-
1
-
-
36049028058
-
New nomenclature for chromatin-modifying enzymes
-
Allis, C. D., S. L. Berger, J. Cote, S. Dent., T. Jenuwien, T. Kouzarides, L. Pillus, D. Reinberg, Y. Shi, R. Shiekhattar, A. Shilatifard, J. Workman, and Y. Zhang. 2007. New nomenclature for chromatin-modifying enzymes. Cell 131:633-636.
-
(2007)
Cell
, vol.131
, pp. 633-636
-
-
Allis, C.D.1
Berger, S.L.2
Cote, J.3
Dent, S.4
Jenuwien, T.5
Kouzarides, T.6
Pillus, L.7
Reinberg, D.8
Shi, Y.9
Shiekhattar, R.10
Shilatifard, A.11
Workman, J.12
Zhang, Y.13
-
2
-
-
34249026300
-
High-resolution profiling of histone methylations in the human genome
-
Barski, A., S. Cuddapah, K. Cui, T. Y. Roh, D. E. Schones, Z. Wang, G. Wei, I. Chepelev, and K. Zhao. 2007. High-resolution profiling of histone methylations in the human genome. Cell 129:823-837.
-
(2007)
Cell
, vol.129
, pp. 823-837
-
-
Barski, A.1
Cuddapah, S.2
Cui, K.3
Roh, T.Y.4
Schones, D.E.5
Wang, Z.6
Wei, G.7
Chepelev, I.8
Zhao, K.9
-
3
-
-
19944430797
-
Genomic maps and comparative analysis of histone modifications in human and mouse
-
Bernstein, B. E., M. Kamal, K. Lindblad-Toh, S. Bekiranov, D. K. Bailey, D. J. Huebert, S. McMahon, E. K. Karlsson, E. J. Kulbokas III, T. R. Gingeras, S. L. Schreiber, and E. S. Lander. 2005. Genomic maps and comparative analysis of histone modifications in human and mouse. Cell 120:169-181.
-
(2005)
Cell
, vol.120
, pp. 169-181
-
-
Bernstein, B.E.1
Kamal, M.2
Lindblad-Toh, K.3
Bekiranov, S.4
Bailey, D.K.5
Huebert, D.J.6
McMahon, S.7
Karlsson, E.K.8
Kulbokas III, E.J.9
Gingeras, T.R.10
Schreiber, S.L.11
Lander, E.S.12
-
4
-
-
33646200267
-
Histone H3.3 deposition at E2F-regulated genes is linked to transcription
-
Daury, L., C. Chailleux, J. Bonvallet, and D. Trouche. 2006. Histone H3.3 deposition at E2F-regulated genes is linked to transcription. EMBO Rep. 7:66-71.
-
(2006)
EMBO Rep.
, vol.7
, pp. 66-71
-
-
Daury, L.1
Chailleux, C.2
Bonvallet, J.3
Trouche, D.4
-
5
-
-
0035038209
-
Protein binding protects sites on stable episomes and in the chromosome from de novo methylation
-
Han, L., I. G. Lin, and C. L. Hsieh. 2001. Protein binding protects sites on stable episomes and in the chromosome from de novo methylation. Mol. Cell. Biol. 21:3416-3424.
-
(2001)
Mol. Cell. Biol.
, vol.21
, pp. 3416-3424
-
-
Han, L.1
Lin, I.G.2
Hsieh, C.L.3
-
6
-
-
33847334699
-
Distinct and predictive chromatin signatures of transcriptional promoters and enhancers in the human genome
-
Heintzman, N. D., R. K. Stuart, G. Hon, Y. Fu, C. W. Ching, R. D. Hawkins, L. O. Barrera, S. Van Calcar, C. Qu, K. A. Ching, W. Wang, Z. Weng, R. D. Green, G. E. Crawford, and B. Ren. 2007. Distinct and predictive chromatin signatures of transcriptional promoters and enhancers in the human genome. Nat. Genet. 39:311-318.
-
(2007)
Nat. Genet.
, vol.39
, pp. 311-318
-
-
Heintzman, N.D.1
Stuart, R.K.2
Hon, G.3
Fu, Y.4
Ching, C.W.5
Hawkins, R.D.6
Barrera, L.O.7
Van Calcar, S.8
Qu, C.9
Ching, K.A.10
Wang, W.11
Weng, Z.12
Green, R.D.13
Crawford, G.E.14
Ren, B.15
-
7
-
-
0028106737
-
Dependence of transcriptional repression on CpG methylation density
-
Hsieh, C. L. 1994. Dependence of transcriptional repression on CpG methylation density. Mol. Cell. Biol. 14:5487-5494.
-
(1994)
Mol. Cell. Biol.
, vol.14
, pp. 5487-5494
-
-
Hsieh, C.L.1
-
8
-
-
0036784594
-
DNA methylation has a local effect on transcription and histone acetylation
-
Irvine, R. A., I. G. Lin, and C. L. Hsieh. 2002. DNA methylation has a local effect on transcription and histone acetylation. Mol. Cell. Biol. 22:6689-6696.
-
(2002)
Mol. Cell. Biol.
, vol.22
, pp. 6689-6696
-
-
Irvine, R.A.1
Lin, I.G.2
Hsieh, C.L.3
-
9
-
-
23844519339
-
A high-resolution map of active promoters in the human genome
-
Kim, T. H., L. O. Barrera, M. Zheng, C. Qu, M. A. Singer, T. A. Richmond, Y. Wu, R. D. Green, and B. Ren. 2005. A high-resolution map of active promoters in the human genome. Nature 436:876-880.
-
(2005)
Nature
, vol.436
, pp. 876-880
-
-
Kim, T.H.1
Barrera, L.O.2
Zheng, M.3
Qu, C.4
Singer, M.A.5
Richmond, T.A.6
Wu, Y.7
Green, R.D.8
Ren, B.9
-
10
-
-
0035954427
-
Kinetics of core histones in living human cells: Little exchange of H3 and H4 and some rapid exchange of H2B
-
Kimura, H., and P. R. Cook. 2001. Kinetics of core histones in living human cells: little exchange of H3 and H4 and some rapid exchange of H2B. J. Cell Biol. 153:1341-1353.
-
(2001)
J. Cell Biol.
, vol.153
, pp. 1341-1353
-
-
Kimura, H.1
Cook, P.R.2
-
11
-
-
3543023310
-
Evidence for nucleosome depletion at active regulatory regions genome-wide
-
Lee, C. K., Y. Shibata, B. Rao, B. D. Strahl, and J. D. Lieb. 2004. Evidence for nucleosome depletion at active regulatory regions genome-wide. Nat. Genet. 36:900-905.
-
(2004)
Nat. Genet.
, vol.36
, pp. 900-905
-
-
Lee, C.K.1
Shibata, Y.2
Rao, B.3
Strahl, B.D.4
Lieb, J.D.5
-
12
-
-
33847070442
-
The role of chromatin during transcription
-
Li, B., M. Carey, and J. L. Workman. 2007. The role of chromatin during transcription. Cell 128:707-719.
-
(2007)
Cell
, vol.128
, pp. 707-719
-
-
Li, B.1
Carey, M.2
Workman, J.L.3
-
13
-
-
0035098525
-
Chromosomal DNA demethylation specified by protein binding
-
Lin, I. G., and C. L. Hsieh. 2001. Chromosomal DNA demethylation specified by protein binding. EMBO Rep. 2:108-112.
-
(2001)
EMBO Rep.
, vol.2
, pp. 108-112
-
-
Lin, I.G.1
Hsieh, C.L.2
-
14
-
-
0034017955
-
Modulation of DNA binding protein affinity directly affects target site demethylation
-
Lin, I. G., T. J. Tomzynski, Q. Ou, and C. L. Hsieh. 2000. Modulation of DNA binding protein affinity directly affects target site demethylation. Mol. Cell. Biol. 20:2343-2349.
-
(2000)
Mol. Cell. Biol.
, vol.20
, pp. 2343-2349
-
-
Lin, I.G.1
Tomzynski, T.J.2
Ou, Q.3
Hsieh, C.L.4
-
15
-
-
7544231794
-
Intragenic DNA methylation alters chromatin structure and elongation ef- Ficiency in mammalian cells
-
Lorincz, M. C., D. R. Dickerson, M. Schmitt, and M. Groudine. 2004. Intragenic DNA methylation alters chromatin structure and elongation ef- ficiency in mammalian cells. Nat. Struct. Mol. Biol. 11:1068-1075.
-
(2004)
Nat. Struct. Mol. Biol.
, vol.11
, pp. 1068-1075
-
-
Lorincz, M.C.1
Dickerson, D.R.2
Schmitt, M.3
Groudine, M.4
-
16
-
-
18944408348
-
Mapping global histone methylation patterns in the coding regions of human genes
-
Miao, F., and R. Natarajan. 2005. Mapping global histone methylation patterns in the coding regions of human genes. Mol. Cell. Biol. 25:4650-4661.
-
(2005)
Mol. Cell. Biol.
, vol.25
, pp. 4650-4661
-
-
Miao, F.1
Natarajan, R.2
-
17
-
-
0030606320
-
High frequency retrotransposition in cultured mammalian cells
-
Moran, J. V., S. E. Holmes, T. P. Naas, R. J. DeBerardinis, J. D. Boeke, and H. H. Kazazian, Jr. 1996. High frequency retrotransposition in cultured mammalian cells. Cell 87:917-927.
-
(1996)
Cell
, vol.87
, pp. 917-927
-
-
Moran, J.V.1
Holmes, S.E.2
Naas, T.P.3
DeBerardinis, R.J.4
Boeke, J.D.5
Kazazian Jr., H.H.6
-
18
-
-
34147197541
-
DNA methylation dictates histone H3K4 methylation
-
Okitsu, C. Y., and C. L. Hsieh. 2007. DNA methylation dictates histone H3K4 methylation. Mol. Cell. Biol. 27:2746-2757.
-
(2007)
Mol. Cell. Biol.
, vol.27
, pp. 2746-2757
-
-
Okitsu, C.Y.1
Hsieh, C.L.2
-
19
-
-
0021057040
-
Glucocorticoid regulation of transcription at an amplified, episomal promoter
-
Ostrowski, M., H. Richard-Foy, R. Wolford, D. Berard, and G. Hager. 1983. Glucocorticoid regulation of transcription at an amplified, episomal promoter. Mol. Cell. Biol. 3:2045-2057.
-
(1983)
Mol. Cell. Biol.
, vol.3
, pp. 2045-2057
-
-
Ostrowski, M.1
Richard-Foy, H.2
Wolford, R.3
Berard, D.4
Hager, G.5
-
20
-
-
33750488431
-
The genomic landscape of histone modifications in human T cells
-
Roh, T. Y., S. Cuddapah, K. Cui, and K. Zhao. 2006. The genomic landscape of histone modifications in human T cells. Proc. Natl. Acad. Sci. U. S. A. 103:15782-15787.
-
(2006)
Proc. Natl. Acad. Sci. U. S. A.
, vol.103
, pp. 15782-15787
-
-
Roh, T.Y.1
Cuddapah, S.2
Cui, K.3
Zhao, K.4
-
21
-
-
14644406272
-
Active chromatin domains are defined by acetylation islands revealed by genome-wide mapping
-
Roh, T. Y., S. Cuddapah, and K. Zhao. 2005. Active chromatin domains are defined by acetylation islands revealed by genome-wide mapping. Genes Dev. 19:542-552.
-
(2005)
Genes Dev.
, vol.19
, pp. 542-552
-
-
Roh, T.Y.1
Cuddapah, S.2
Zhao, K.3
-
23
-
-
8644287437
-
Evidence for eviction and rapid deposition of histones upon transcriptional elongation by RNA polymerase II
-
Schwabish, M. A., and K. Struhl. 2004. Evidence for eviction and rapid deposition of histones upon transcriptional elongation by RNA polymerase II. Mol. Cell. Biol. 24:10111-10117.
-
(2004)
Mol. Cell. Biol.
, vol.24
, pp. 10111-10117
-
-
Schwabish, M.A.1
Struhl, K.2
-
24
-
-
17044394787
-
Transcriptional activation triggers deposition and removal of the histone variant H3.3
-
Schwartz, B. E., and K. Ahmad. 2005. Transcriptional activation triggers deposition and removal of the histone variant H3.3. Genes Dev. 19:804-814.
-
(2005)
Genes Dev.
, vol.19
, pp. 804-814
-
-
Schwartz, B.E.1
Ahmad, K.2
-
25
-
-
36249027156
-
Recognition of trimethylated histone H3 lysine 4 facilitates the recruitment of transcription postinitiation factors and pre-mRNA splicing
-
Sims, R. J., III, S. Millhouse, C. F. Chen, B. A. Lewis, H. Erdjument-Bromage, P. Tempst, J. L. Manley, and D. Reinberg. 2007. Recognition of trimethylated histone H3 lysine 4 facilitates the recruitment of transcription postinitiation factors and pre-mRNA splicing. Mol. Cell 28:665-676.
-
(2007)
Mol. Cell
, vol.28
, pp. 665-676
-
-
Sims III, R.J.1
Millhouse, S.2
Chen, C.F.3
Lewis, B.A.4
Erdjument-Bromage, H.5
Tempst, P.6
Manley, J.L.7
Reinberg, D.8
-
26
-
-
55449096356
-
Crosstalk among histone modifications
-
Suganuma, T., and J. L. Workman. 2008. Crosstalk among histone modifications. Cell 135:604-607.
-
(2008)
Cell
, vol.135
, pp. 604-607
-
-
Suganuma, T.1
Workman, J.L.2
-
27
-
-
34848911602
-
Selective anchoring of TFIID to nucleosomes by trimethylation of histone H3 lysine 4
-
Vermeulen, M., K. W. Mulder, S. Denissov, W. W. Pijnappel, F. M. van Schaik, R. A. Varier, M. P. Baltissen, H. G. Stunnenberg, M. Mann, and H. T. Timmers. 2007. Selective anchoring of TFIID to nucleosomes by trimethylation of histone H3 lysine 4. Cell 131:58-69.
-
(2007)
Cell
, vol.131
, pp. 58-69
-
-
Vermeulen, M.1
Mulder, K.W.2
Denissov, S.3
Pijnappel, W.W.4
Van Schaik, F.M.5
Varier, R.A.6
Baltissen, M.P.7
Stunnenberg, H.G.8
Mann, M.9
Timmers, H.T.10
-
28
-
-
23744460663
-
Variant histone H3.3 is deposited at sites of nucleosomal displacement throughout transcribed genes while active histone modifications show a promoter-proximal bias
-
Wirbelauer, C., O. Bell, and D. Schubeler. 2005. Variant histone H3.3 is deposited at sites of nucleosomal displacement throughout transcribed genes while active histone modifications show a promoter-proximal bias. Genes Dev. 19:1761-1766.
-
(2005)
Genes Dev.
, vol.19
, pp. 1761-1766
-
-
Wirbelauer, C.1
Bell, O.2
Schubeler, D.3
-
29
-
-
33846155244
-
Role of DNA methylation and histone H3 lysine 27 methylation in tissue-specific imprinting of mouse Grb10
-
Yamasaki-Ishizaki, Y., T. Kayashima, C. K. Mapendano, H. Soejima, T. Ohta, H. Masuzaki, A. Kinoshita, T. Urano, K. I. Yoshiura, N. Matsumoto, T. Ishimaru, T. Mukai, N. Niikawa, and T. Kishino. 2007. Role of DNA methylation and histone H3 lysine 27 methylation in tissue-specific imprinting of mouse Grb10. Mol. Cell. Biol. 27:732-742.
-
(2007)
Mol. Cell. Biol.
, vol.27
, pp. 732-742
-
-
Yamasaki-Ishizaki, Y.1
Kayashima, T.2
Mapendano, C.K.3
Soejima, H.4
Ohta, T.5
Masuzaki, H.6
Kinoshita, A.7
Urano, T.8
Yoshiura, K.I.9
Matsumoto, N.10
Ishimaru, T.11
Mukai, T.12
Niikawa, N.13
Kishino, T.14
|