Erratum: Domain interactions and close vicinity of trans reentrant loops in the Na+-citrate transporter citS of Klebsiella pneumoniae (Biochemistry (2010) 49 (4509) DOI: 10.1021/bi100336s);Cross-linking of trans reentrant loops in the Na+-citrate transporter Cits of Klebsiella Pneumoniae

Biochemistry

Volumn 49, Issue 21, 2010, Pages 4509-4515

  Dobrowolski, Adam ^a   Lolkema, Juke S ^a  

^a UNIVERSITY OF GRONINGEN   (Netherlands)

Author keywords

[No Author keywords available]

Indexed keywords

AMINO ACIDS; BACTERIA; COVALENT BONDS; INTERFACES (MATERIALS); PURIFICATION; SULFUR COMPOUNDS; TOPOLOGY;

CITRATE TRANSPORTERS; DISULFIDE CROSS-LINKING; DOMAIN INTERACTIONS; KLEBSIELLA PNEUMONIAE; SINGLE CYSTEINE RESIDUE; TETRAMERIC COMPLEX; TRANSLOCATION PATHWAY; TRANSPORT ACTIVITY;

SODIUM COMPOUNDS;

CARRIER PROTEIN; CITRIC ACID; CITS PROTEIN; CYSTEINE; GLUTARALDEHYDE; NICKEL; POLYHISTIDINE TAG; PROTEIN SUBUNIT; SODIUM ION; TETRAMER; UNCLASSIFIED DRUG;

AMINO ACID SEQUENCE; ARTICLE; CHROMATOGRAPHY; CONTROLLED STUDY; CROSS LINKING; DISULFIDE BOND; ENZYME SUBSTRATE; KLEBSIELLA PNEUMONIAE; MEMBRANE STRUCTURE; MEMBRANE VESICLE; NONHUMAN; PRIORITY JOURNAL; PROTEIN DOMAIN; PROTEIN MOTIF; PROTEIN PROTEIN INTERACTION; PROTEIN PURIFICATION; WILD TYPE;

KLEBSIELLA PNEUMONIAE;

EID: 77952854330     PISSN: 00062960     EISSN: 15204995     Source Type: Journal    
DOI: 10.1021/bi101746j     Document Type: Erratum

References (32)

1. Saier, M. H., Jr. (2000) A functional-phylogenetic classification system for transmembrane solute transporters Microbiol. Mol. Rev. 64, 354-411
2. Sobczak, I. and Lolkema, J. S. (2005) The 2-hydroxycarboxylate transporter family: physiology, structure, and mechanism Microbiol. Mol. Biol. Rev. 69, 665-695
3. Lolkema, J. S. and Slotboom, D. J. (1998) Estimation of structural similarity of membrane proteins by hydropathy profile alignment Mol. Membr. Biol. 15, 33-42
4. Lolkema, J. S. and Slotboom, D. J. (1998) Hydropathy profile alignment. A tool to search for structural homologues of membrane proteins FEMS Microbiol. Rev. 22, 305-322
5. Lolkema, J. S. and Slotboom, D. J. (2003) Classification of 29 families of secondary transport proteins J. Mol. Biol. 327, 901-909
6. Lolkema, J. S. and Slotboom, D. J. (2005) Sequence and hydropathy profile analysis of two classes of secondary transporters Mol. Membr. Biol. 22, 177-189
7. +-leucine transporters Mol. Membr. Biol. 25, 567-570
8. Dobrowolski, A. and Lolkema, J. S. (2009) Functional importance of GGXG sequence motifs in putative reentrant loops of 2HCT and ESS transport proteins Biochemistry 48, 7448-7456
9. +-glutamate transporter GltS Biochemistry 46, 2326-2332
10. ter Horst, R. and Lolkema, J. S. (2009) Rapid screening of membrane topology of secondary transport proteins Biochim. Biophys. Acta 1798, 672-680
11. Prakash, S., Cooper, G., Singhi, S., and Saier, M. H., Jr. (2003) The ion transporter superfamily Biochim. Biophys. Acta 1618, 79-92
12. van Geest, M. and Lolkema, J. S. (2000) Membrane topology of Na(+)/citrate transporter CitS of Klebsiella pneumoniae by insertion mutagenesis Biochim. Biophys. Acta 1466, 328-338
13. +-citrate transporter CitS of Klebsiella pneumoniae J. Biol. Chem. 279, 31113-31120
14. Mo?cicka, K. B., Krupnik, T., Boekema, E. J., and Lolkema, J. S. (2009) Projection structure by single-particle electron microscopy of secondary transport proteins GltT, CitS, and GltS Biochemistry 48, 6618-6623
15. Lolkema, J. S., Sobczak, I., and Slotboom, D. J. (2005) Secondary transporters of the 2HCT family contain two homologous domains with inverted membrane topology and trans re-entrant loops FEBS J. 272, 2334-2344
16. Lolkema, J. S. (2006) Domain structure and pore-loops in the 2-hydroxycarboxylate transporter family J. Mol. Microbiol. Biotechnol. 11, 318-325
17. Fu, D., Libson, A., Miercke, L. J., Weitzman, C., Nollert, P., Krucinski, J., and Stroud, R. M. (2000) Structural determinants of water permeation through aquaporin-1 Science 290, 481-486
18. + antiporter and insight into mechanism of action and regulation by pH Nature 435, 1197-1202
19. Khademi, S., O'Connell, J., III., Remis, J., Robles-Colmenares, Y., Miercke, L. J. W., and Stroud, R. (2004) Mechanism of ammonia transport by Amt/MEP/Rh: structure of AmtB at 1.35' Science 305, 1587-1594
20. ?-dependent neurotransmitter transporters Nature 437, 215-223
21. Lolkema, J. S., Dobrowolski, A., and Slotboom, D. J. (2008) Evolution of antiparallel two-domain membrane proteins: tracing multiple gene duplication events in the DUF606 family J. Mol. Biol. 378, 596-606
22. Yernool, D., Boudker, O., Jin, Y., and Gouaux, E. (2004) Structure of a glutamate transporter homologue from Pyrococcus horikoshii Nature 431, 811-818
23. Bibi, E. and Kaback, H. R. (1990) In vivo expression of the lacY gene in two segments leads to functional lac permease Proc. Natl. Acad. Sci. U.S.A. 87, 4325-4329
24. Sobczak, I. and Lolkema, J. S. (2003) Accessibility of cysteine residues in a cytoplasmic loop of CitS of Klebsiella pneumoniae is controlled by the catalytic state of the transporter Biochemistry 42, 9789-9796
25. Kaback, H. R. (1974) Transport in isolated bacterial membrane vesicles Methods Enzymol. 31, 698-709
26. Konings, W. N., Barnes, E. N., Jr., and Kaback, H. R. (1971) Mechanisms of active transport in isolated membrane vesicles. 2. The coupling of reduced phenazine methosulfate to the concentrative uptake of β-galactosides and amino acids J. Biol. Chem. 246, 5857-5861
27. Kastner, C. N., Prummer, M., Sick, B., Renn, A., Wild, U. P., and Dimroth, P. (2003) The citrate carrier CitS probed by single-molecule fluorescence spectroscopy Biophys. J. 84, 1651-1659
28. +-independent amino acid transporter Science 325, 1010-1014
29. Abramson, J., Smirnova, I., Kasho, V., Verner, G., Kaback, H. R., and Iwata, S. (2003) Structure and mechanism of the lactose permease of Escherichia coli Science 301, 610-615
30. Huang, Y., Lemieux, M. J., Song, J., Auer, M., and Wang, D. N. (2003) Structure and mechanism of the glycerol-3-phosphate transporter from Escherichia coli Science 301, 616-620
31. Wu, J. and Kaback, H. R. (1996) A general method for determining helix packing in membrane proteins in situ: helices I and II are close to helix VII in the lactosepermease of Escherichia coli Proc. Natl. Acad. Sci. U.S.A. 93, 14498-14502
32. van Geest, M. and Lolkema, J. S. (1999) Transmembrane segment (TMS) VIII of the Na(+)/citrate transporter CitS requires downstream TMS IX for insertion in the Escherichia coli membrane J. Biol. Chem. 274, 29705-29711