2    Boldrick, J.C.3
  • 9
    • 2142732441 scopus 로고    scopus 로고
    • Large-scale simultaneous hypothesis testing: the choice of a null hypothesis
    • Efron B. Large-scale simultaneous hypothesis testing: the choice of a null hypothesis. J. Amer. Statist. Assoc. 2004, 99(465):96-104.
    • (2004) J. Amer. Statist. Assoc. , vol.99 , Issue.465 , pp. 96-104
    • Efron, B.1
  • 11
    • 10844286757 scopus 로고    scopus 로고
    • A stochastic process approach to false discovery control
    • Genovese C., Wasserman L. A stochastic process approach to false discovery control. Ann. Statist. 2004, 32(3):1035-1061.
    • (2004) Ann. Statist. , vol.32 , Issue.3 , pp. 1035-1061
    • Genovese, C.1    Wasserman, L.2
  • 12
    • 77954175290 scopus 로고    scopus 로고
    • The Elements of Statistical Learning. Springer Series in Statistics, Springer.
    • Hastie, T., Tibshirani, R., Friedman, J., 2001. The Elements of Statistical Learning. Springer Series in Statistics, Springer.
    • (2001)
    • Hastie, T.1    Tibshirani, R.2    Friedman, J.3
  • 13
    • 25144456446 scopus 로고    scopus 로고
    • Estimating the proportion of true null hypotheses, with application to DNA microarray data
    • Langaas M., Lindqvist B.H., Ferkingstad E. Estimating the proportion of true null hypotheses, with application to DNA microarray data. J. Roy. Statist. Soc. Ser. B 2005, 67(4):555-572.
    • (2005) J. Roy. Statist. Soc. Ser. B , vol.67 , Issue.4 , pp. 555-572
    • Langaas, M.1    Lindqvist, B.H.2    Ferkingstad, E.3
  • 14
    • 13844315857 scopus 로고    scopus 로고
    • Detecting multiple change-points in the mean of Gaussian process by model selection
    • Lebarbier E. Detecting multiple change-points in the mean of Gaussian process by model selection. Signal Process. 2005, 85:717-736.
    • (2005) Signal Process. , vol.85 , pp. 717-736
    • Lebarbier, E.1
  • 15
    • 33747828250 scopus 로고    scopus 로고
    • Robust estimation of the false discovery rate
    • Pounds S., Cheng C. Robust estimation of the false discovery rate. Bioinformatics 2006, 22(16):1979-1987.
    • (2006) Bioinformatics , vol.22 , Issue.16 , pp. 1979-1987
    • Pounds, S.1    Cheng, C.2
  • 16
    • 0002369909 scopus 로고
    • Empirical choice of histograms and Kernel density estimators
    • Rudemo M. Empirical choice of histograms and Kernel density estimators. Scand. J. Statist. 1982, 9:65-78.
    • (1982) Scand. J. Statist. , vol.9 , pp. 65-78
    • Rudemo, M.1
  • 17
    • 34547679628 scopus 로고    scopus 로고
    • Exploring the information in p-values for the analysis and planning of multiple-test experiments
    • Ruppert D., Nettleton D., Gene Hwang J.T. Exploring the information in p-values for the analysis and planning of multiple-test experiments. Biometrics 2007, 63:483-495.
    • (2007) Biometrics , vol.63 , pp. 483-495
    • Ruppert, D.1    Nettleton, D.2    Gene Hwang, J.T.3
  • 18
    • 14744272250 scopus 로고    scopus 로고
    • A stochastic downhill search algorithm for estimating the local false discovery rate
    • Scheid S., Spang R. A stochastic downhill search algorithm for estimating the local false discovery rate. IEEE Trans. Comput. Biol. Bioinformatics 2004, 1(3):98-108.
    • (2004) IEEE Trans. Comput. Biol. Bioinformatics , vol.1 , Issue.3 , pp. 98-108
    • Scheid, S.1    Spang, R.2
  • 19
    • 20844431881 scopus 로고    scopus 로고
    • Twilight; a bioconductor package for estimating the local false discovery rate
    • Scheid S., Spang R. Twilight; a bioconductor package for estimating the local false discovery rate. Bioinformatics 2005, 21(12):2921-2922.
    • (2005) Bioinformatics , vol.21 , Issue.12 , pp. 2921-2922
    • Scheid, S.1    Spang, R.2
  • 20
    • 0000992959 scopus 로고
    • Plots of p-values to evaluate many tests simultaneously
    • Schweder T., Spjøtvoll E. Plots of p-values to evaluate many tests simultaneously. Biometrika 1982, 69:493-502.
    • (1982) Biometrika , vol.69 , pp. 493-502
    • Schweder, T.1    Spjøtvoll, E.2
  • 21
    • 0018734781 scopus 로고
    • On optimal and data-based histograms
    • Scott D. On optimal and data-based histograms. Biometrika 1979, 66(3):605-610.
    • (1979) Biometrika , vol.66 , Issue.3 , pp. 605-610
    • Scott, D.1
  • 22
    • 21144474350 scopus 로고
    • Model selection by cross-validation
    • Shao J. Model selection by cross-validation. J. Amer. Statist. Assoc. 1993, 88(422):486-494.
    • (1993) J. Amer. Statist. Assoc. , vol.88 , Issue.422 , pp. 486-494
    • Shao, J.1
  • 23
    • 0036020892 scopus 로고    scopus 로고
    • A direct approach to false discovery rates
    • Storey J.D. A direct approach to false discovery rates. J. Roy. Statist. Soc. Ser. B 2002, 64(3):479-498.
    • (2002) J. Roy. Statist. Soc. Ser. B , vol.64 , Issue.3 , pp. 479-498
    • Storey, J.D.1
  • 24
    • 0042424602 scopus 로고    scopus 로고
    • Statistical significance for genomewide studies
    • Storey J.D., Tibshirani R. Statistical significance for genomewide studies. Proc. Nat. Acad. Sci. 2003, 100(16):9440-9445.
    • (2003) Proc. Nat. Acad. Sci. , vol.100 , Issue.16 , pp. 9440-9445
    • Storey, J.D.1    Tibshirani, R.2
  • 25
    • 1142273091 scopus 로고    scopus 로고
    • Strong control, conservative point estimation and simultaneous conservative consistency of false discovery rates: a unified approach
    • Storey J., Taylor J.E., Siegmund D. Strong control, conservative point estimation and simultaneous conservative consistency of false discovery rates: a unified approach. J. Roy. Statist. Soc. Ser. B 2004, 66(1):187-205.
    • (2004) J. Roy. Statist. Soc. Ser. B , vol.66 , Issue.1 , pp. 187-205
    • Storey, J.1    Taylor, J.E.2    Siegmund, D.3
  • 26
    • 77954177209 scopus 로고    scopus 로고
    • Asymptotic Statistics, Cambridge Series in Statistical and Probabilistic Mathematics. Cambridge University Press, Cambridge (GB), West Nyack, NY
    • van der Vaart, A.W., 1998. Asymptotic Statistics, Cambridge Series in Statistical and Probabilistic Mathematics. Cambridge University Press, Cambridge (GB), West Nyack, NY.
    • (1998)
    • van der Vaart, A.W.1
  • 27
    • 39649100346 scopus 로고    scopus 로고
    • Consistency of cross validation for comparing regression procedures
    • Yang Y. Consistency of cross validation for comparing regression procedures. Ann. Statist. 2007, 35:2450-2473.
    • (2007) Ann. Statist. , vol.35 , pp. 2450-2473
    • Yang, Y.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.