Recombinant plant gamma carbonic anhydrase homotrimers bind inorganic carbon

FEBS Letters

Volumn 583, Issue 21, 2009, Pages 3425-3430

  Martin, Victoria ^a   Villarreal, Fernando ^a   Miras, Isabelle ^b   Navaza, Alda ^c   Haouz, Ahmed ^b   González Lebrero, Rodolfo M ^d   Kaufman, Sergio B ^d   Zabaleta, Eduardo ^a  

^a Facultad de Ciencias Naturales e Instituto M Lillo   (Argentina)

^b CNRS   (France)

^c UNIVERSITÉ PARIS 13   (France)

^d UNIVERSIDAD DE BUENOS AIRES   (Argentina)

Author keywords

Arabidopsis thaliana; Carbon dioxide; Carbonate; Gamma carbonic anhydrase; Mitochondria

Indexed keywords

BICARBONATE; CARBON DIOXIDE; CARBONATE DEHYDRATASE; GAMMA CARBONIC ANHYDRASE; RECOMBINANT PROTEIN; UNCLASSIFIED DRUG;

AMINO ACID SEQUENCE; ARABIDOPSIS; ARTICLE; CATALYSIS; ENZYME ACTIVITY; ENZYME ASSAY; ENZYME SUBUNIT; HYDRATION; MITOCHONDRION; NONHUMAN; PHOTORESPIRATION; PRIORITY JOURNAL; PROTEIN BINDING; PROTEIN EXPRESSION; PROTEIN FUNCTION; PROTEIN PURIFICATION; SEQUENCE HOMOLOGY;

AMINO ACID SEQUENCE; ARABIDOPSIS; BICARBONATES; CARBON; CARBON RADIOISOTOPES; CARBONIC ACID; CARBONIC ANHYDRASE II; MOLECULAR SEQUENCE DATA; PROTEIN BINDING; PROTEIN MULTIMERIZATION; PROTEIN STRUCTURE, QUATERNARY; PROTEIN SUBUNITS; RECOMBINANT PROTEINS; SOLUBILITY; WATER;

ARABIDOPSIS; ARABIDOPSIS THALIANA; EUKARYOTA; METHANOSARCINA THERMOPHILA; PROKARYOTA; ZEA MAYS;

EID: 70350553817     PISSN: 00145793     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.febslet.2009.09.055     Document Type: Article

References (36)

1. Dudkina N., Eubel H., Keegstra W., Boekema E.J., and Braun H.P. Structure of a mitochondrial supercomplex formed by respiratory-chain complexes I and III. Proc. Natl. Acad. Sci. USA 102 (2005) 3225-3229
2. So A.K., Espie G.S., Williams E.B., Shively J.M., Heinhorst S., and Cannon G.C. A novel evolutionary lineage of carbonic anhydrase (epsilon class) is a component of the carboxysome shell. J. Bacteriol. 186 (2004) 623-630
3. Sawaya M.R., Cannon G.C., Heinhorst S., Tanaka S., Williams E.B., Yeates T.O., and Kerfeld C.A. The structure of beta carbonic anhydrase from the carboxysomal shell reveals a distinct subclass with one active site for the price of two. J. Biol. Chem. 281 (2006) 7546-7555
4. Zimmerman S.A., and Ferry J.G. The beta and gamma classes of carbonic anhydrase. Curr. Pharm. Des. 14 (2008) 716-721
5. Elleuche S., and Pöggeler S. Evolution of carbonic anhydrases in fungi. Curr. Genet. 55 (2009) 211-222
6. Parisi G., Perales M., Fornasari M.S., Colaneri A., González-Schain N., Gómez-Casati D., Zimmermann S., Brennicke A., Araya A., Ferry J.G., Echave J., and nad Zabaleta E. Gamma carbonic anhydrases in plant mitochondria. Plant Mol. Biol. 55 (2004) 193-207
7. Sunderhaus S., Dudkina N.V., Jänsch L., Klodmann J., Heinemeyer J., Perales M., Zabaleta E., Boekema E.J., and Braun H.P. Carbonic anhydrase subunits form a matrix-exposed domain attached to the membrane arm of mitochondrial complex I in plants. J. Biol. Chem. 281 (2006) 6482-6488
8. Heazlewood J.L., Howell K.A., and Millar A.H. Mitochondrial complex I from Arabidopsis and rice. orthologs of mammalian and fungal components coupled with plant-specific subunits. Biochim. Biophys. Acta 1604 (2003) 159-169
9. Perales M., Parisi G., Fornasari M.S., Colaneri A., Villarreal F., González-Schain N., Echave J., Gómez-Casati D., Braun H.P., Araya A., and Zabaleta E. Gamma carbonic anhydrase like complex interact with plant mitochondrial complex I. Plant Mol. Biol. 56 (2004) 947-957
10. Braun H.P., and Zabaleta E. Carbonic anhydrase subunits of the mitochondrial NADH dehydrogenase complex (complex I) in plants. Physiol. Plant 129 (2007) 114-122
11. 2 levels and alters mitochondrial physiology in Arabidopsis. J. Mol. Biol. 350 (2005) 263-277
12. Villarreal F., Martin V., Perales M., Colaneri A., González-Schain N., Martin M., Bartoli C., Braun H.P., and Zabaleta E. Ectopic expression of γCA2 causes male sterility by anther indehiscence. Plant Mol. Biol. 70 (2009) 471-485
13. Cot S.S., So A.K., and Espie G.S. A multiprotein bicarbonate dehydration complex essential to carboxysome function in cyanobacteria. J. Bacteriol. 190 (2008) 936-945
14. Tripp B., Smith K., and Ferry J.G. Carbonic anhydrase: new insights for an ancient enzyme. J. Biol. Chem. 276 (2001) 48615-48618
15. Laemmli U.K. Cleavage of structural proteins during the assembly of the head of bacteriophage T4. Nature 227 (1970) 680-685
16. Notredame C., Higgins D.G., and Heringa J. T-coffee: a novel method for fast and accurate multiple sequence alignment. J. Mol. Biol. 302 (2000) 205-217
17. Cole, C., Barber, J.D. and Barton, G.J. (2008) The Jpred 3 secondary structure prediction server. Nucleic Acids Res. doi:10.1093/nar/gkn238.
18. Shingles R., and Moroney J.V. Measurement of carbonic anhydrase activity using a sensitive fluorometric assay. Anal. Biochem. 252 (1997) 190-197
19. Armstrong J.M., Myers D.V., Verpoorte J.A., and Edsall J.T. Purification and properties of human erythrocyte carbonic anhydrases. J. Biol. Chem. 241 (1966) 5137-5149
20. Pocker Y., and Sarkanen S. Carbonic anhydrase: structure, catalytic versatility, and inhibition. Adv. Enzymol. 47 (1978) 149-274
21. 2-induced polypeptide in Chlamydomonas reinhardtii. Proc. Natl. Acad. Sci. USA 93 (1996) 12031-12034
22. Cardol P., Vanrobaeys F., Devreese B., Van Beeumen J., Matagne R.F., and Remacle C. Higher plant-like subunit composition of mitochondrial complex I from Chlamydomonas reinhardtii: 31 conserved components among eukaryotes. Biochim. Biophys. Acta 1658 (2004) 212-224
23. Fabre N., Reiter I., Becuwe-Linka N., Genty B., and Rumeau. Characterization and expression analysis of genes encoding α and β carbonic anhydrases in Arabidopsis D. Plant Cell Environ. 30 (2007) 617-629
24. Villand P., Eriksson M., and Samuelsson G. Carbon dioxide and light regulation of promoters controlling the expression of mitochondrial carbonic anhydrase in Chlamydomonas reinhardtii. Biochem. J. 327 (1997) 51-57
25. 2-induced mitochondrial carbonic anhydrase in Chlamydomonas reinhardtii. Plant Physiol. 116 (1998) 637-641
26. Giordano M., Norici A., Forssen M., Eriksson M., and Raven J.A. An anaplerotic role for mitochondrial carbonic anhydrase in Chlamydomonas reinhardtii. Plant Physiol. 132 (2003) 2126-2134
27. 2-grown cells of Chlamydomonas reinhardtii. Plant Cell Environ. 24 (2001) 261-265
28. Ludwig M., Sültemeyer D., and Price G.D. Isolation of ccmKLMN genes from the marine cyanobacterium Synechococcus sp. PCC7002 (Cyanophyceae) and evidence that CcmM is essential for carboxysome assembly. J. Phycol. 36 (2000) 1109-1118
29. 2-concentrating-mechanism (CCM): functional components, Ci transporters, diversity, genetic regulation and prospects for engineering into plants. J. Exp. Bot. 59 (2008) 1441-1461
30. Iverson T.M., Alber B.E., Kisker C., Ferry J.G., and Rees D.C. A closer look at the active site of gamma-class carbonic anhydrases: high-resolution crystallographic studies of the carbonic anhydrase from Methanosarcina thermophila. Biochemistry 39 (2000) 9222-9231
31. Tripp B.C., and Ferry J.G. A structure-function study of a proton transport pathway in the γ-class carbonic anhydrase from Methanosarcina thermophila. Biochemistry 39 (2000) 9232-9240
32. Tu C., Rowlett R.S., Tripp B.C., and Ferry J.G. Chemical rescue of proton transfer in catalysis by carbonic anhydrases in the beta- and gamma-class. Biochemistry 41 (2002) 15429-15436
33. 2-concentrating mechanism in Synechococcus sp. PCC7942 through a redox independent pathway. Plant Physiol. 133 (2003) 2069-2080
34. 2 and carbonic anhydrase. Phys. Plant 128 (2006) 763-772
35. Peters K., Dudkina N.V., Jänsch L., Braun H.P., and Boekema E.J. A structural investigation of complex I and I? III2 supercomplex from Zea mays at 11-13 Å resolution: assignment of the carbonic anhydrase domain and evidence for structural heterogeneity within complex I. Biochim. Biophys. Acta 1777 (2008) 84-93
36. 4 photosynthesis. Plant Physiol. 125 (2001) 46-49