메뉴 건너뛰기




Volumn 107, Issue 21, 2010, Pages 9608-9613

Inositol 1,3,4,5,6-pentakisphosphate 2-kinase is a distant IPK member with a singular inositide binding site for axial 2-OH recognition

Author keywords

Crystal structure; InsP5 2 kinase; IP5; IP6; Ipk1

Indexed keywords

ADENOSINE TRIPHOSPHATE; INOSITOL 1,3,4,5,6 PENTAKISPHOSPHATE 2 KINASE; INOSITOL PHOSPHATE; PHOSPHOTRANSFERASE; UNCLASSIFIED DRUG; ZINC BINDING PROTEIN;

EID: 77953097386     PISSN: 00278424     EISSN: 10916490     Source Type: Journal    
DOI: 10.1073/pnas.0912979107     Document Type: Article
Times cited : (42)

References (46)
  • 1
    • 38549132277 scopus 로고    scopus 로고
    • Inositol derivatives: Evolution and functions
    • Michell RH (2008) Inositol derivatives: Evolution and functions. Nat Rev Mol Cell Biol 9:151-161.
    • (2008) Nat Rev Mol Cell Biol , vol.9 , pp. 151-161
    • Michell, R.H.1
  • 2
    • 0035347166 scopus 로고    scopus 로고
    • Back in the water: The return of the inositol phosphates
    • Irvine RF, Schell MJ (2001) Back in the water: The return of the inositol phosphates. Nat Rev Mol Cell Biol 2:327-338.
    • (2001) Nat Rev Mol Cell Biol , vol.2 , pp. 327-338
    • Irvine, R.F.1    Schell, M.J.2
  • 3
    • 0033516604 scopus 로고    scopus 로고
    • A phospholipase C-dependent inositol polyphosphate kinase pathway required for efficient messenger RNA export
    • York JD, Odom AR, Murphy R, Ives EB,Wente SR (1999) A phospholipase C-dependent inositol polyphosphate kinase pathway required for efficient messenger RNA export. Science 285:96-100.
    • (1999) Science , vol.285 , pp. 96-100
    • York, J.D.1    Odom, A.R.2    Murphy, R.3    Ives, E.B.4    Wente, S.R.5
  • 4
    • 0034664805 scopus 로고    scopus 로고
    • Binding of inositol phosphate to DNA-PK and stimulation of double-strand break repair
    • Hanakahi LA, Bartlet-Jones M, Chappell C, Pappin D,West SC (2000) Binding of inositol phosphate to DNA-PK and stimulation of double-strand break repair. Cell 102:721-729.
    • (2000) Cell , vol.102 , pp. 721-729
    • Hanakahi, L.A.1    Bartlet-Jones, M.2    Chappell, C.3    Pappin, D.4    West, S.C.5
  • 5
    • 58149240230 scopus 로고    scopus 로고
    • A role for inositol hexakisphosphate in the maintenance of basal resistance to plant pathogens
    • Murphy AM, Otto B, Brearley CA, Carr JP, Hanke DE (2008) A role for inositol hexakisphosphate in the maintenance of basal resistance to plant pathogens. Plant J 56:638-652.
    • (2008) Plant J , vol.56 , pp. 638-652
    • Murphy, A.M.1    Otto, B.2    Brearley, C.A.3    Carr, J.P.4    Hanke, D.E.5
  • 6
    • 67650249238 scopus 로고    scopus 로고
    • Role of inositol polyphosphates in programmed cell death
    • Agarwal R, Mumtaz H, Ali N (2009) Role of inositol polyphosphates in programmed cell death. Mol Cell Biochem 328:155-165.
    • (2009) Mol Cell Biochem , vol.328 , pp. 155-165
    • Agarwal, R.1    Mumtaz, H.2    Ali, N.3
  • 7
    • 0037414839 scopus 로고    scopus 로고
    • Modulation of ATP-dependent chromatin-remodeling complexes by inositol polyphosphates
    • Shen X, Xiao H, Ranallo R, Wu WH, Wu C (2003) Modulation of ATP-dependent chromatin-remodeling complexes by inositol polyphosphates. Science 299:112-114.
    • (2003) Science , vol.299 , pp. 112-114
    • Shen, X.1    Xiao, H.2    Ranallo, R.3    Wu, W.H.4    Wu, C.5
  • 9
    • 0034637548 scopus 로고    scopus 로고
    • The inositol hexakisphosphate kinase family. Catalytic flexibility and function in yeast vacuole biogenesis
    • Saiardi A, Caffrey JJ, Snyder SH, Shears SB (2000) The inositol hexakisphosphate kinase family. Catalytic flexibility and function in yeast vacuole biogenesis. J Biol Chem 275:24686-24692.
    • (2000) J Biol Chem , vol.275 , pp. 24686-24692
    • Saiardi, A.1    Caffrey, J.J.2    Snyder, S.H.3    Shears, S.B.4
  • 10
    • 34147108005 scopus 로고    scopus 로고
    • A conserved family of enzymes that phosphorylate inositol hexakisphosphate
    • Mulugu S, et al. (2007) A conserved family of enzymes that phosphorylate inositol hexakisphosphate. Science 316:106-109.
    • (2007) Science , vol.316 , pp. 106-109
    • Mulugu, S.1
  • 11
    • 66249147273 scopus 로고    scopus 로고
    • Precise genome modification in the crop species Zea mays using zinc-finger nucleases
    • Shukla VK, et al. (2009) Precise genome modification in the crop species Zea mays using zinc-finger nucleases. Nature 459:437-441.
    • (2009) Nature , vol.459 , pp. 437-441
    • Shukla, V.K.1
  • 12
    • 0142026184 scopus 로고    scopus 로고
    • Myo-Inositol-1,2,3,4,5,6-hexakisphosphate
    • Raboy V (2003) myo-Inositol-1,2,3,4,5,6-hexakisphosphate. Phytochemistry 64:1033-1043.
    • (2003) Phytochemistry , vol.64 , pp. 1033-1043
    • Raboy, V.1
  • 13
    • 0035213394 scopus 로고    scopus 로고
    • Seeds for a better future: "Low phytate" grains help to overcome malnutrition and reduce pollution
    • Raboy V (2001) Seeds for a better future: "Low phytate" grains help to overcome malnutrition and reduce pollution. Trends Plant Sci 6:458-462.
    • (2001) Trends Plant Sci , vol.6 , pp. 458-462
    • Raboy, V.1
  • 14
    • 34547786522 scopus 로고    scopus 로고
    • The ABCs of low-phytate crops
    • Raboy V (2007) The ABCs of low-phytate crops. Nat Biotechnol 25:874-875.
    • (2007) Nat Biotechnol , vol.25 , pp. 874-875
    • Raboy, V.1
  • 15
    • 43449110428 scopus 로고    scopus 로고
    • Demonizing phytate
    • Shamsuddin AM (2008) Demonizing phytate. Nat Biotechnol 26:496-497.
    • (2008) Nat Biotechnol , vol.26 , pp. 496-497
    • Shamsuddin, A.M.1
  • 16
    • 33947210819 scopus 로고    scopus 로고
    • Molecular mechanisms for the antitumor activity of inositol hexakisphosphate (IP6)
    • Bozsik A, Kokeny S, Olah E (2007) Molecular mechanisms for the antitumor activity of inositol hexakisphosphate (IP6). Cancer Genomics Proteomics 4:43-52.
    • (2007) Cancer Genomics Proteomics , vol.4 , pp. 43-52
    • Bozsik, A.1    Kokeny, S.2    Olah, E.3
  • 17
    • 0023664866 scopus 로고
    • Phytic acid. A natural antioxidant
    • Graf E, Empson KL, Eaton JW (1987) Phytic acid. A natural antioxidant. J Biol Chem 262:11647-11650.
    • (1987) J Biol Chem , vol.262 , pp. 11647-11650
    • Graf, E.1    Empson, K.L.2    Eaton, J.W.3
  • 18
    • 24944582402 scopus 로고    scopus 로고
    • Inhibition of the phosphatidylinositol 3-kinase/Akt pathway by inositol pentakisphosphate results in antiangiogenic and antitumor effects
    • Maffucci T, et al. (2005) Inhibition of the phosphatidylinositol 3-kinase/Akt pathway by inositol pentakisphosphate results in antiangiogenic and antitumor effects. Cancer Res 65:8339-8349.
    • (2005) Cancer Res , vol.65 , pp. 8339-8349
    • Maffucci, T.1
  • 19
    • 0025762374 scopus 로고
    • Myo-inositol pentakisphosphates. Structure, biological occurrence and phosphorylation to myo-inositol hexakisphosphate
    • Stephens LR, et al. (1991) myo-inositol pentakisphosphates. Structure, biological occurrence and phosphorylation to myo-inositol hexakisphosphate. Biochem J 275:485-499.
    • (1991) Biochem J , vol.275 , pp. 485-499
    • Stephens, L.R.1
  • 20
    • 0028114818 scopus 로고
    • Purification and some properties of inositol 1,3,4,5,6-Pentakisphosphate 2-kinase from immature soybean seeds
    • Phillippy BQ, Ullah AH, Ehrlich KC (1994) Purification and some properties of inositol 1,3,4,5,6-Pentakisphosphate 2-kinase from immature soybean seeds. J Biol Chem 269:28393-28399.
    • (1994) J Biol Chem , vol.269 , pp. 28393-28399
    • Phillippy, B.Q.1    Ullah, A.H.2    Ehrlich, K.C.3
  • 21
    • 32944463612 scopus 로고    scopus 로고
    • Characterization of an Arabidopsis inositol 1,3,4,5,6-pentakisphosphate 2-kinase (AtIPK1)
    • Sweetman D, Johnson S, Caddick SE, Hanke DE, Brearley CA (2006) Characterization of an Arabidopsis inositol 1,3,4,5,6-pentakisphosphate 2-kinase (AtIPK1). Biochem J 394:95-103.
    • (2006) Biochem J , vol.394 , pp. 95-103
    • Sweetman, D.1    Johnson, S.2    Caddick, S.E.3    Hanke, D.E.4    Brearley, C.A.5
  • 22
    • 0037199965 scopus 로고    scopus 로고
    • The synthesis of inositol hexakisphosphate. Characterization of human inositol 1,3,4,5,6-pentakisphosphate 2-kinase
    • Verbsky JW, Wilson MP, Kisseleva MV, Majerus PW, Wente SR (2002) The synthesis of inositol hexakisphosphate. Characterization of human inositol 1,3,4,5,6-pentakisphosphate 2-kinase. J Biol Chem 277:31857-31862.
    • (2002) J Biol Chem , vol.277 , pp. 31857-31862
    • Verbsky, J.W.1    Wilson, M.P.2    Kisseleva, M.V.3    Majerus, P.W.4    Wente, S.R.5
  • 23
    • 0034711248 scopus 로고    scopus 로고
    • Biochemical and functional characterization of inositol 1,3,4,5, 6-pentakisphosphate 2-kinases
    • Ives EB, Nichols J, Wente SR, York JD (2000) Biochemical and functional characterization of inositol 1,3,4,5, 6-pentakisphosphate 2-kinases. J Biol Chem 275:36575-36583.
    • (2000) J Biol Chem , vol.275 , pp. 36575-36583
    • Ives, E.B.1    Nichols, J.2    Wente, S.R.3    York, J.D.4
  • 24
    • 34447130904 scopus 로고    scopus 로고
    • Inositol 1,3,4,5,6-pentakisphosphate 2-kinase from maize: Molecular and biochemical characterization
    • Sun Y, et al. (2007) Inositol 1,3,4,5,6-pentakisphosphate 2-kinase from maize: molecular and biochemical characterization. Plant Physiol 144:1278-1291.
    • (2007) Plant Physiol , vol.144 , pp. 1278-1291
    • Sun, Y.1
  • 25
    • 20844440571 scopus 로고    scopus 로고
    • Disruption of the mouse inositol 1,3,4,5,6-pentakisphosphate 2-kinase gene, associated lethality, and tissue distribution of 2-kinase expression
    • Verbsky J, Lavine K, Majerus PW (2005) Disruption of the mouse inositol 1,3,4,5,6-pentakisphosphate 2-kinase gene, associated lethality, and tissue distribution of 2-kinase expression. Proc Natl Acad Sci USA 102:8448-8453.
    • (2005) Proc Natl Acad Sci USA , vol.102 , pp. 8448-8453
    • Verbsky, J.1    Lavine, K.2    Majerus, P.W.3
  • 26
    • 21344465857 scopus 로고    scopus 로고
    • Inositol polyphosphates regulate zebrafish left-right asymmetry
    • Sarmah B, Latimer AJ, Appel B, Wente SR (2005) Inositol polyphosphates regulate zebrafish left-right asymmetry. Dev Cell 9:133-145.
    • (2005) Dev Cell , vol.9 , pp. 133-145
    • Sarmah, B.1    Latimer, A.J.2    Appel, B.3    Wente, S.R.4
  • 27
    • 4444223742 scopus 로고    scopus 로고
    • Structure of ahumaninositol 1,4,5-trisphosphate 3-kinase: Substrate binding reveals why it is not a phosphoinositide 3-kinase
    • Gonzalez B, et al. (2004) Structure of ahumaninositol 1,4,5-trisphosphate 3-kinase: substrate binding reveals why it is not a phosphoinositide 3-kinase. Mol Cell 15:689-701.
    • (2004) Mol Cell , vol.15 , pp. 689-701
    • Gonzalez, B.1
  • 28
    • 4444230351 scopus 로고    scopus 로고
    • Crystal structure of the catalytic core of inositol 1,4,5-trisphosphate 3-kinase
    • Miller GJ, Hurley JH (2004) Crystal structure of the catalytic core of inositol 1,4,5-trisphosphate 3-kinase. Mol Cell 15:703-711.
    • (2004) Mol Cell , vol.15 , pp. 703-711
    • Miller, G.J.1    Hurley, J.H.2
  • 29
    • 17044363986 scopus 로고    scopus 로고
    • Specificity determinants in inositol polyphosphate synthesis: Crystal structure of inositol 1,3,4-trisphosphate 5/6-kinase
    • Miller GJ, WilsonMP, Majerus PW, Hurley JH (2005) Specificity determinants in inositol polyphosphate synthesis: crystal structure of inositol 1,3,4-trisphosphate 5/6-kinase. Mol Cell 18:201-212.
    • (2005) Mol Cell , vol.18 , pp. 201-212
    • Miller, G.J.1    Wilson, M.P.2    Majerus, P.W.3    Hurley, J.H.4
  • 30
    • 17844401480 scopus 로고    scopus 로고
    • A comprehensive update of the sequence and structure classification of kinases
    • Cheek S, Ginalski K, Zhang H, Grishin NV (2005) A comprehensive update of the sequence and structure classification of kinases. BMC Struct Biol 5:6.
    • (2005) BMC Struct Biol , vol.5 , pp. 6
    • Cheek, S.1    Ginalski, K.2    Zhang, H.3    Grishin, N.V.4
  • 31
    • 24644452029 scopus 로고    scopus 로고
    • Generation of phytate-free seeds in Arabidopsis through disruption of inositol polyphosphate kinases
    • Stevenson-Paulik J, Bastidas RJ, Chiou ST, Frye RA, York JD (2005) Generation of phytate-free seeds in Arabidopsis through disruption of inositol polyphosphate kinases. Proc Natl Acad Sci USA 102:12612-12617.
    • (2005) Proc Natl Acad Sci USA , vol.102 , pp. 12612-12617
    • Stevenson-Paulik, J.1    Bastidas, R.J.2    Chiou, S.T.3    Frye, R.A.4    York, J.D.5
  • 32
    • 4444353636 scopus 로고    scopus 로고
    • Regulation of protein kinases; controlling activity through activation segment conformation
    • Nolen B, Taylor S, Ghosh G (2004) Regulation of protein kinases; controlling activity through activation segment conformation. Mol Cell 15:661-675.
    • (2004) Mol Cell , vol.15 , pp. 661-675
    • Nolen, B.1    Taylor, S.2    Ghosh, G.3
  • 33
    • 39549102614 scopus 로고    scopus 로고
    • HSP90 regulates cell survival via inositol hexakisphosphate kinase-2
    • Chakraborty A, et al. (2008) HSP90 regulates cell survival via inositol hexakisphosphate kinase-2. Proc Natl Acad Sci USA 105:1134-1139.
    • (2008) Proc Natl Acad Sci USA , vol.105 , pp. 1134-1139
    • Chakraborty, A.1
  • 34
    • 0026347883 scopus 로고
    • Determination of the DNA-Binding Sequences of ARGR Proteins to Arginine Anabolic and Catabolic Promoters
    • Messenguy F, Dubois E, Boonchird C (1991) Determination of the DNA-binding sequences of ARGR proteins to arginine anabolic and catabolic promoters. Mol Cell Biol 11:2852-2863. (Pubitemid 21895667)
    • (1991) Molecular and Cellular Biology , vol.11 , Issue.5 , pp. 2852-2863
    • Messenguy, F.1    Dubois, E.2    Boonchird, C.3
  • 35
    • 34247867964 scopus 로고    scopus 로고
    • A lysine accumulation phenotype of ScIpk2Delta mutant yeast is rescued by Solanum tuberosum inositol phosphate multikinase
    • Caddick SE, Harrison CJ, Stavridou I, Johnson S, Brearley CA (2007) A lysine accumulation phenotype of ScIpk2Delta mutant yeast is rescued by Solanum tuberosum inositol phosphate multikinase. Biochem J 403:381-389.
    • (2007) Biochem J , vol.403 , pp. 381-389
    • Caddick, S.E.1    Harrison, C.J.2    Stavridou, I.3    Johnson, S.4    Brearley, C.A.5
  • 36
    • 77953091533 scopus 로고    scopus 로고
    • CSIC PCT Patent Application WO/2009/121994
    • CSIC (2009) PCT Patent Application WO/2009/121994.
    • (2009)
  • 37
    • 75149168324 scopus 로고    scopus 로고
    • Crystallization and preliminary x-ray diffraction analysis of inositol 1,3,4,5,6-pentakisphosphate kinase from Arabidopsis thaliana
    • Baños-Sanz JI, Villate M, Sanz-Aparicio J, Brearley CA, Gonzalez B (2009) Crystallization and preliminary x-ray diffraction analysis of inositol 1,3,4,5,6-pentakisphosphate kinase from Arabidopsis thaliana. Acta Crystallogr F 66:102-106.
    • (2009) Acta Crystallogr F , vol.66 , pp. 102-106
    • Baños-Sanz, J.I.1    Villate, M.2    Sanz-Aparicio, J.3    Brearley, C.A.4    Gonzalez, B.5
  • 39
    • 0028103275 scopus 로고    scopus 로고
    • CCP4 (Collaborative Computational Project Number 4) (1994) the CCP4 suite: Programs for protein crystallography
    • CCP4 (Collaborative Computational Project Number 4) (1994) The CCP4 suite: Programs for protein crystallography. Acta Crystallogr D 50:760-763.
    • Acta Crystallogr D , vol.50 , pp. 760-763
  • 40
    • 37549039510 scopus 로고    scopus 로고
    • A short history of SHELX
    • Sheldrick GM (2008) A short history of SHELX. Acta Crystallogr A 64:112-122.
    • (2008) Acta Crystallogr A , vol.64 , pp. 112-122
    • Sheldrick, G.M.1
  • 42
    • 33748337934 scopus 로고    scopus 로고
    • The Buccaneer software for automated model building. 1. Tracing protein chains
    • Cowtan K (2006) The Buccaneer software for automated model building. 1. Tracing protein chains. Acta Crystallogr D 62:1002-1011.
    • (2006) Acta Crystallogr D , vol.62 , pp. 1002-1011
    • Cowtan, K.1
  • 43
    • 0030924992 scopus 로고    scopus 로고
    • Refinement of macromolecular structures by the maximum-likelihood method
    • Murshudov GN, Vagin AA, Dodson EJ (1997) Refinement of macromolecular structures by the maximum-likelihood method. Acta Crystallogr D 53:240-255.
    • (1997) Acta Crystallogr D , vol.53 , pp. 240-255
    • Murshudov, G.N.1    Vagin, A.A.2    Dodson, E.J.3
  • 44
    • 84889120137 scopus 로고
    • Improved methods for building protein models in electron density maps and the location of errors in these models
    • Jones TA, Zou JY, Cowan SW, Kjeldgaard M (1991) Improved methods for building protein models in electron density maps and the location of errors in these models. Acta Crystallogr A 47:110-119.
    • (1991) Acta Crystallogr A , vol.47 , pp. 110-119
    • Jones, T.A.1    Zou, J.Y.2    Cowan, S.W.3    Kjeldgaard, M.4
  • 45
    • 43549104879 scopus 로고    scopus 로고
    • A Solanum tuberosum inositol phosphate kinase (StITPK1) displaying inositol phosphate-inositol phosphate and inositol phosphate-ADP phosphotransferase activities
    • Caddick SE, et al. (2008) A Solanum tuberosum inositol phosphate kinase (StITPK1) displaying inositol phosphate-inositol phosphate and inositol phosphate-ADP phosphotransferase activities. FEBS Lett 582:1731-1737.
    • (2008) FEBS Lett , vol.582 , pp. 1731-1737
    • Caddick, S.E.1
  • 46
    • 70349284552 scopus 로고    scopus 로고
    • Nucleoside triphosphate mimicry: A sugar triazolyl nucleoside as an ATP-competitive inhibitor of B. anthracispantothenate kinase
    • Rowan AS, et al. (2009) Nucleoside triphosphate mimicry: A sugar triazolyl nucleoside as an ATP-competitive inhibitor of B. anthracispantothenate kinase. Org Biomol Chem 7:4029-4036.
    • (2009) Org Biomol Chem , vol.7 , pp. 4029-4036
    • Rowan, A.S.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.