-
1
-
-
0031021873
-
Glycolysis in bloodstream form Trypanosoma brucei can be understood in terms of the kinetics of the glycolytic enzymes
-
Bakker B.M., Michels P.A.M., Opperdoes F.R., Westerhoff H.V. Glycolysis in bloodstream form Trypanosoma brucei can be understood in terms of the kinetics of the glycolytic enzymes. Journal of Biological Chemistry 1997, 272(6):3207-3215.
-
(1997)
Journal of Biological Chemistry
, vol.272
, Issue.6
, pp. 3207-3215
-
-
Bakker, B.M.1
Michels, P.A.M.2
Opperdoes, F.R.3
Westerhoff, H.V.4
-
2
-
-
0033591259
-
What controls glycolysis in bloodstream form Trypanosoma brucei
-
Bakker B.M., Michels P.A.M., Opperdoes F.R., Westerhoff H.V. What controls glycolysis in bloodstream form Trypanosoma brucei. Journal of Biological Chemistry 1999, 274(21):14551-14559.
-
(1999)
Journal of Biological Chemistry
, vol.274
, Issue.21
, pp. 14551-14559
-
-
Bakker, B.M.1
Michels, P.A.M.2
Opperdoes, F.R.3
Westerhoff, H.V.4
-
3
-
-
15444350252
-
The complete genome sequence of E. coli K-12
-
Blattner F.R., Plunkett G.l., Perna N.T., Burland V., Riley M., Collado-Vides J., Glasner J.D., Rode C.K., Mayhew G.F., Gregor J., Davis N.W., Kirpatrick H.A., Goeden M.A., Rose D.J., Mau B., Shao Y. The complete genome sequence of E. coli K-12. Science 1997, 277(5331):1453-1462.
-
(1997)
Science
, vol.277
, Issue.5331
, pp. 1453-1462
-
-
Blattner, F.R.1
Plunkett, G.2
Perna, N.T.3
Burland, V.4
Riley, M.5
Collado-Vides, J.6
Glasner, J.D.7
Rode, C.K.8
Mayhew, G.F.9
Gregor, J.10
Davis, N.W.11
Kirpatrick, H.A.12
Goeden, M.A.13
Rose, D.J.14
Mau, B.15
Shao, Y.16
-
4
-
-
0036298294
-
Metabolomics: quantification of intracellular metabolite dynamics
-
Buchholz A., Hurlebaus J., Wandrey C., Takors R. Metabolomics: quantification of intracellular metabolite dynamics. Biomolecular Engineering 2002, 19(1):5-15.
-
(2002)
Biomolecular Engineering
, vol.19
, Issue.1
, pp. 5-15
-
-
Buchholz, A.1
Hurlebaus, J.2
Wandrey, C.3
Takors, R.4
-
5
-
-
0035881207
-
Quantification of intracellular metabolites in E. coli K12 using liquid chromatographic-electrospray ionization tandem mass spectrometric techniques
-
Buchholz A., Takors R., Wandrey C. Quantification of intracellular metabolites in E. coli K12 using liquid chromatographic-electrospray ionization tandem mass spectrometric techniques. Analytical Biochemistry 2001, 295(2):129-137.
-
(2001)
Analytical Biochemistry
, vol.295
, Issue.2
, pp. 129-137
-
-
Buchholz, A.1
Takors, R.2
Wandrey, C.3
-
6
-
-
0035367217
-
Control of the threonine-synthesis pathway in Escherichia coli: a theoretical and experimental approach
-
Chassagnole C., Fell D.A., Rais B., Kudla B., Mazat J.P. Control of the threonine-synthesis pathway in Escherichia coli: a theoretical and experimental approach. Biochemical Journal 2001, 356(2):433-444.
-
(2001)
Biochemical Journal
, vol.356
, Issue.2
, pp. 433-444
-
-
Chassagnole, C.1
Fell, D.A.2
Rais, B.3
Kudla, B.4
Mazat, J.P.5
-
7
-
-
0037025146
-
Dynamic modeling of the central carbon metabolism of Escherichia coli
-
Chassagnole C., Noisommit-Rizzi N., Schmid J.W., Mauch K., Reuss M. Dynamic modeling of the central carbon metabolism of Escherichia coli. Biotechnology and Bioengineering 2002, 79(1):53-73.
-
(2002)
Biotechnology and Bioengineering
, vol.79
, Issue.1
, pp. 53-73
-
-
Chassagnole, C.1
Noisommit-Rizzi, N.2
Schmid, J.W.3
Mauch, K.4
Reuss, M.5
-
8
-
-
52949112270
-
Modelling molecular interaction networks with nonlinear ordinary differential equation
-
MIT Press, Cambridge, Z. Szallasi, J. Stelling, V. Periwal (Eds.)
-
Conrad E.D., Tyson J.J. Modelling molecular interaction networks with nonlinear ordinary differential equation. Systems Modelling in Cellular Biology 2006, 97-123. MIT Press, Cambridge. Z. Szallasi, J. Stelling, V. Periwal (Eds.).
-
(2006)
Systems Modelling in Cellular Biology
, pp. 97-123
-
-
Conrad, E.D.1
Tyson, J.J.2
-
10
-
-
33750040836
-
Reduction of a biochemical model with preservation of its basic dynamic properties
-
Dano S., Madsen M.F., Schmidt H., Cedersund G. Reduction of a biochemical model with preservation of its basic dynamic properties. FEBS Journal 2006, 273(21):4862-4877.
-
(2006)
FEBS Journal
, vol.273
, Issue.21
, pp. 4862-4877
-
-
Dano, S.1
Madsen, M.F.2
Schmidt, H.3
Cedersund, G.4
-
11
-
-
21244477594
-
K-Cone analysis: determining all candidate values for kinetic parameters on a network scale
-
Famili I., Mahadevan R., Palsson B.O. k-Cone analysis: determining all candidate values for kinetic parameters on a network scale. Biophysical Journal 2005, 88(3):1616-1625.
-
(2005)
Biophysical Journal
, vol.88
, Issue.3
, pp. 1616-1625
-
-
Famili, I.1
Mahadevan, R.2
Palsson, B.O.3
-
13
-
-
1842405351
-
Effects of spatiotemporal variations on metabolic control: approximate analysis using (log)linear kinetic models
-
Hatzimanikatis V., Bailey J.E. Effects of spatiotemporal variations on metabolic control: approximate analysis using (log)linear kinetic models. Biotechnology and Bioengineering 1997, 54(2):91-104.
-
(1997)
Biotechnology and Bioengineering
, vol.54
, Issue.2
, pp. 91-104
-
-
Hatzimanikatis, V.1
Bailey, J.E.2
-
15
-
-
25144492110
-
Approximative kinetic formats used in metabolic network modeling
-
Heijnen J.J. Approximative kinetic formats used in metabolic network modeling. Biotechnology and Bioengineering 2005, 91(5):534-545.
-
(2005)
Biotechnology and Bioengineering
, vol.91
, Issue.5
, pp. 534-545
-
-
Heijnen, J.J.1
-
17
-
-
84938447945
-
Direct search solution of numerical and statistical problems
-
Hooke R., Jeeves T.A. Direct search solution of numerical and statistical problems. Journal of the ACM (JACM) 1961, 8(2):212-229.
-
(1961)
Journal of the ACM (JACM)
, vol.8
, Issue.2
, pp. 212-229
-
-
Hooke, R.1
Jeeves, T.A.2
-
18
-
-
33845368513
-
COPASI - a complex pathway simulator
-
Hoops S., Sahle S., Gauges R., Lee C., Pahle J., Simus N., Singhhal M., Xu L., Mendes P., Kummer U. COPASI - a complex pathway simulator. Bioinformatics 2006, 22(24):3067-3074.
-
(2006)
Bioinformatics
, vol.22
, Issue.24
, pp. 3067-3074
-
-
Hoops, S.1
Sahle, S.2
Gauges, R.3
Lee, C.4
Pahle, J.5
Simus, N.6
Singhhal, M.7
Xu, L.8
Mendes, P.9
Kummer, U.10
-
20
-
-
33846449498
-
Dynamic simulation of an in vitro multi-enzyme system
-
Ishii N., Suga Y., Hagiya A., Watanabe H., Mori H., Yoshino M., Tomita M. Dynamic simulation of an in vitro multi-enzyme system. FEBS Letters 2007, 581(3):413-420.
-
(2007)
FEBS Letters
, vol.581
, Issue.3
, pp. 413-420
-
-
Ishii, N.1
Suga, Y.2
Hagiya, A.3
Watanabe, H.4
Mori, H.5
Yoshino, M.6
Tomita, M.7
-
21
-
-
0035071155
-
Dynamic simulation of the human red blood cell metabolic network
-
Jamshidi N., Edwards J.S., Fahland T., Church G.M., Palsson B.O. Dynamic simulation of the human red blood cell metabolic network. Bioinformatics 2001, 17(3):286-287.
-
(2001)
Bioinformatics
, vol.17
, Issue.3
, pp. 286-287
-
-
Jamshidi, N.1
Edwards, J.S.2
Fahland, T.3
Church, G.M.4
Palsson, B.O.5
-
22
-
-
0015875325
-
Allosteric kinetics of pyruvate kinase of Saccharomyces carlsbergensis
-
Johannes K.J., Hess B. Allosteric kinetics of pyruvate kinase of Saccharomyces carlsbergensis. Journal of Molecular Biology 1973, 76(2):181-205.
-
(1973)
Journal of Molecular Biology
, vol.76
, Issue.2
, pp. 181-205
-
-
Johannes, K.J.1
Hess, B.2
-
23
-
-
0037252710
-
KDBI: kinetic data of bio-molecular interaction database
-
Ji Z.L., Chen X., Zhen C.J., Yao L.X., Han L.Y., Yeo W.K., Chung P.C., Puy H.S., Tay Y.T., Muhammad A., Chen Y.Z. KDBI: kinetic data of bio-molecular interaction database. Nucleic Acids Research 2003, 31(1):255-257.
-
(2003)
Nucleic Acids Research
, vol.31
, Issue.1
, pp. 255-257
-
-
Ji, Z.L.1
Chen, X.2
Zhen, C.J.3
Yao, L.X.4
Han, L.Y.5
Yeo, W.K.6
Chung, P.C.7
Puy, H.S.8
Tay, Y.T.9
Muhammad, A.10
Chen, Y.Z.11
-
24
-
-
0033964238
-
The EcoCyc and MetaCyc databases
-
Karp P., Riley M., Saier M., Paulsen I.T., Paley S.M., Pellegrini-Toole A. The EcoCyc and MetaCyc databases. Nucleic Acids Research 2000, 28(1):56-59.
-
(2000)
Nucleic Acids Research
, vol.28
, Issue.1
, pp. 56-59
-
-
Karp, P.1
Riley, M.2
Saier, M.3
Paulsen, I.T.4
Paley, S.M.5
Pellegrini-Toole, A.6
-
25
-
-
0018698096
-
Phosphoenolpyruvate carboxylase of Escherichia coli affinity labeling with bromopyruvate
-
Kameshita I., Tokushige M., Izui K., Katsuki H. Phosphoenolpyruvate carboxylase of Escherichia coli affinity labeling with bromopyruvate. Journal of Biochemistry 1979, 86(5):1251-1257.
-
(1979)
Journal of Biochemistry
, vol.86
, Issue.5
, pp. 1251-1257
-
-
Kameshita, I.1
Tokushige, M.2
Izui, K.3
Katsuki, H.4
-
26
-
-
0037079054
-
Computational systems biology
-
Kitano H. Computational systems biology. Nature 2002, 420(6912):206-210.
-
(2002)
Nature
, vol.420
, Issue.6912
, pp. 206-210
-
-
Kitano, H.1
-
27
-
-
33751418323
-
A simplified method for power-law modelling of metabolic pathways from time-course data and steady-state flux profiles
-
Kitayama T., Kinoshita A., Sugimoto M., Nakayama Y., Tomita M. A simplified method for power-law modelling of metabolic pathways from time-course data and steady-state flux profiles. Theoretical Biology and Medical Modelling 2006, 3:24-33.
-
(2006)
Theoretical Biology and Medical Modelling
, vol.3
, pp. 24-33
-
-
Kitayama, T.1
Kinoshita, A.2
Sugimoto, M.3
Nakayama, Y.4
Tomita, M.5
-
28
-
-
34147189103
-
Systems Biology standards - the community speaks
-
Klipp E., Liebermeister W., Helbig A., Kowald A., Schaber J. Systems Biology standards - the community speaks. Nature Biotechnology 2007, 25(4):390-391.
-
(2007)
Nature Biotechnology
, vol.25
, Issue.4
, pp. 390-391
-
-
Klipp, E.1
Liebermeister, W.2
Helbig, A.3
Kowald, A.4
Schaber, J.5
-
29
-
-
0003519552
-
-
Oxford University Press, New York
-
Lauffenburger D.A., Linderman J.L. Receptors: Models for Binding, Trafficking, and Signaling 1993, Oxford University Press, New York.
-
(1993)
Receptors: Models for Binding, Trafficking, and Signaling
-
-
Lauffenburger, D.A.1
Linderman, J.L.2
-
30
-
-
33644877164
-
BioModels database: a free, centralized database of curated, published, quantitative kinetic models of biochemical and cellular systems
-
Le Novere N., Bornstein B., Broicher A., Courtot M., Donizelli M., Dharuri H., Li L., Sauro H., Schilstra M., Shapiro B., Hucka M. BioModels database: a free, centralized database of curated, published, quantitative kinetic models of biochemical and cellular systems. Nucleic Acids Research 2006, 34:D689-D691.
-
(2006)
Nucleic Acids Research
, vol.34
-
-
Le Novere, N.1
Bornstein, B.2
Broicher, A.3
Courtot, M.4
Donizelli, M.5
Dharuri, H.6
Li, L.7
Sauro, H.8
Schilstra, M.9
Shapiro, B.10
Hucka, M.11
-
31
-
-
33846617808
-
Bringing metabolic networks to life: convenience rate law and thermodynamic constraints
-
Liebermeister W., Klipp E. Bringing metabolic networks to life: convenience rate law and thermodynamic constraints. Theoretical Biology and Medical Modelling 2006, 3:41-54.
-
(2006)
Theoretical Biology and Medical Modelling
, vol.3
, pp. 41-54
-
-
Liebermeister, W.1
Klipp, E.2
-
32
-
-
0030571222
-
Pathway analysis, engineering, and physiological considerations for redirecting central metabolism
-
Liao J.C., Hou S.Y., Chao Y.P. Pathway analysis, engineering, and physiological considerations for redirecting central metabolism. Biotechnology and Bioengineering 1996, 52(1):129-140.
-
(1996)
Biotechnology and Bioengineering
, vol.52
, Issue.1
, pp. 129-140
-
-
Liao, J.C.1
Hou, S.Y.2
Chao, Y.P.3
-
33
-
-
0036708443
-
Dynamic flux balance analysis of diauxic growth in Escherichia coli
-
Mahadevan R., Edwards J.S., Doyle F.J. Dynamic flux balance analysis of diauxic growth in Escherichia coli. Biophysical Journal 2002, 83(3):1331-1340.
-
(2002)
Biophysical Journal
, vol.83
, Issue.3
, pp. 1331-1340
-
-
Mahadevan, R.1
Edwards, J.S.2
Doyle, F.J.3
-
34
-
-
0000718866
-
Modelling large biological systems from functional genomic data: parameter estimation
-
MIT Press, Cambridge, MA, H. Kitano (Ed.)
-
Mendes P. Modelling large biological systems from functional genomic data: parameter estimation. Foundations in Systems Biology 2001, 163-186. MIT Press, Cambridge, MA. H. Kitano (Ed.).
-
(2001)
Foundations in Systems Biology
, pp. 163-186
-
-
Mendes, P.1
-
35
-
-
0032406131
-
Non-linear optimization of biochemical pathways: applications to metabolic engineering and parameter estimation
-
Mendes P., Kell D.B. Non-linear optimization of biochemical pathways: applications to metabolic engineering and parameter estimation. Bioinformatics 1998, 14(10):869-883.
-
(1998)
Bioinformatics
, vol.14
, Issue.10
, pp. 869-883
-
-
Mendes, P.1
Kell, D.B.2
-
36
-
-
0242574982
-
Parameter estimation in biochemical pathways: a comparison of global optimization methods
-
Moles C.G., Mendes P., Banga J.R. Parameter estimation in biochemical pathways: a comparison of global optimization methods. Genome Research 2003, 13:2467-2474.
-
(2003)
Genome Research
, vol.13
, pp. 2467-2474
-
-
Moles, C.G.1
Mendes, P.2
Banga, J.R.3
-
38
-
-
33846849309
-
A method for estimation of elasticities in metabolic networks using steady-state and dynamic metabolomics data and lin-log kinetics
-
Nikerel I.E., van Winden W.A., van Gulik W.M., Heijnen J.J. A method for estimation of elasticities in metabolic networks using steady-state and dynamic metabolomics data and lin-log kinetics. BMC Bioinformatics 2006, 7:540-563.
-
(2006)
BMC Bioinformatics
, vol.7
, pp. 540-563
-
-
Nikerel, I.E.1
van Winden, W.A.2
van Gulik, W.M.3
Heijnen, J.J.4
-
39
-
-
0000536084
-
Automatic selection of methods for solving stiff and nonstiff systems of ordinary differential equations
-
Petzold L. Automatic selection of methods for solving stiff and nonstiff systems of ordinary differential equations. SIAM Journal of Scientific and Statistical Computing 1983, 4(1):136-148.
-
(1983)
SIAM Journal of Scientific and Statistical Computing
, vol.4
, Issue.1
, pp. 136-148
-
-
Petzold, L.1
-
40
-
-
0016764585
-
Biosynthesis of bacterial glycogen. Kinetic studies of a glucose-1-phosphate adenylyltransferase (EC 2. 7. 7. 27) from a glycogen-deficient mutant of Escherichia coli B
-
Preiss J., Greenberg E., Sabraw A. Biosynthesis of bacterial glycogen. Kinetic studies of a glucose-1-phosphate adenylyltransferase (EC 2. 7. 7. 27) from a glycogen-deficient mutant of Escherichia coli B. Journal of Biological Chemistry 1975, 250(19):7631-7638.
-
(1975)
Journal of Biological Chemistry
, vol.250
, Issue.19
, pp. 7631-7638
-
-
Preiss, J.1
Greenberg, E.2
Sabraw, A.3
-
41
-
-
33846040629
-
TransportDB: a comprehensive database resource for cytoplasmic membrance transport systems and outer membrane channels
-
Ren Q.C.K., Paulsen I.T. TransportDB: a comprehensive database resource for cytoplasmic membrance transport systems and outer membrane channels. Nucleic Acids Research 2007, 35:D274-D279.
-
(2007)
Nucleic Acids Research
, vol.35
-
-
Ren, Q.C.K.1
Paulsen, I.T.2
-
42
-
-
0023664450
-
Variability of the intracellular Ionic environment of Escherichia coli - Differences between in vitro and in vivo effects of ion concentrations on protein-DNA interactions and gene expression
-
Richey B., Cayley D.S., Mossing M.C., Kolka C., Anderson C.F., Farrar T.C., Record M.T. Variability of the intracellular Ionic environment of Escherichia coli - Differences between in vitro and in vivo effects of ion concentrations on protein-DNA interactions and gene expression. Journal of Biological Chemistry 1987, 262(15):7157-7164.
-
(1987)
Journal of Biological Chemistry
, vol.262
, Issue.15
, pp. 7157-7164
-
-
Richey, B.1
Cayley, D.S.2
Mossing, M.C.3
Kolka, C.4
Anderson, C.F.5
Farrar, T.C.6
Record, M.T.7
-
43
-
-
32044474451
-
A hybrid approach for efficient and robust parameter estimation in biochemical pathways
-
Rodriguez-Fernandez M., Mendes P., Banga J.R. A hybrid approach for efficient and robust parameter estimation in biochemical pathways. BioSystems 2006, 83(2-3):248-265.
-
(2006)
BioSystems
, vol.83
, Issue.2-3
, pp. 248-265
-
-
Rodriguez-Fernandez, M.1
Mendes, P.2
Banga, J.R.3
-
44
-
-
63349104913
-
SABIO-RK: a database for biochemical reaction and their kinetics
-
Rojas I., Golebiewski M., Kania R., Krebs O., Mir S., Weidemann A., Wittig U. SABIO-RK: a database for biochemical reaction and their kinetics. BMC Systems Biology 2007, I:S6.
-
(2007)
BMC Systems Biology
, vol.1
-
-
Rojas, I.1
Golebiewski, M.2
Kania, R.3
Krebs, O.4
Mir, S.5
Weidemann, A.6
Wittig, U.7
-
45
-
-
0014649230
-
Biochemical systems analysis. I. Some mathematical properties of rate law for component enzymatic reactions
-
Savageau M.A. Biochemical systems analysis. I. Some mathematical properties of rate law for component enzymatic reactions. Journal of Theoretical Biology 1969, 25(3):365-369.
-
(1969)
Journal of Theoretical Biology
, vol.25
, Issue.3
, pp. 365-369
-
-
Savageau, M.A.1
-
46
-
-
0014733809
-
Biochemical systems analysis. 3. Dynamic solutions using a power-law approximation
-
Savageau M.A. Biochemical systems analysis. 3. Dynamic solutions using a power-law approximation. Journal of Theoretical Biology 1970, 26(2):215-226.
-
(1970)
Journal of Theoretical Biology
, vol.26
, Issue.2
, pp. 215-226
-
-
Savageau, M.A.1
-
47
-
-
0005123140
-
Power-law approach to model biochemical systems I
-
Savageau M.A., Voit E.O. Power-law approach to model biochemical systems I. Fermentation Technology 1982, 60(3):221-228.
-
(1982)
Fermentation Technology
, vol.60
, Issue.3
, pp. 221-228
-
-
Savageau, M.A.1
Voit, E.O.2
-
48
-
-
0018797992
-
Analysis of the quasi-steady-state approximation for an enzymatic one-substrate reaction
-
Schauer M., Heinrich R. Analysis of the quasi-steady-state approximation for an enzymatic one-substrate reaction. Journal of Theoretical Biology 1979, 79(4):425-442.
-
(1979)
Journal of Theoretical Biology
, vol.79
, Issue.4
, pp. 425-442
-
-
Schauer, M.1
Heinrich, R.2
-
49
-
-
0020804651
-
Quasi-steady-state approximation in the mathematical-modeling of biochemical reaction networks
-
Schauer M., Heinrich R. Quasi-steady-state approximation in the mathematical-modeling of biochemical reaction networks. Mathematical Biosciences 1983, 65(2):155-170.
-
(1983)
Mathematical Biosciences
, vol.65
, Issue.2
, pp. 155-170
-
-
Schauer, M.1
Heinrich, R.2
-
50
-
-
0036081012
-
BRENDA, enzyme data and metabolic information
-
Schomburg I., Chang A., Schomburg D. BRENDA, enzyme data and metabolic information. Nucleic Acids Research 2002, 30(1):47-49.
-
(2002)
Nucleic Acids Research
, vol.30
, Issue.1
, pp. 47-49
-
-
Schomburg, I.1
Chang, A.2
Schomburg, D.3
-
51
-
-
35448974147
-
Something from nothing - bridging the gap between constraint-based and kinetic modelling
-
Smallbone K., Simeonidis E., Broomhead D.S., Kell D.B. Something from nothing - bridging the gap between constraint-based and kinetic modelling. FEBS Journal 2007, 274(21):5576-5585.
-
(2007)
FEBS Journal
, vol.274
, Issue.21
, pp. 5576-5585
-
-
Smallbone, K.1
Simeonidis, E.2
Broomhead, D.S.3
Kell, D.B.4
-
52
-
-
0242569355
-
Quantitative metabolome analysis using capillary electrophoresis mass spectrometry
-
Soga T., Ohashi Y., Ueno Y., Naraoka H., Tomita M., Nishioka T. Quantitative metabolome analysis using capillary electrophoresis mass spectrometry. Journal of Proteome Research 2003, 2(5):488-494.
-
(2003)
Journal of Proteome Research
, vol.2
, Issue.5
, pp. 488-494
-
-
Soga, T.1
Ohashi, Y.2
Ueno, Y.3
Naraoka, H.4
Tomita, M.5
Nishioka, T.6
-
54
-
-
0345863934
-
The CyberCell Database (CCDB): a comprehensive, self-updating, relational database to coordinate and facilitate in silico modeling of Escherichia coli
-
Sundararaj S., Guo A., Habibi-Nazhad B., Rouani M., Stothard P., Ellison M., Wishart D.S. The CyberCell Database (CCDB): a comprehensive, self-updating, relational database to coordinate and facilitate in silico modeling of Escherichia coli. Nucleic Acids Research 2004, 32:D293-D295.
-
(2004)
Nucleic Acids Research
, vol.32
-
-
Sundararaj, S.1
Guo, A.2
Habibi-Nazhad, B.3
Rouani, M.4
Stothard, P.5
Ellison, M.6
Wishart, D.S.7
-
55
-
-
0033857139
-
Can yeast glycolysis be understood in terms of in vitro kinetics of the constituent enzymes? Testing biochemistry
-
Teusink B., Passarge J., Reijenga C.A., Esgalhado E., van der Weijden C.C., Schepper M., Walsh M.C., Bakker B.M., van Dam K., Westerhoff H.V., Snoep J.L. Can yeast glycolysis be understood in terms of in vitro kinetics of the constituent enzymes? Testing biochemistry. European Journal of Biochemistry 2000, 267(17):5313-5329.
-
(2000)
European Journal of Biochemistry
, vol.267
, Issue.17
, pp. 5313-5329
-
-
Teusink, B.1
Passarge, J.2
Reijenga, C.A.3
Esgalhado, E.4
van der Weijden, C.C.5
Schepper, M.6
Walsh, M.C.7
Bakker, B.M.8
van Dam, K.9
Westerhoff, H.V.10
Snoep, J.L.11
-
56
-
-
0343471961
-
In vivo analysis of metabolic dynamics in Saccharomyces cerevisae: I. Experimental observations
-
Theobald U., Mailinger W., Baltes M., Rizzi M., Reuss M. In vivo analysis of metabolic dynamics in Saccharomyces cerevisae: I. Experimental observations. Biotechnology and Bioengineering 1997, 55(2):305-316.
-
(1997)
Biotechnology and Bioengineering
, vol.55
, Issue.2
, pp. 305-316
-
-
Theobald, U.1
Mailinger, W.2
Baltes, M.3
Rizzi, M.4
Reuss, M.5
-
57
-
-
0027380246
-
In vivo analysis of glucose-induced fast changes in yeast adenine-nucleotide pool applying a rapid sampling technique
-
Theobald U., Mailinger W., Reuss M., Rizzi M. In vivo analysis of glucose-induced fast changes in yeast adenine-nucleotide pool applying a rapid sampling technique. Analytical Biochemistry 1993, 214(1):31-37.
-
(1993)
Analytical Biochemistry
, vol.214
, Issue.1
, pp. 31-37
-
-
Theobald, U.1
Mailinger, W.2
Reuss, M.3
Rizzi, M.4
-
58
-
-
0033107539
-
In vivo dynamics of the pentose phosphate pathway in Saccharomyces cerevisae
-
Vaseghi S., Baumeister A., Rizzi M., Reuss M. In vivo dynamics of the pentose phosphate pathway in Saccharomyces cerevisae. Metabolic Engineering 1999, 1(2):128-140.
-
(1999)
Metabolic Engineering
, vol.1
, Issue.2
, pp. 128-140
-
-
Vaseghi, S.1
Baumeister, A.2
Rizzi, M.3
Reuss, M.4
-
59
-
-
42649134526
-
Parameter estimation in S-systems models
-
Vilela M., Chou I.-C., Vinga S., Vasconcelos A.T.R., Voit E., Almeida S.J. Parameter estimation in S-systems models. BMC Systems Biology 2008, 2:35-48.
-
(2008)
BMC Systems Biology
, vol.2
, pp. 35-48
-
-
Vilela, M.1
Chou, I.-C.2
Vinga, S.3
Vasconcelos, A.T.R.4
Voit, E.5
Almeida, S.J.6
-
60
-
-
0036526636
-
The mathematics of metabolic control analysis revisited
-
Visser D., Heijnen J.J. The mathematics of metabolic control analysis revisited. Metabolic Engineering 2002, 4(2):114-123.
-
(2002)
Metabolic Engineering
, vol.4
, Issue.2
, pp. 114-123
-
-
Visser, D.1
Heijnen, J.J.2
-
61
-
-
0141684666
-
Dynamic simulation and metabolic re-design of a branched pathway using lin-log kinetics
-
Visser D., Heijnen J.J. Dynamic simulation and metabolic re-design of a branched pathway using lin-log kinetics. Metabolic Engineering 2003, 5(3):164-176.
-
(2003)
Metabolic Engineering
, vol.5
, Issue.3
, pp. 164-176
-
-
Visser, D.1
Heijnen, J.J.2
-
62
-
-
0037144089
-
Rapid sampling for analysis of in vivo kinetics the BioScope: a system for continuous-pulse experiments
-
Visser D.v.Z.A., Heijnen J.J., Frank J. Rapid sampling for analysis of in vivo kinetics the BioScope: a system for continuous-pulse experiments. Biotechnology and Bioengineering 2002, 79(6):674-681.
-
(2002)
Biotechnology and Bioengineering
, vol.79
, Issue.6
, pp. 674-681
-
-
Visser, D.1
Heijnen, J.J.2
Frank, J.3
-
64
-
-
33746623003
-
Unravelling the regulatory structure of biochemical networks using stimulus response experiments and large-scale model selection
-
Wahl S.A., Haunschild M.D., Oldiges M., Wiechert W. Unravelling the regulatory structure of biochemical networks using stimulus response experiments and large-scale model selection. IEE Proceedings Systems Biology 2006, 153(4):275-285.
-
(2006)
IEE Proceedings Systems Biology
, vol.153
, Issue.4
, pp. 275-285
-
-
Wahl, S.A.1
Haunschild, M.D.2
Oldiges, M.3
Wiechert, W.4
-
65
-
-
33846940743
-
Kinetic modeling using S-systems and lin-log approaches
-
Wang F.S., Ko C.L., Voit E.O. Kinetic modeling using S-systems and lin-log approaches. Biochemical Engineering Journal 2007, 33(3):238-247.
-
(2007)
Biochemical Engineering Journal
, vol.33
, Issue.3
, pp. 238-247
-
-
Wang, F.S.1
Ko, C.L.2
Voit, E.O.3
-
66
-
-
0026662512
-
Systems analysis for the tricarboxylic acid cycle in Dictyostelium discoideum
-
Wright B.E., Butler M., Albe K.R. Systems analysis for the tricarboxylic acid cycle in Dictyostelium discoideum. The Journal of Biological Chemistry 1992, 267(5):3101-3105.
-
(1992)
The Journal of Biological Chemistry
, vol.267
, Issue.5
, pp. 3101-3105
-
-
Wright, B.E.1
Butler, M.2
Albe, K.R.3
-
67
-
-
26844531259
-
Hybrid dynamic/static method for large-scale simulation of metabolism
-
Yugi K., Nakayama Y., Kinoshita A., Tomita M. Hybrid dynamic/static method for large-scale simulation of metabolism. Theoretical Biology and Medical Modelling 2005, 2(1):42-53.
-
(2005)
Theoretical Biology and Medical Modelling
, vol.2
, Issue.1
, pp. 42-53
-
-
Yugi, K.1
Nakayama, Y.2
Kinoshita, A.3
Tomita, M.4
-
68
-
-
51249086247
-
SBML-SAT: a systems biology markup language (SBML) based sensitivity analysis tool
-
Zi Z., Zheng Y., Rundell A.E., Klipp E. SBML-SAT: a systems biology markup language (SBML) based sensitivity analysis tool. BMC Bioinformatics 2008, 9:342-355.
-
(2008)
BMC Bioinformatics
, vol.9
, pp. 342-355
-
-
Zi, Z.1
Zheng, Y.2
Rundell, A.E.3
Klipp, E.4
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