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Volumn 10, Issue 1, 2010, Pages

Evidence for an early evolutionary emergence of -type carbonic anhydrases as components of mitochondrial respiratory complex i

Author keywords

[No Author keywords available]

Indexed keywords

ALGA; BACTERIUM; BIOINFORMATICS; COMPARATIVE STUDY; ENZYME ACTIVITY; EVOLUTIONARY BIOLOGY; FUNGUS; GENOME; MASS SPECTROMETRY; MITOCHONDRIAL DNA; PHYLOGENETICS; PROTEIN;

EID: 77953335870     PISSN: None     EISSN: 14712148     Source Type: Journal    
DOI: 10.1186/1471-2148-10-176     Document Type: Article
Times cited : (44)

References (36)
  • 1
    • 33746329868 scopus 로고    scopus 로고
    • Energy converting NADH:quinone oxidoreductase (complex I)
    • 10.1146/annurev.biochem.75.103004.142539. 16756485
    • Energy converting NADH:quinone oxidoreductase (complex I). U Brandt, Annu Rev Biochem 2006 75 69 92 10.1146/annurev.biochem.75.103004.142539 16756485
    • (2006) Annu Rev Biochem , vol.75 , pp. 69-92
    • Brandt, U.1
  • 2
    • 0027519561 scopus 로고
    • The gene locus of the proton-translocating NADH: Ubiquinone oxidoreductase in Escherichia coli. Organization of the 14 genes and relationship between the derived proteins and subunits of mitochondrial complex i
    • 10.1006/jmbi.1993.1488. 7690854
    • The gene locus of the proton-translocating NADH: ubiquinone oxidoreductase in Escherichia coli. Organization of the 14 genes and relationship between the derived proteins and subunits of mitochondrial complex I. U Weidner S Geier A Ptock T Friedrich H Leif H Weiss, J Mol Biol 1993 233 109 122 10.1006/jmbi.1993.1488 7690854
    • (1993) J Mol Biol , vol.233 , pp. 109-122
    • Weidner, U.1    Geier, S.2    Ptock, A.3    Friedrich, T.4    Leif, H.5    Weiss, H.6
  • 5
    • 18044377212 scopus 로고    scopus 로고
    • Composition of complex i from Neurospora crassa and disruption of two "accessory" subunits
    • 10.1016/j.bbabio.2004.12.003. 15863099
    • Composition of complex I from Neurospora crassa and disruption of two "accessory" subunits. I Marques M Duarte J Assuncao AV Ushakova A Videira, Biochim Biophys Acta 2005 1707 211 220 10.1016/j.bbabio.2004.12.003 15863099
    • (2005) Biochim Biophys Acta , vol.1707 , pp. 211-220
    • Marques, I.1    Duarte, M.2    Assuncao, J.3    Ushakova, A.V.4    Videira, A.5
  • 6
    • 4644250423 scopus 로고    scopus 로고
    • Higher plant-like subunit composition of mitochondrial complex i from Chlamydomonas reinhardtii: 31 conserved components among eukaryotes
    • 10.1016/j.bbabio.2004.06.001. 15450959
    • Higher plant-like subunit composition of mitochondrial complex I from Chlamydomonas reinhardtii: 31 conserved components among eukaryotes. P Cardol F Vanrobaeys B Devreese J Van Beeumen RF Matagne C Remacle, Biochim Biophys Acta 2004 1658 212 224 10.1016/j.bbabio.2004.06.001 15450959
    • (2004) Biochim Biophys Acta , vol.1658 , pp. 212-224
    • Cardol, P.1    Vanrobaeys, F.2    Devreese, B.3    Van Beeumen, J.4    Matagne, R.F.5    Remacle, C.6
  • 7
    • 0038433229 scopus 로고    scopus 로고
    • Mitochondrial complex i from Arabidopsis and rice: Orthologs of mammalian and fungal components coupled with plant-specific subunits
    • 10.1016/S0005-2728(03)00045-8. 12837548
    • Mitochondrial complex I from Arabidopsis and rice: orthologs of mammalian and fungal components coupled with plant-specific subunits. JL Heazlewood KA Howell AH Millar, Biochim Biophys Acta 2003 1604 159 169 10.1016/S0005-2728(03) 00045-8 12837548
    • (2003) Biochim Biophys Acta , vol.1604 , pp. 159-169
    • Heazlewood, J.L.1    Howell, K.A.2    Millar, A.H.3
  • 8
    • 0033525788 scopus 로고    scopus 로고
    • Mitochondrial evolution
    • 10.1126/science.283.5407.1476. 10066161
    • Mitochondrial evolution. MW Gray G Burger BF Lang, Science 1999 283 1476 1481 10.1126/science.283.5407.1476 10066161
    • (1999) Science , vol.283 , pp. 1476-1481
    • Gray, M.W.1    Burger, G.2    Lang, B.F.3
  • 9
    • 17444385984 scopus 로고    scopus 로고
    • Tracing the evolution of a large protein complex in the eukaryotes, NADH:ubiquinone oxidoreductase (Complex I)
    • 10.1016/j.jmb.2005.02.067. 15843018
    • Tracing the evolution of a large protein complex in the eukaryotes, NADH:ubiquinone oxidoreductase (Complex I). T Gabaldán D Rainey MA Huynen, J Mol Biol 2005 348 857 870 10.1016/j.jmb.2005.02.067 15843018
    • (2005) J Mol Biol , vol.348 , pp. 857-870
    • Gabaldán, T.1    Rainey, D.2    Huynen, M.A.3
  • 11
    • 0028234521 scopus 로고
    • A carbonic anhydrase from the archaeon Methanosarcina thermophila
    • 10.1073/pnas.91.15.6909. 8041719
    • A carbonic anhydrase from the archaeon Methanosarcina thermophila. BE Alber JG Ferry, Proc Natl Acad Sci USA 1994 91 6909 6913 10.1073/pnas.91.15.6909 8041719
    • (1994) Proc Natl Acad Sci USA , vol.91 , pp. 6909-6913
    • Alber, B.E.1    Ferry, J.G.2
  • 12
    • 74449089655 scopus 로고    scopus 로고
    • The gamma class of carbonic anhydrases
    • 19747990
    • The gamma class of carbonic anhydrases. JG Ferry, Biochim Biophys Acta 2009 1804 374 381 19747990
    • (2009) Biochim Biophys Acta , vol.1804 , pp. 374-381
    • Ferry, J.G.1
  • 13
    • 14744270722 scopus 로고    scopus 로고
    • Structure of a mitochondrial supercomplex formed by respiratory-chain complexes i and III
    • 10.1073/pnas.0408870102. 15713802
    • Structure of a mitochondrial supercomplex formed by respiratory-chain complexes I and III. NV Dudkina H Eubel W Keegstra EJ Boekema HP Braun, Proc Natl Acad Sci USA 2005 102 3225 3229 10.1073/pnas.0408870102 15713802
    • (2005) Proc Natl Acad Sci USA , vol.102 , pp. 3225-3229
    • Dudkina, N.V.1    Eubel, H.2    Keegstra, W.3    Boekema, E.J.4    Braun, H.P.5
  • 14
    • 33646365010 scopus 로고    scopus 로고
    • Carbonic anhydrase subunits form a matrix-exposed domain attached to the membrane arm of mitochondrial complex i in plants
    • 10.1074/jbc.M511542200. 16407270
    • Carbonic anhydrase subunits form a matrix-exposed domain attached to the membrane arm of mitochondrial complex I in plants. S Sunderhaus NV Dudkina L Jansch J Klodmann J Heinemeyer M Perales E Zabaleta EJ Boekema HP Braun, J Biol Chem 2006 281 6482 6488 10.1074/jbc.M511542200 16407270
    • (2006) J Biol Chem , vol.281 , pp. 6482-6488
    • Sunderhaus, S.1    Dudkina, N.V.2    Jansch, L.3    Klodmann, J.4    Heinemeyer, J.5    Perales, M.6    Zabaleta, E.7    Boekema, E.J.8    Braun, H.P.9
  • 15
    • 20444398508 scopus 로고    scopus 로고
    • Disruption of a nuclear gene encoding a mitochondrial gamma carbonic anhydrase reduces complex i and supercomplex i + III2 levels and alters mitochondrial physiology in Arabidopsis
    • 10.1016/j.jmb.2005.04.062. 15935378
    • Disruption of a nuclear gene encoding a mitochondrial gamma carbonic anhydrase reduces complex I and supercomplex I + III2 levels and alters mitochondrial physiology in Arabidopsis. M Perales H Eubel J Heinemeyer A Colaneri E Zabaleta HP Braun, J Mol Biol 2005 350 263 277 10.1016/j.jmb.2005.04. 062 15935378
    • (2005) J Mol Biol , vol.350 , pp. 263-277
    • Perales, M.1    Eubel, H.2    Heinemeyer, J.3    Colaneri, A.4    Zabaleta, E.5    Braun, H.P.6
  • 17
    • 33845612757 scopus 로고    scopus 로고
    • Carbonic anhydrase subunits of the mitochondrial NADH dehydrogenase complex (complex I) in plants
    • DOI 10.1111/j.1399-3054.2006.00773.x
    • Carbonic anhydrase subunits of the mitochondrial NADH dehydrogenase complex (complex I) in plants. H Braun E Zabaleta, Physiol Plantarum 2007 129 114 122 10.1111/j.1399-3054.2006.00773.x (Pubitemid 44953379)
    • (2007) Physiologia Plantarum , vol.129 , Issue.1 , pp. 114-122
    • Braun, H.-P.1    Zabaleta, E.2
  • 19
    • 8544275813 scopus 로고    scopus 로고
    • Mitochondrial respiratory chain complex patterns from Acanthamoeba castellanii and Lycopersicon esculentum: Comparative analysis by BN-PAGE and evidence of protein-protein interaction between alternative oxidase and complex III
    • 10.1023/B:JOBB.0000047329.20371.bb. 15534394
    • Mitochondrial respiratory chain complex patterns from Acanthamoeba castellanii and Lycopersicon esculentum: comparative analysis by BN-PAGE and evidence of protein-protein interaction between alternative oxidase and complex III. R Navet W Jarmuszkiewicz P Douette CM Sluse-Goffart FE Sluse, J Bioenerg Biomembr 2004 36 471 479 10.1023/B:JOBB.0000047329.20371.bb 15534394
    • (2004) J Bioenerg Biomembr , vol.36 , pp. 471-479
    • Navet, R.1    Jarmuszkiewicz, W.2    Douette, P.3    Sluse-Goffart, C.M.4    Sluse, F.E.5
  • 21
    • 33747375866 scopus 로고    scopus 로고
    • Identification and preliminary characterization of two cDNAs encoding unique carbonic anhydrases from the marine alga Emiliania huxleyi
    • 10.1128/AEM.00237-06. 16885304
    • Identification and preliminary characterization of two cDNAs encoding unique carbonic anhydrases from the marine alga Emiliania huxleyi. AR Soto H Zheng D Shoemaker J Rodriguez BA Read TM Wahlund, Appl Environ Microbiol 2006 72 5500 5511 10.1128/AEM.00237-06 16885304
    • (2006) Appl Environ Microbiol , vol.72 , pp. 5500-5511
    • Soto, A.R.1    Zheng, H.2    Shoemaker, D.3    Rodriguez, J.4    Read, B.A.5    Wahlund, T.M.6
  • 22
    • 35549005324 scopus 로고    scopus 로고
    • Exploring the mitochondrial proteome of the ciliate protozoon Tetrahymena thermophila: Direct analysis by tandem mass spectrometry
    • 10.1016/j.jmb.2007.09.051. 17959197
    • Exploring the mitochondrial proteome of the ciliate protozoon Tetrahymena thermophila: direct analysis by tandem mass spectrometry. DG Smith RM Gawryluk DF Spencer RE Pearlman KW Siu MW Gray, J Mol Biol 2007 374 837 863 10.1016/j.jmb.2007.09.051 17959197
    • (2007) J Mol Biol , vol.374 , pp. 837-863
    • Smith, D.G.1    Gawryluk, R.M.2    Spencer, D.F.3    Pearlman, R.E.4    Siu, K.W.5    Gray, M.W.6
  • 23
    • 34249873947 scopus 로고    scopus 로고
    • Translocation of proteins into mitochondria
    • 10.1146/annurev.biochem.76.052705.163409. 17263664
    • Translocation of proteins into mitochondria. W Neupert JM Herrmann, Annu Rev Biochem 2007 76 723 749 10.1146/annurev.biochem.76.052705.163409 17263664
    • (2007) Annu Rev Biochem , vol.76 , pp. 723-749
    • Neupert, W.1    Herrmann, J.M.2
  • 24
    • 0034697980 scopus 로고    scopus 로고
    • Predicting subcellular localization of proteins based on their N-terminal amino acid sequence
    • 10.1006/jmbi.2000.3903. 10891285
    • Predicting subcellular localization of proteins based on their N-terminal amino acid sequence. O Emanuelsson H Nielsen S Brunak G von Heijne, J Mol Biol 2000 300 1005 1016 10.1006/jmbi.2000.3903 10891285
    • (2000) J Mol Biol , vol.300 , pp. 1005-1016
    • Emanuelsson, O.1    Nielsen, H.2    Brunak, S.3    Von Heijne, G.4
  • 25
    • 0029915525 scopus 로고    scopus 로고
    • Computational method to predict mitochondrially imported proteins and their targeting sequences
    • 10.1111/j.1432-1033.1996.00779.x. 8944766
    • Computational method to predict mitochondrially imported proteins and their targeting sequences. MG Claros P Vincens, Eur J Biochem 1996 241 779 786 10.1111/j.1432-1033.1996.00779.x 8944766
    • (1996) Eur J Biochem , vol.241 , pp. 779-786
    • Claros, M.G.1    Vincens, P.2
  • 28
    • 33646009983 scopus 로고    scopus 로고
    • Proposal for a hydrogen bond network in the active site of the prototypic gamma-class carbonic anhydrase
    • 10.1021/bi052507y. 16618104
    • Proposal for a hydrogen bond network in the active site of the prototypic gamma-class carbonic anhydrase. SA Zimmerman JG Ferry, Biochemistry 2006 45 5149 5157 10.1021/bi052507y 16618104
    • (2006) Biochemistry , vol.45 , pp. 5149-5157
    • Zimmerman, S.A.1    Ferry, J.G.2
  • 29
    • 1342282973 scopus 로고    scopus 로고
    • A role for iron in an ancient carbonic anhydrase
    • 10.1074/jbc.M311648200. 14662760
    • A role for iron in an ancient carbonic anhydrase. BC Tripp CB Bell F Cruz C Krebs JG Ferry, J Biol Chem 2004 279 6683 6687 10.1074/jbc.M311648200 14662760
    • (2004) J Biol Chem , vol.279 , pp. 6683-6687
    • Tripp, B.C.1    Bell, C.B.2    Cruz, F.3    Krebs, C.4    Ferry, J.G.5
  • 30
    • 85058251757 scopus 로고    scopus 로고
    • Analysis of 5'- or 3'-terminal tRNA editing: Mitochondrial 5' tRNA editing in Acanthamoeba castellanii as the exemplar
    • 17662843
    • Analysis of 5'- or 3'-terminal tRNA editing: mitochondrial 5' tRNA editing in Acanthamoeba castellanii as the exemplar. AJ Lohan MW Gray, Methods Enzymol 2007 424 223 242 17662843
    • (2007) Methods Enzymol , vol.424 , pp. 223-242
    • Lohan, A.J.1    Gray, M.W.2
  • 31
    • 0026409298 scopus 로고
    • Blue native electrophoresis for isolation of membrane protein complexes in enzymatically active form
    • 10.1016/0003-2697(91)90094-A. 1812789
    • Blue native electrophoresis for isolation of membrane protein complexes in enzymatically active form. H Schägger G von Jagow, Anal Biochem 1991 199 223 231 10.1016/0003-2697(91)90094-A 1812789
    • (1991) Anal Biochem , vol.199 , pp. 223-231
    • Schägger, H.1    Von Jagow, G.2
  • 32
    • 0033434080 scopus 로고    scopus 로고
    • Probability-based protein identification by searching sequence databases using mass spectrometry data
    • 10.1002/(SICI)1522-2683(19991201)20:18<3551::AID-ELPS3551>3.0. CO;2-2. 10612281
    • Probability-based protein identification by searching sequence databases using mass spectrometry data. DN Perkins DJ Pappin DM Creasy JS Cottrell, Electrophoresis 1999 20 3551 3567 10.1002/(SICI)1522-2683(19991201)20: 18<3551::AID-ELPS3551>3.0.CO;2-2 10612281
    • (1999) Electrophoresis , vol.20 , pp. 3551-3567
    • Perkins, D.N.1    Pappin, D.J.2    Creasy, D.M.3    Cottrell, J.S.4
  • 33
    • 0028941560 scopus 로고
    • The mitochondrial DNA of the amoeboid protozoon, Acanthamoeba castellanii: Complete sequence, gene content and genome organization
    • 10.1006/jmbi.1994.0043. 7844823
    • The mitochondrial DNA of the amoeboid protozoon, Acanthamoeba castellanii: complete sequence, gene content and genome organization. G Burger I Plante KM Lonergan MW Gray, J Mol Biol 1995 245 522 537 10.1006/jmbi.1994.0043 7844823
    • (1995) J Mol Biol , vol.245 , pp. 522-537
    • Burger, G.1    Plante, I.2    Lonergan, K.M.3    Gray, M.W.4
  • 35
    • 13244255415 scopus 로고    scopus 로고
    • MUSCLE: A multiple sequence alignment method with reduced time and space complexity
    • 10.1186/1471-2105-5-113. 15318951
    • MUSCLE: a multiple sequence alignment method with reduced time and space complexity. RC Edgar, BMC Bioinformatics 2004 5 113 10.1186/1471-2105-5-113 15318951
    • (2004) BMC Bioinformatics , vol.5 , pp. 113
    • Edgar, R.C.1
  • 36
    • 33750403801 scopus 로고    scopus 로고
    • RAxML-VI-HPC: Maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models
    • 10.1093/bioinformatics/btl446. 16928733
    • RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models. A Stamatakis, Bioinformatics 2006 22 2688 2690 10.1093/bioinformatics/btl446 16928733
    • (2006) Bioinformatics , vol.22 , pp. 2688-2690
    • Stamatakis, A.1


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