-
2
-
-
0037187833
-
A mixture model approach for the analysis of microarray gene expression data
-
D.B. Allison, G.L. Gadbury, M. Heo, J.R. Fernández, C.-K. Lee, T.A. Prolla, and R. Weindruch, "A Mixture Model Approach for the Analysis of Microarray Gene Expression Data," Computational Statistics and Data Analysis, vol. 39, pp. 1-20, 2002.
-
(2002)
Computational Statistics and Data Analysis
, vol.39
, pp. 1-20
-
-
Allison, D.B.1
Gadbury, G.L.2
Heo, M.3
Fernández, J.R.4
Lee, C.-K.5
Prolla, T.A.6
Weindruch, R.7
-
3
-
-
0001677717
-
Controlling the false discovery rate: A practical and powerful approach to multiple testing
-
Y. Benjamini and Y. Hochberg, "Controlling the False Discovery Rate: A Practical and Powerful Approach to Multiple Testing," J. Royal Statistical Soc. B, vol. 57, no. 1, pp. 289-300, 1995.
-
(1995)
J. Royal Statistical Soc. B
, vol.57
, Issue.1
, pp. 289-300
-
-
Benjamini, Y.1
Hochberg, Y.2
-
4
-
-
0035733108
-
The control of the false discovery rate in multiple testing under dependency
-
Y. Benjamini and D. Yekutieli, "The Control of the False Discovery Rate in Multiple Testing under Dependency," Annals of Statistics, vol. 29, no. 4, pp. 1165-1188, 2001.
-
(2001)
Annals of Statistics
, vol.29
, Issue.4
, pp. 1165-1188
-
-
Benjamini, Y.1
Yekutieli, D.2
-
5
-
-
14744267383
-
-
Dept. of Biostatistics, Univ. of Texas
-
K.-A. Do, P. Müller, and F. Tang, "A Bayesian Mixture Model for Differential Gene Expression," Dept. of Biostatistics, Univ. of Texas, http://odin.mdacc.tmc.edu/kim/bayesmix/, 2003.
-
(2003)
A Bayesian Mixture Model for Differential Gene Expression
-
-
Do, K.-A.1
Müller, P.2
Tang, F.3
-
6
-
-
0003477662
-
Multiple hypothesis testing in microarray experiments
-
Univ. of California at Berkeley
-
S. Dudoit, J.P. Shaffer, and J.C. Boldrick, "Multiple Hypothesis Testing in Microarray Experiments," Division of Biostatistics Working Paper Series, Univ. of California at Berkeley, no. 110, 2002.
-
(2002)
Division of Biostatistics Working Paper Series
, Issue.110
-
-
Dudoit, S.1
Shaffer, J.P.2
Boldrick, J.C.3
-
7
-
-
1542784653
-
Empirical bayes analysis of a microarray experiment
-
B. Efron, R. Tibshirani, J.D. Storey, and V. Tusher, "Empirical Bayes Analysis of a Microarray Experiment," J. Am. Statistical Assoc., vol. 96, no. 456, pp. 1151-1160, 2001.
-
(2001)
J. Am. Statistical Assoc.
, vol.96
, Issue.456
, pp. 1151-1160
-
-
Efron, B.1
Tibshirani, R.2
Storey, J.D.3
Tusher, V.4
-
8
-
-
14744274701
-
Estimating the proportion of true null hypotheses, with application to DNA microarray data
-
Dept. of Mathematical Sciences, Norwegian Univ. of Science and Technology
-
E. Ferkingstad, M. Langaas, and B. Lindqvist, "Estimating the Proportion of True Null Hypotheses, with Application to DNA Microarray Data," Preprint Series in Statistics, no. 4, Dept. of Mathematical Sciences, Norwegian Univ. of Science and Technology, http://www.math.ntnu.no/ preprint/statistics/2003/, 2003.
-
(2003)
Preprint Series in Statistics
, Issue.4
-
-
Ferkingstad, E.1
Langaas, M.2
Lindqvist, B.3
-
9
-
-
0040970668
-
On the false discovery rate and expected type I errors
-
H. Firmer and M. Roters, "On the False Discovery Rate and Expected Type I Errors," Biometrical J., vol. 43, no. 8, pp. 985-1005, 2001.
-
(2001)
Biometrical J.
, vol.43
, Issue.8
, pp. 985-1005
-
-
Firmer, H.1
Roters, M.2
-
10
-
-
10844295316
-
Bayesian and frequentist multiple testing
-
J.M. Bernardo, A.P. Dawid, J.O. Berger, M. West, D. Heckerman, M.J. Bayarri, and A.F.M. Smith, eds. Oxford Univ. Press
-
C. Genovese and L. Wasserman, "Bayesian and Frequentist Multiple Testing," Bayesian Statistics 7 - Proc. Seventh Valencia Int'l Meeting, J.M. Bernardo, A.P. Dawid, J.O. Berger, M. West, D. Heckerman, M.J. Bayarri, and A.F.M. Smith, eds. Oxford Univ. Press, 2003.
-
(2003)
Bayesian Statistics 7 - Proc. Seventh Valencia Int'l Meeting
-
-
Genovese, C.1
Wasserman, L.2
-
11
-
-
10844286757
-
A stochastic process approach to false discovery control
-
C. Genovese and L. Wasserman, "A Stochastic Process Approach to False Discovery Control," Annals of Statistics, vol. 32, no. 3, pp. 1035-1061, 2004.
-
(2004)
Annals of Statistics
, vol.32
, Issue.3
, pp. 1035-1061
-
-
Genovese, C.1
Wasserman, L.2
-
12
-
-
11244346557
-
Variance stabilization applied to microarray data calibration and to the quantification of differential expression
-
W. Huber, A. von Heydebreck, H. Sültmann, A. Poustka, and M. Vingron, "Variance Stabilization Applied to Microarray Data Calibration and to the Quantification of Differential Expression," Bioinformatics, vol. 18, suppl. 1, pp. S96-S104, 2002.
-
(2002)
Bioinformatics
, vol.18
, Issue.SUPPL. 1
-
-
Huber, W.1
Von Heydebreck, A.2
Sültmann, H.3
Poustka, A.4
Vingron, M.5
-
13
-
-
12344280017
-
Summaries of affymetrix geneChip probe level data
-
R.A. Irizarry, B.M. Bolstad, F. Collin, L.M. Cope, B. Hobbs, and T.P. Speed, "Summaries of Affymetrix GeneChip Probe Level Data," Nucleic Acids Research, vol. 31, no. 4, e15, 2003.
-
(2003)
Nucleic Acids Research
, vol.31
, Issue.4
-
-
Irizarry, R.A.1
Bolstad, B.M.2
Collin, F.3
Cope, L.M.4
Hobbs, B.5
Speed, T.P.6
-
14
-
-
8844258766
-
A mixture model for estimating the local false discovery rate in DNA microarray analysis
-
J.G. Liao, Y. Lin, Z.E. Selvanayagam, and W.J. Shih, "A Mixture Model for Estimating the Local False Discovery Rate in DNA Microarray Analysis," Bioinformatics, vol. 20, no. 16, pp. 2694-2701, 2004.
-
(2004)
Bioinformatics
, vol.20
, Issue.16
, pp. 2694-2701
-
-
Liao, J.G.1
Lin, Y.2
Selvanayagam, Z.E.3
Shih, W.J.4
-
15
-
-
14744273066
-
-
St. Jude Children's Research Hospital Memphis
-
S. Pounds, "User's Guide to BUM Library Version 1-1," St. Jude Children's Research Hospital Memphis, http://www. stjuderesearch.org/statistics/ BUM/, 2003.
-
(2003)
User's Guide to BUM Library Version 1-1
-
-
Pounds, S.1
-
16
-
-
4444294164
-
Improving false discovery rate estimation
-
S. Pounds and C. Cheng, "Improving False Discovery Rate Estimation," Bioinformatics, vol. 20, no. 11, pp. 1737-1745, 2004.
-
(2004)
Bioinformatics
, vol.20
, Issue.11
, pp. 1737-1745
-
-
Pounds, S.1
Cheng, C.2
-
17
-
-
0038156106
-
Estimating the occurrence of false positives and false negatives in microarray studies by approximating and partitioning the empirical distribution of p-values
-
S. Pounds and S.W. Morris, "Estimating the Occurrence of False Positives and False Negatives in Microarray Studies by Approximating and Partitioning the Empirical Distribution of p-Values," Bioinformatics, vol. 19, no. 10, pp. 1236-1242, 2003.
-
(2003)
Bioinformatics
, vol.19
, Issue.10
, pp. 1236-1242
-
-
Pounds, S.1
Morris, S.W.2
-
18
-
-
0037433040
-
Identifying differentially expressed genes using false discovery rate controlling procedures
-
A. Reiner, D. Yekutieli, and Y. Benjamini, "Identifying Differentially Expressed Genes Using False Discovery Rate Controlling Procedures," Bioinformatics, vol. 19, no. 3, pp. 368-375, 2003.
-
(2003)
Bioinformatics
, vol.19
, Issue.3
, pp. 368-375
-
-
Reiner, A.1
Yekutieli, D.2
Benjamini, Y.3
-
19
-
-
25444469715
-
A false discovery rate approach to separate the score distributions of induced and noninduced genes
-
S. Scheid and R. Spang, "A False Discovery Rate Approach to Separate the Score Distributions of Induced and Noninduced Genes," Proc. Third Int'l Workshop Distributed Statistical Computing, http://www.ci.tuwien.ac.at/ Conferences/DSC-2003/Proceedings/, 2003.
-
(2003)
Proc. Third Int'l Workshop Distributed Statistical Computing
-
-
Scheid, S.1
Spang, R.2
-
20
-
-
0038048164
-
Statistical issues in microarray data analysis
-
Methods in Molecular Biology, M.J. Brownstein and A.B. Khodursky, eds.
-
G.K. Smyth, Y.-H. Yang, and T.P. Speed, "Statistical Issues in Microarray Data Analysis," Functional Genomics: Methods and Protocols, Methods in Molecular Biology, M.J. Brownstein and A.B. Khodursky, eds., vol. 224, pp. 111-136, 2003.
-
(2003)
Functional Genomics: Methods and Protocols
, vol.224
, pp. 111-136
-
-
Smyth, G.K.1
Yang, Y.-H.2
Speed, T.P.3
-
21
-
-
0345822598
-
The positive false discovery rate: A bayesian interpretation and the q-value
-
J.D. Storey, "The Positive False Discovery Rate: A Bayesian Interpretation and the q-Value," Annals of Statistics, vol. 31, no. 6, pp. 2013-2035, 2003.
-
(2003)
Annals of Statistics
, vol.31
, Issue.6
, pp. 2013-2035
-
-
Storey, J.D.1
-
22
-
-
0042424602
-
Statistical significance for genomewide studies
-
J.D. Storey and R. Tibshirani, "Statistical Significance for Genomewide Studies," Proc. Nat'l Academy of Sciences, vol. 100, no. 16, pp. 9440-9445, 2003.
-
(2003)
Proc. Nat'l Academy of Sciences
, vol.100
, Issue.16
, pp. 9440-9445
-
-
Storey, J.D.1
Tibshirani, R.2
-
23
-
-
0346102887
-
Estimation of false discovery rates in multiple testing: Application to gene microarray data
-
C.-A. Tsai, H.-M. Hsueh, and J.J. Chen, "Estimation of False Discovery Rates in Multiple Testing: Application to Gene Microarray Data," Biometrics, vol. 59, no. 4, pp. 1071-1081, 2003.
-
(2003)
Biometrics
, vol.59
, Issue.4
, pp. 1071-1081
-
-
Tsai, C.-A.1
Hsueh, H.-M.2
Chen, J.J.3
-
24
-
-
0035942271
-
Significance analysis of microarrays applied to ionizing radiation response
-
V. Tusher, R. Tibshirani, and C. Chu, "Significance Analysis of Microarrays Applied to Ionizing Radiation Response," Proc. Nat'l Academy of Sciences, vol. 98, no. 9, pp. 5116-5121, 2001.
-
(2001)
Proc. Nat'l Academy of Sciences
, vol.98
, Issue.9
, pp. 5116-5121
-
-
Tusher, V.1
Tibshirani, R.2
Chu, C.3
-
25
-
-
19044399684
-
Classification, subtype discovery, and prediction of outcome in pediatric acute lymphoblastic leukemia by gene expression profiling
-
E.-J. Yeoh, M.E. Ross, S.A. Shurtleff, W.K. Williams, D. Patel, R. Mahfouz, F.G. Behm, S.C. Raimondi, M.V. Relling, A. Patel, C. Cheng, D. Campana, D. Wilkins, X. Zhou, J. Li, H. Liu, C.-H. Pui, W.E. Evans, C. Naeve, L. Wong, and J.R. Downing, "Classification, Subtype Discovery, and Prediction of Outcome in Pediatric Acute Lymphoblastic Leukemia by Gene Expression Profiling," Cancer Cell, vol. 1, pp. 133-143, 2002.
-
(2002)
Cancer Cell
, vol.1
, pp. 133-143
-
-
Yeoh, E.-J.1
Ross, M.E.2
Shurtleff, S.A.3
Williams, W.K.4
Patel, D.5
Mahfouz, R.6
Behm, F.G.7
Raimondi, S.C.8
Relling, M.V.9
Patel, A.10
Cheng, C.11
Campana, D.12
Wilkins, D.13
Zhou, X.14
Li, J.15
Liu, H.16
Pui, C.-H.17
Evans, W.E.18
Naeve, C.19
Wong, L.20
Downing, J.R.21
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