-
1
-
-
84950129530
-
Bioaugmentation for remediation of chlorinated solvents: technology development, status, and research needs
-
GeoSyntec, C. (2005) Bioaugmentation for remediation of chlorinated solvents: technology development, status, and research needs. Environmental Security Technology Certification Program (ESTCP), 122.
-
(2005)
Environmental Security Technology Certification Program (ESTCP)
, pp. 122
-
-
GeoSyntec, C.1
-
2
-
-
48349107135
-
Dioxin- and POP-contaminated sites-contemporary and future relevance and challenges
-
Weber R., et al. Dioxin- and POP-contaminated sites-contemporary and future relevance and challenges. Environ. Sci. Pollut. Res. Int. 2008, 15:363-393.
-
(2008)
Environ. Sci. Pollut. Res. Int.
, vol.15
, pp. 363-393
-
-
Weber, R.1
-
3
-
-
73649122427
-
Localized plasticity in the streamlined genomes of vinyl chloride respiring Dehalococcoides
-
McMurdie P.J., et al. Localized plasticity in the streamlined genomes of vinyl chloride respiring Dehalococcoides. PLoS Genet. 2009, 5:e1000714.
-
(2009)
PLoS Genet.
, vol.5
-
-
McMurdie, P.J.1
-
4
-
-
34948844066
-
Reductive dechlorination of chloroethenes by Dehalococcoides-containing cultures enriched from a polychlorinated-dioxin-contaminated microcosm
-
Futamata H., et al. Reductive dechlorination of chloroethenes by Dehalococcoides-containing cultures enriched from a polychlorinated-dioxin-contaminated microcosm. ISME J. 2007, 1:471-479.
-
(2007)
ISME J.
, vol.1
, pp. 471-479
-
-
Futamata, H.1
-
5
-
-
67649603398
-
Biodiversity of dehalorespiring bacteria with special emphasis on polychlorinated biphenyl/dioxin dechlorinators
-
Hiraishi A. Biodiversity of dehalorespiring bacteria with special emphasis on polychlorinated biphenyl/dioxin dechlorinators. Microbes Environ. 2008, 23:1-12.
-
(2008)
Microbes Environ.
, vol.23
, pp. 1-12
-
-
Hiraishi, A.1
-
6
-
-
33744930596
-
Harnessing microbial activities for environmental cleanup
-
Löffler F.E., Edwards E.A. Harnessing microbial activities for environmental cleanup. Curr. Opin. Biotechnol. 2006, 17:274-284.
-
(2006)
Curr. Opin. Biotechnol.
, vol.17
, pp. 274-284
-
-
Löffler, F.E.1
Edwards, E.A.2
-
7
-
-
27144500225
-
Genome sequence of the chlorinated compound-respiring bacterium Dehalococcoides species strain CBDB1
-
Kube M., et al. Genome sequence of the chlorinated compound-respiring bacterium Dehalococcoides species strain CBDB1. Nat. Biotechnol. 2005, 23:1269-1273.
-
(2005)
Nat. Biotechnol.
, vol.23
, pp. 1269-1273
-
-
Kube, M.1
-
8
-
-
33845644147
-
An ecologist's guide to ecogenomics
-
Ouborg N.J., Vriezen W.H. An ecologist's guide to ecogenomics. J. Ecol. 2007, 95:8-16.
-
(2007)
J. Ecol.
, vol.95
, pp. 8-16
-
-
Ouborg, N.J.1
Vriezen, W.H.2
-
9
-
-
34248179977
-
Unravelling microbial communities with DNA-microarrays: challenges and future directions
-
Wagner M., et al. Unravelling microbial communities with DNA-microarrays: challenges and future directions. Microb. Ecol. 2007, 53:498-506.
-
(2007)
Microb. Ecol.
, vol.53
, pp. 498-506
-
-
Wagner, M.1
-
10
-
-
19944426081
-
Genome sequence of the PCE-dechlorinating bacterium Dehalococcoides ethenogenes
-
Seshadri R., et al. Genome sequence of the PCE-dechlorinating bacterium Dehalococcoides ethenogenes. Science 2005, 307:105.
-
(2005)
Science
, vol.307
, pp. 105
-
-
Seshadri, R.1
-
11
-
-
57049091573
-
Systems biology approaches to bioremediation
-
de Lorenzo V. Systems biology approaches to bioremediation. Curr. Opin. Biotechnol. 2008, 19:579-589.
-
(2008)
Curr. Opin. Biotechnol.
, vol.19
, pp. 579-589
-
-
de Lorenzo, V.1
-
12
-
-
33645573753
-
Transcriptomics, proteomics and interactomics: unique approaches to track the insights of bioremediation
-
Singh O.V., Nagaraj N.S. Transcriptomics, proteomics and interactomics: unique approaches to track the insights of bioremediation. Brief. Funct. Genomic. Proteomic. 2006, 4:355-362.
-
(2006)
Brief. Funct. Genomic. Proteomic.
, vol.4
, pp. 355-362
-
-
Singh, O.V.1
Nagaraj, N.S.2
-
13
-
-
3342951235
-
Genomics for the ecological toolbox
-
Thomas M.A., Klaper R. Genomics for the ecological toolbox. Trends Ecol. Evol. 2004, 19:439-445.
-
(2004)
Trends Ecol. Evol.
, vol.19
, pp. 439-445
-
-
Thomas, M.A.1
Klaper, R.2
-
14
-
-
47749126600
-
The mosaic genome of Anaeromyxobacter dehalogenans strain 2CP-C suggests an aerobic common ancestor to the Delta-Proteobacteria
-
Thomas S.H., et al. The mosaic genome of Anaeromyxobacter dehalogenans strain 2CP-C suggests an aerobic common ancestor to the Delta-Proteobacteria. PLoS ONE 2008, 3:e2103.
-
(2008)
PLoS ONE
, vol.3
-
-
Thomas, S.H.1
-
15
-
-
33644854231
-
Complete genome sequence of the dehalorespiring bacterium Desulfitobacterium hafniense Y51 and comparison with Dehalococcoides ethenogenes 195
-
Nonaka H., et al. Complete genome sequence of the dehalorespiring bacterium Desulfitobacterium hafniense Y51 and comparison with Dehalococcoides ethenogenes 195. J. Bacteriol. 2006, 188:2262.
-
(2006)
J. Bacteriol.
, vol.188
, pp. 2262
-
-
Nonaka, H.1
-
16
-
-
33746919911
-
The Desulfitobacterium genus
-
Villemur R., et al. The Desulfitobacterium genus. FEMS Microbiol. Rev. 2006, 30:706-733.
-
(2006)
FEMS Microbiol. Rev.
, vol.30
, pp. 706-733
-
-
Villemur, R.1
-
17
-
-
0038264087
-
Detoxification of vinyl chloride to ethene coupled to growth of an anaerobic bacterium
-
He J., et al. Detoxification of vinyl chloride to ethene coupled to growth of an anaerobic bacterium. Nature 2003, 424:62.
-
(2003)
Nature
, vol.424
, pp. 62
-
-
He, J.1
-
19
-
-
41349099621
-
Biochemical and genetic bases of dehalorespiration
-
Futagami T., et al. Biochemical and genetic bases of dehalorespiration. Chem. Rec. 2008, 8:1-12.
-
(2008)
Chem. Rec.
, vol.8
, pp. 1-12
-
-
Futagami, T.1
-
20
-
-
33747346996
-
Temporal expression of respiratory genes in an enrichment culture containing Dehalococcoides ethenogenes
-
Rahm B.G., et al. Temporal expression of respiratory genes in an enrichment culture containing Dehalococcoides ethenogenes. Appl. Environ. Microbiol. 2006, 72:5486.
-
(2006)
Appl. Environ. Microbiol.
, vol.72
, pp. 5486
-
-
Rahm, B.G.1
-
21
-
-
0029895362
-
Purification and characterization of tetrachloroethene reductive dehalogenase from Dehalospirillum multivorans
-
Neumann A., et al. Purification and characterization of tetrachloroethene reductive dehalogenase from Dehalospirillum multivorans. J. Biol. Chem. 1996, 271:16515.
-
(1996)
J. Biol. Chem.
, vol.271
, pp. 16515
-
-
Neumann, A.1
-
22
-
-
0033575218
-
Purification and molecular characterization of ortho-chlorophenol reductive dehalogenase, a key enzyme of halorespiration in Desulfitobacterium dehalogenans
-
van de Pas B.A., et al. Purification and molecular characterization of ortho-chlorophenol reductive dehalogenase, a key enzyme of halorespiration in Desulfitobacterium dehalogenans. J. Biol. Chem. 1999, 274:20287.
-
(1999)
J. Biol. Chem.
, vol.274
, pp. 20287
-
-
van de Pas, B.A.1
-
23
-
-
38449091968
-
Identification of a chlorobenzene reductive dehalogenase in Dehalococcoides sp. strain CBDB1
-
Adrian L., et al. Identification of a chlorobenzene reductive dehalogenase in Dehalococcoides sp. strain CBDB1. Appl. Environ. Microbiol. 2007, 73:7717-7724.
-
(2007)
Appl. Environ. Microbiol.
, vol.73
, pp. 7717-7724
-
-
Adrian, L.1
-
24
-
-
8144229485
-
Genetic identification of a putative vinyl chloride reductase in Dehalococcoides sp. strain BAV1
-
Krajmalnik-Brown R., et al. Genetic identification of a putative vinyl chloride reductase in Dehalococcoides sp. strain BAV1. Appl. Environ. Microbiol. 2004, 70:6347-6351.
-
(2004)
Appl. Environ. Microbiol.
, vol.70
, pp. 6347-6351
-
-
Krajmalnik-Brown, R.1
-
25
-
-
4143085164
-
Molecular identification of the catabolic vinyl chloride reductase from Dehalococcoides sp. strain VS and its environmental distribution
-
Müller J.A., et al. Molecular identification of the catabolic vinyl chloride reductase from Dehalococcoides sp. strain VS and its environmental distribution. Appl. Environ. Microbiol. 2004, 70:4880-4888.
-
(2004)
Appl. Environ. Microbiol.
, vol.70
, pp. 4880-4888
-
-
Müller, J.A.1
-
26
-
-
4143110165
-
Purification, cloning, and sequencing of a 3,5-dichlorophenol reductive dehalogenase from Desulfitobacterium frappieri PCP-1
-
Thibodeau J., et al. Purification, cloning, and sequencing of a 3,5-dichlorophenol reductive dehalogenase from Desulfitobacterium frappieri PCP-1. Appl. Environ. Microbiol. 2004, 70:4532-4537.
-
(2004)
Appl. Environ. Microbiol.
, vol.70
, pp. 4532-4537
-
-
Thibodeau, J.1
-
27
-
-
0036436529
-
Occurrence of several genes encoding putative reductive dehalogenases in Desulfitobacterium hafniense/frappieri and Dehalococcoides ethenogenes
-
Villemur R., et al. Occurrence of several genes encoding putative reductive dehalogenases in Desulfitobacterium hafniense/frappieri and Dehalococcoides ethenogenes. Can. J. Microbiol. 2002, 48:697-706.
-
(2002)
Can. J. Microbiol.
, vol.48
, pp. 697-706
-
-
Villemur, R.1
-
28
-
-
58949089922
-
Divergent roles of CprK paralogues from Desulfitobacterium hafniense in activating gene expression
-
Gabor K., et al. Divergent roles of CprK paralogues from Desulfitobacterium hafniense in activating gene expression. Microbiology 2008, 154:3686-3696.
-
(2008)
Microbiology
, vol.154
, pp. 3686-3696
-
-
Gabor, K.1
-
29
-
-
63849108021
-
Transcription analysis of genes encoding homologues of reductive dehalogenases in Dehalococcoides sp. strain CBDB1 by using terminal restriction fragment length polymorphism and quantitative PCR
-
Wagner A., et al. Transcription analysis of genes encoding homologues of reductive dehalogenases in Dehalococcoides sp. strain CBDB1 by using terminal restriction fragment length polymorphism and quantitative PCR. Appl. Environ. Microbiol. 2009, 75:1876-1884.
-
(2009)
Appl. Environ. Microbiol.
, vol.75
, pp. 1876-1884
-
-
Wagner, A.1
-
30
-
-
9644265299
-
Regulation of anaerobic dehalorespiration by the transcriptional activator CprK
-
Pop S.M., et al. Regulation of anaerobic dehalorespiration by the transcriptional activator CprK. J. Biol. Chem. 2004, 279:49910-49918.
-
(2004)
J. Biol. Chem.
, vol.279
, pp. 49910-49918
-
-
Pop, S.M.1
-
31
-
-
33645232936
-
Characterization of CprK1, a CRP/FNR-type transcriptional regulator of halorespiration from Desulfitobacterium hafniense
-
Gabor K., et al. Characterization of CprK1, a CRP/FNR-type transcriptional regulator of halorespiration from Desulfitobacterium hafniense. J. Bacteriol. 2006, 188:2604-2613.
-
(2006)
J. Bacteriol.
, vol.188
, pp. 2604-2613
-
-
Gabor, K.1
-
32
-
-
51649098521
-
Molecular basis of halorespiration control by CprK, a CRP-FNR type transcriptional regulator
-
Levy C., et al. Molecular basis of halorespiration control by CprK, a CRP-FNR type transcriptional regulator. Mol. Microbiol. 2008, 70:151-167.
-
(2008)
Mol. Microbiol.
, vol.70
, pp. 151-167
-
-
Levy, C.1
-
33
-
-
34547220974
-
Expression of reductive dehalogenase genes in Dehalococcoides ethenogenes strain 195 growing on tetrachloroethene, trichloroethene, or 2,3-dichlorophenol
-
Fung J.M., et al. Expression of reductive dehalogenase genes in Dehalococcoides ethenogenes strain 195 growing on tetrachloroethene, trichloroethene, or 2,3-dichlorophenol. Appl. Environ. Microbiol. 2007, 73:4439-4445.
-
(2007)
Appl. Environ. Microbiol.
, vol.73
, pp. 4439-4445
-
-
Fung, J.M.1
-
34
-
-
29144480680
-
Multiple reductive-dehalogenase-homologous genes are simultaneously transcribed during dechlorination by Dehalococcoides-containing cultures
-
Waller A.S., et al. Multiple reductive-dehalogenase-homologous genes are simultaneously transcribed during dechlorination by Dehalococcoides-containing cultures. Appl. Environ. Microbiol. 2005, 71:8257-8264.
-
(2005)
Appl. Environ. Microbiol.
, vol.71
, pp. 8257-8264
-
-
Waller, A.S.1
-
35
-
-
48249093350
-
Dehalococcoides; gene transcripts as quantitative bioindicators of tetrachloroethene, trichloroethene, and cis-1,2-dichloroethene dehalorespiration rates
-
Rahm B.G., Richardson R.E. Dehalococcoides; gene transcripts as quantitative bioindicators of tetrachloroethene, trichloroethene, and cis-1,2-dichloroethene dehalorespiration rates. Environ. Sci. Technol. 2008, 42:5099-5105.
-
(2008)
Environ. Sci. Technol.
, vol.42
, pp. 5099-5105
-
-
Rahm, B.G.1
Richardson, R.E.2
-
36
-
-
55049091180
-
Characterization of the community structure of a dechlorinating mixed culture and comparisons of gene expression in planktonic and biofloc-associated Dehalococcoides and Methanospirillum species
-
Rowe A.R., et al. Characterization of the community structure of a dechlorinating mixed culture and comparisons of gene expression in planktonic and biofloc-associated Dehalococcoides and Methanospirillum species. Appl. Environ. Microbiol. 2008, 74:6709-6719.
-
(2008)
Appl. Environ. Microbiol.
, vol.74
, pp. 6709-6719
-
-
Rowe, A.R.1
-
37
-
-
23744455645
-
Reductive dechlorination of beta-hexachlorocyclohexane (β-HCH) by a Dehalobacter species in coculture with a Sedimentibacter sp
-
van Doesburg W., et al. Reductive dechlorination of beta-hexachlorocyclohexane (β-HCH) by a Dehalobacter species in coculture with a Sedimentibacter sp. FEMS Microbiol. Ecol. 2005, 54:87-95.
-
(2005)
FEMS Microbiol. Ecol.
, vol.54
, pp. 87-95
-
-
van Doesburg, W.1
-
38
-
-
37449031396
-
Real-time PCR quantification of Dehalococcoides populations: methods and applications
-
Cupples A.M. Real-time PCR quantification of Dehalococcoides populations: methods and applications. J. Microbiol. Methods 2008, 72:1-11.
-
(2008)
J. Microbiol. Methods
, vol.72
, pp. 1-11
-
-
Cupples, A.M.1
-
39
-
-
57449118500
-
Advantages and limitations of quantitative PCR (Q-PCR)-based approaches in microbial ecology
-
Smith C.J., Osborn A.M. Advantages and limitations of quantitative PCR (Q-PCR)-based approaches in microbial ecology. FEMS Microbiol. Ecol. 2009, 67:6-20.
-
(2009)
FEMS Microbiol. Ecol.
, vol.67
, pp. 6-20
-
-
Smith, C.J.1
Osborn, A.M.2
-
40
-
-
2342555069
-
Development of a real-time PCR method for quantification of the three genera Dehalobacter, Dehalococcoides, and Desulfitobacterium in microbial communities
-
Smits T.H., et al. Development of a real-time PCR method for quantification of the three genera Dehalobacter, Dehalococcoides, and Desulfitobacterium in microbial communities. J. Microbiol. Methods 2004, 57:369-378.
-
(2004)
J. Microbiol. Methods
, vol.57
, pp. 369-378
-
-
Smits, T.H.1
-
41
-
-
43049130733
-
Quantifying genes and transcripts to assess the in situ physiology of Dehalococcoides spp. in a trichloroethene-contaminated groundwater site
-
Lee P.K.H., et al. Quantifying genes and transcripts to assess the in situ physiology of Dehalococcoides spp. in a trichloroethene-contaminated groundwater site. Appl. Environ. Microbiol. 2008, 74:2728-2739.
-
(2008)
Appl. Environ. Microbiol.
, vol.74
, pp. 2728-2739
-
-
Lee, P.K.H.1
-
42
-
-
51149084296
-
Detection and identification of Dehalococcoides species responsible for in situ dechlorination of trichloroethene to ethene enhanced by hydrogen-releasing compounds
-
Nishimura M., et al. Detection and identification of Dehalococcoides species responsible for in situ dechlorination of trichloroethene to ethene enhanced by hydrogen-releasing compounds. Biotechnol. Appl. Biochem. 2008, 51:1-7.
-
(2008)
Biotechnol. Appl. Biochem.
, vol.51
, pp. 1-7
-
-
Nishimura, M.1
-
43
-
-
48749095131
-
Oxygen effect on Dehalococcoides viability and biomarker quantification
-
Amos B.K., et al. Oxygen effect on Dehalococcoides viability and biomarker quantification. Environ. Sci. Technol. 2008, 42:5718-5726.
-
(2008)
Environ. Sci. Technol.
, vol.42
, pp. 5718-5726
-
-
Amos, B.K.1
-
44
-
-
58149143148
-
Concurrent ethene generation and growth of Dehalococcoides containing vinyl chloride reductive dehalogenase genes during an enhanced reductive dechlorination field demonstration
-
Scheutz C., et al. Concurrent ethene generation and growth of Dehalococcoides containing vinyl chloride reductive dehalogenase genes during an enhanced reductive dechlorination field demonstration. Environ. Sci. Technol. 2008, 42:9302-9309.
-
(2008)
Environ. Sci. Technol.
, vol.42
, pp. 9302-9309
-
-
Scheutz, C.1
-
45
-
-
67650482588
-
Tracking functional guilds: Dehalococcoides spp. in European river basins contaminated with hexachlorobenzene
-
Taş N., et al. Tracking functional guilds: Dehalococcoides spp. in European river basins contaminated with hexachlorobenzene. Appl. Environ. Microbiol. 2009, 75:4696-4704.
-
(2009)
Appl. Environ. Microbiol.
, vol.75
, pp. 4696-4704
-
-
Taş, N.1
-
46
-
-
70450277146
-
Dehalogenimonas lykanthroporepellens gen. nov., sp nov., a reductively dehalogenating bacterium isolated from chlorinated solvent-contaminated groundwater
-
Moe W.M., et al. Dehalogenimonas lykanthroporepellens gen. nov., sp nov., a reductively dehalogenating bacterium isolated from chlorinated solvent-contaminated groundwater. Int. J. Syst. Evol. Microbiol. 2009, 59:2692-2697.
-
(2009)
Int. J. Syst. Evol. Microbiol.
, vol.59
, pp. 2692-2697
-
-
Moe, W.M.1
-
47
-
-
43449127197
-
Novel uncultured Chloroflexi dechlorinate perchloroethene to trans-dichloroethene in tidal flat sediments
-
Kittelmann S., Friedrich M.W. Novel uncultured Chloroflexi dechlorinate perchloroethene to trans-dichloroethene in tidal flat sediments. Environ. Microbiol. 2008, 10:1557-1570.
-
(2008)
Environ. Microbiol.
, vol.10
, pp. 1557-1570
-
-
Kittelmann, S.1
Friedrich, M.W.2
-
48
-
-
53949122025
-
Biostimulation and bioaugmentation to enhance dechlorination of polychlorinated dibenzo-p-dioxins in contaminated sediments
-
Ahn Y.B., et al. Biostimulation and bioaugmentation to enhance dechlorination of polychlorinated dibenzo-p-dioxins in contaminated sediments. FEMS Microbiol. Ecol. 2008, 66:271-281.
-
(2008)
FEMS Microbiol. Ecol.
, vol.66
, pp. 271-281
-
-
Ahn, Y.B.1
-
49
-
-
33644954959
-
Quantitative PCR confirms purity of strain GT, a novel trichloroethene-to-ethene-respiring Dehalococcoides isolate
-
Sung Y., et al. Quantitative PCR confirms purity of strain GT, a novel trichloroethene-to-ethene-respiring Dehalococcoides isolate. Appl. Environ. Microbiol. 2006, 72:1980.
-
(2006)
Appl. Environ. Microbiol.
, vol.72
, pp. 1980
-
-
Sung, Y.1
-
50
-
-
65549166732
-
Characterization of a Dehalobacter coculture that dechlorinates 1,2-dichloroethane to ethene and identification of the putative reductive dehalogenase gene
-
Grostern A., Edwards E.A. Characterization of a Dehalobacter coculture that dechlorinates 1,2-dichloroethane to ethene and identification of the putative reductive dehalogenase gene. Appl. Environ. Microbiol. 2009, 75:2684-2693.
-
(2009)
Appl. Environ. Microbiol.
, vol.75
, pp. 2684-2693
-
-
Grostern, A.1
Edwards, E.A.2
-
51
-
-
63849253144
-
Isolation of novel bacteria within the Chloroflexi capable of reductive dechlorination of 1,2,3-trichloropropane
-
Yan J., et al. Isolation of novel bacteria within the Chloroflexi capable of reductive dechlorination of 1,2,3-trichloropropane. Environ. Microbiol. 2009, 11:833-843.
-
(2009)
Environ. Microbiol.
, vol.11
, pp. 833-843
-
-
Yan, J.1
-
52
-
-
45849087630
-
High throughput gene expression measurement with real time PCR in a microfluidic dynamic array
-
Spurgeon S.L., et al. High throughput gene expression measurement with real time PCR in a microfluidic dynamic array. PLoS ONE 2008, 3:e1662.
-
(2008)
PLoS ONE
, vol.3
-
-
Spurgeon, S.L.1
-
53
-
-
33751005301
-
Nanoliter high throughput quantitative PCR
-
Morrison T., et al. Nanoliter high throughput quantitative PCR. Nucleic Acids Res. 2006, 34:e123.
-
(2006)
Nucleic Acids Res.
, vol.34
-
-
Morrison, T.1
-
54
-
-
77952270702
-
High-throughput nanovolume qPCR: next-generation platform combines microarray throughput with sensitivity
-
Gelfand D., Kastury K. High-throughput nanovolume qPCR: next-generation platform combines microarray throughput with sensitivity. Genet. Eng. Biotechnol. News 2009, 29.
-
(2009)
Genet. Eng. Biotechnol. News
, pp. 29
-
-
Gelfand, D.1
Kastury, K.2
-
55
-
-
34248159046
-
GeoChip: a comprehensive microarray for investigating biogeochemical, ecological and environmental processes
-
He Z.L., et al. GeoChip: a comprehensive microarray for investigating biogeochemical, ecological and environmental processes. ISME J. 2007, 1:67-77.
-
(2007)
ISME J.
, vol.1
, pp. 67-77
-
-
He, Z.L.1
-
56
-
-
44949159958
-
Comparative genomics of Dehalococcoides ethenogenes 195 and an enrichment culture containing unsequenced Dehalococcoides strains
-
West K.A., et al. Comparative genomics of Dehalococcoides ethenogenes 195 and an enrichment culture containing unsequenced Dehalococcoides strains. Appl. Environ. Microbiol. 2008, 74:3533-3540.
-
(2008)
Appl. Environ. Microbiol.
, vol.74
, pp. 3533-3540
-
-
West, K.A.1
-
57
-
-
43049147593
-
Temporal transcriptomic microarray analysis of Dehalococcoides ethenogenes strain 195 during the transition into stationary phase
-
Johnson D.R., et al. Temporal transcriptomic microarray analysis of Dehalococcoides ethenogenes strain 195 during the transition into stationary phase. Appl. Environ. Microbiol. 2008, 74:2864-2872.
-
(2008)
Appl. Environ. Microbiol.
, vol.74
, pp. 2864-2872
-
-
Johnson, D.R.1
-
58
-
-
67749139566
-
Investigation of carbon metabolism in Dehalococcoides ethenogenes strain 195 by use of isotopomer and transcriptomic analyses
-
Tang Y.J.J., et al. Investigation of carbon metabolism in Dehalococcoides ethenogenes strain 195 by use of isotopomer and transcriptomic analyses. J. Bacteriol. 2009, 191:5224-5231.
-
(2009)
J. Bacteriol.
, vol.191
, pp. 5224-5231
-
-
Tang, Y.J.J.1
-
59
-
-
70149123013
-
Isolation and characterization of Dehalococcoides sp. strain MB, which dechlorinates tetrachloroethene to trans-1,2-dichloroethene
-
Cheng D., He J. Isolation and characterization of Dehalococcoides sp. strain MB, which dechlorinates tetrachloroethene to trans-1,2-dichloroethene. Appl. Environ. Microbiol. 2009, 75:5910-5918.
-
(2009)
Appl. Environ. Microbiol.
, vol.75
, pp. 5910-5918
-
-
Cheng, D.1
He, J.2
-
60
-
-
34248165412
-
Metaproteomics: a new approach for studying functional microbial ecology
-
Maron P.A., et al. Metaproteomics: a new approach for studying functional microbial ecology. Microb. Ecol. 2007, 53:486-493.
-
(2007)
Microb. Ecol.
, vol.53
, pp. 486-493
-
-
Maron, P.A.1
-
61
-
-
33746767681
-
Transcription and mass-spectroscopic proteomic studies of electron transport oxidoreductases in Dehalococcoides ethenogenes
-
Morris R.M., et al. Transcription and mass-spectroscopic proteomic studies of electron transport oxidoreductases in Dehalococcoides ethenogenes. Environ. Microbiol. 2006, 8:1499-1509.
-
(2006)
Environ. Microbiol.
, vol.8
, pp. 1499-1509
-
-
Morris, R.M.1
-
62
-
-
33846123326
-
Comparative proteomics of Dehalococcoides spp. reveals strain-specific peptides associated with activity
-
Morris R.M., et al. Comparative proteomics of Dehalococcoides spp. reveals strain-specific peptides associated with activity. Appl. Environ. Microbiol. 2007, 73:320-326.
-
(2007)
Appl. Environ. Microbiol.
, vol.73
, pp. 320-326
-
-
Morris, R.M.1
-
63
-
-
70349686595
-
Absolute quantification of Dehalococcoides proteins: enzyme bioindicators of chlorinated ethene dehalorespiration
-
Werner J.J., et al. Absolute quantification of Dehalococcoides proteins: enzyme bioindicators of chlorinated ethene dehalorespiration. Environ. Microbiol. 2009, 11:2687-2697.
-
(2009)
Environ. Microbiol.
, vol.11
, pp. 2687-2697
-
-
Werner, J.J.1
-
64
-
-
84868230488
-
Environmental biotechnology: a bioremediation perspective
-
Koenigsberg S.S., et al. Environmental biotechnology: a bioremediation perspective. Remediation J. 2005, 15:5-25.
-
(2005)
Remediation J.
, vol.15
, pp. 5-25
-
-
Koenigsberg, S.S.1
-
65
-
-
33750584707
-
Proteomics and metabolomics: the molecular make-up of toxic aromatic pollutant bioremediation
-
Singh O.V. Proteomics and metabolomics: the molecular make-up of toxic aromatic pollutant bioremediation. Proteomics 2006, 6:5481-5492.
-
(2006)
Proteomics
, vol.6
, pp. 5481-5492
-
-
Singh, O.V.1
-
66
-
-
67849133745
-
Analytical strategies in lipidomics and applications in disease biomarker discovery
-
Hu C.X., et al. Analytical strategies in lipidomics and applications in disease biomarker discovery. J. Chromatr. B 2009, 877:2836-2846.
-
(2009)
J. Chromatr. B
, vol.877
, pp. 2836-2846
-
-
Hu, C.X.1
-
67
-
-
63249121217
-
Application of 'next-generation' sequencing technologies to microbial genetics
-
MacLean D., et al. Application of 'next-generation' sequencing technologies to microbial genetics. Nat. Rev. Microbiol. 2009, 7:287-296.
-
(2009)
Nat. Rev. Microbiol.
, vol.7
, pp. 287-296
-
-
MacLean, D.1
-
68
-
-
0025296244
-
Desulfomonile tiedjei gen. nov. and sp. nov., a novel anaerobic, dehalogenating, sulfate-reducing bacterium
-
Deweerd K.A., et al. Desulfomonile tiedjei gen. nov. and sp. nov., a novel anaerobic, dehalogenating, sulfate-reducing bacterium. Arch. Microbiol. 1990, 154:23-30.
-
(1990)
Arch. Microbiol.
, vol.154
, pp. 23-30
-
-
Deweerd, K.A.1
-
69
-
-
33748779279
-
Discrimination of multiple Dehalococcoides strains in a trichloroethene enrichment by quantification of their reductive dehalogenase genes
-
Holmes V.F., et al. Discrimination of multiple Dehalococcoides strains in a trichloroethene enrichment by quantification of their reductive dehalogenase genes. Appl. Environ. Microbiol. 2006, 72:5877-5883.
-
(2006)
Appl. Environ. Microbiol.
, vol.72
, pp. 5877-5883
-
-
Holmes, V.F.1
-
70
-
-
77953122456
-
The little bacteria that can; diversity, genomics and ecophysiology of Dehalococcoides spp. in contaminated environments
-
Taş N., et al. The little bacteria that can; diversity, genomics and ecophysiology of Dehalococcoides spp. in contaminated environments. Microb. Biotechnol. 2009, 9999.
-
(2009)
Microb. Biotechnol.
, pp. 9999
-
-
Taş, N.1
-
71
-
-
64749101213
-
A novel Dehalobacter species is involved in extensive 4,5,6,7-tetrachlorophthalide dechlorination
-
Yoshida N., et al. A novel Dehalobacter species is involved in extensive 4,5,6,7-tetrachlorophthalide dechlorination. Appl. Environ. Microbiol. 2009, 75:2400-2405.
-
(2009)
Appl. Environ. Microbiol.
, vol.75
, pp. 2400-2405
-
-
Yoshida, N.1
-
72
-
-
2542523843
-
ARB: a software environment for sequence data
-
Ludwig W., et al. ARB: a software environment for sequence data. Nucleic Acids Res. 2004, 32:1363-1371.
-
(2004)
Nucleic Acids Res.
, vol.32
, pp. 1363-1371
-
-
Ludwig, W.1
-
73
-
-
33845873289
-
Interactive Tree Of Life (iTOL): an online tool for phylogenetic tree display and annotation
-
Letunic I., Bork P. Interactive Tree Of Life (iTOL): an online tool for phylogenetic tree display and annotation. Bioinformatics 2007, 23:127-128.
-
(2007)
Bioinformatics
, vol.23
, pp. 127-128
-
-
Letunic, I.1
Bork, P.2
|