메뉴 건너뛰기




Volumn 1, Issue 2, 2008, Pages

Rice Genome Research: Current Status and Future Perspectives

Author keywords

[No Author keywords available]

Indexed keywords


EID: 77952854109     PISSN: None     EISSN: 19403372     Source Type: Journal    
DOI: 10.3835/plantgenome2008.09.0008     Document Type: Review
Times cited : (9)

References (71)
  • 1
    • 0035100055 scopus 로고    scopus 로고
    • Screening of the rice viviparous mutants generated by endogenous retrotransposon Tos17 insertion. Tagging of a zeaxanthin epoxidase gene and a novel OsTATC gene
    • Agrawal, G.K., Yamazaki, M., Kobayashi, M., Hirochika, R., Miyao, A., and Hirochika, H. 2001. Screening of the rice viviparous mutants generated by endogenous retrotransposon Tos17 insertion. Tagging of a zeaxanthin epoxidase gene and a novel OsTATC gene. Plant Physiol. 125:1248–1257.10.1104/pp.125.3.1248. http://gateway.isiknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=agrocropsoil&KeyUT=000168179800015&DestLinkType=FullRecord&DestApp=WOS_CPL&UsrCustomerID=523bbf5d2a868de7bbaeea0bc70ec0e4
    • (2001) Plant Physiol. , vol.125 , pp. 1248-1257
    • Agrawal, G.K.1    Yamazaki, M.2    Kobayashi, M.3    Hirochika, R.4    Miyao, A.5    Hirochika, H.6
  • 3
    • 23044455690 scopus 로고    scopus 로고
    • Cytokinin oxidase regulates rice grain production
    • Ashikari, M., Sakakibara, H., Lin, S., Yamamoto, T., Takashi, T., Nishimura, A., Angeles, E.R., Qian, Q., Kitano, H., and Matsuoka, M. 2005. Cytokinin oxidase regulates rice grain production. Science 309:741–745.http://gateway.isiknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=agrocropsoil&KeyUT=000230938200041&DestLinkType=FullRecord&DestApp=WOS_CPL&UsrCustomerID=523bbf5d2a868de7bbaeea0bc70ec0e4
    • (2005) Science , vol.309 , pp. 741-745
    • Ashikari, M.1    Sakakibara, H.2    Lin, S.3    Yamamoto, T.4    Takashi, T.5    Nishimura, A.6    Angeles, E.R.7    Qian, Q.8    Kitano, H.9    Matsuoka, M.10
  • 5
    • 0037225254 scopus 로고    scopus 로고
    • Polyphyletic origin of cultivated rice: Based on the interspersion pattern of SINEs
    • Cheng, C., Motohashi, R., Tsuchimoto, S., Fukuta, Y., Ohtsubo, H., and Ohtsubo, E. 2003. Polyphyletic origin of cultivated rice: Based on the interspersion pattern of SINEs. Mol. Biol. Evol. 20:67–75.10.1093/molbev/msg004. http://gateway.isiknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=agrocropsoil&KeyUT=000180243700010&DestLinkType=FullRecord&DestApp=WOS_CPL&UsrCustomerID=523bbf5d2a868de7bbaeea0bc70ec0e4
    • (2003) Mol. Biol. Evol. , vol.20 , pp. 67-75
    • Cheng, C.1    Motohashi, R.2    Tsuchimoto, S.3    Fukuta, Y.4    Ohtsubo, H.5    Ohtsubo, E.6
  • 6
    • 0038477224 scopus 로고
    • Reflection of Oryza sativa L. classification
    • Cheng, K.S., and Lu, Y.X. 1984. Reflection of Oryza sativa L. classification. Acta Agronomica Sinica 10:271–280.
    • (1984) Acta Agronomica Sinica , vol.10 , pp. 271-280
    • Cheng, K.S.1    Lu, Y.X.2
  • 7
    • 33646560323 scopus 로고    scopus 로고
    • Promoter mutations of an essential gene for pollen development result in disease resistance in rice
    • Chu, Z., Yuan, M., Yao, J., Ge, X., Yuan, B., Xu, C., Li, X., Fu, B., Li, Z., Bennetzen, J.L., Zhang, Q., and Wang, S. 2006. Promoter mutations of an essential gene for pollen development result in disease resistance in rice. Gene Dev. 20:1250–1255.10.1101/gad.1416306
    • (2006) Gene Dev. , vol.20 , pp. 1250-1255
    • Chu, Z.1    Yuan, M.2    Yao, J.3    Ge, X.4    Yuan, B.5    Xu, C.6    Li, X.7    Fu, B.8    Li, Z.9    Bennetzen, J.L.10    Zhang, Q.11    Wang, S.12
  • 8
    • 4644353880 scopus 로고    scopus 로고
    • An SNP resource for rice genetics and breeding based on subspecies Indica and Japonica genome alignments
    • Feltus, F.A., Wan, J., Schulze, S.R., Estill, J.C., Jiang, N., and Paterson, A.H. 2004. An SNP resource for rice genetics and breeding based on subspecies Indica and Japonica genome alignments. Genome Res. 14:1812–1819.10.1101/gr.2479404. http://gateway.isiknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=agrocropsoil&KeyUT=000223675900017&DestLinkType=FullRecord&DestApp=WOS_CPL&UsrCustomerID=523bbf5d2a868de7bbaeea0bc70ec0e4
    • (2004) Genome Res. , vol.14 , pp. 1812-1819
    • Feltus, F.A.1    Wan, J.2    Schulze, S.R.3    Estill, J.C.4    Jiang, N.5    Paterson, A.H.6
  • 10
    • 33747496374 scopus 로고    scopus 로고
    • A variable cluster of ethylene responsive-like factors regulates metabolic and developmental acclimation responses to submergence in rice
    • Fukao, T., Xu, K., Ronald, P., and Bailey-Serres, J. 2006. A variable cluster of ethylene responsive-like factors regulates metabolic and developmental acclimation responses to submergence in rice. Plant Cell 18:2021–2034.10.1105/tpc.106.043000. http://gateway.isiknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=agrocropsoil&KeyUT=000239703000019&DestLinkType=FullRecord&DestApp=WOS_CPL&UsrCustomerID=523bbf5d2a868de7bbaeea0bc70ec0e4
    • (2006) Plant Cell , vol.18 , pp. 2021-2034
    • Fukao, T.1    Xu, K.2    Ronald, P.3    Bailey-Serres, J.4
  • 11
    • 17444386263 scopus 로고    scopus 로고
    • Genetic structure and diversity in Oryza sativa L
    • Garris, A.J., Tai, T.H., Coburn, J., Kresovich, S., and McCouch, S. 2005. Genetic structure and diversity in Oryza sativa L. Genetics 169:1631–1638.10.1534/genetics.104.035642. http://gateway.isiknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=agrocropsoil&KeyUT=000228450800036&DestLinkType=FullRecord&DestApp=WOS_CPL&UsrCustomerID=523bbf5d2a868de7bbaeea0bc70ec0e4
    • (2005) Genetics , vol.169 , pp. 1631-1638
    • Garris, A.J.1    Tai, T.H.2    Coburn, J.3    Kresovich, S.4    McCouch, S.5
  • 12
    • 34250103509 scopus 로고
    • Isozymes and classification of Asian rice varieties
    • Glaszmann, J.C. 1987. Isozymes and classification of Asian rice varieties. Theor. Appl. Genet. 74:21–30.10.1007/BF00290078. http://gateway.isiknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=agrocropsoil&KeyUT=A1987H471500004&DestLinkType=FullRecord&DestApp=WOS_CPL&UsrCustomerID=523bbf5d2a868de7bbaeea0bc70ec0e4
    • (1987) Theor. Appl. Genet. , vol.74 , pp. 21-30
    • Glaszmann, J.C.1
  • 13
    • 0037394626 scopus 로고    scopus 로고
    • Genome-wide intraspecific DNA-sequence variations in rice
    • Han, B., and Xue, Y.B. 2003. Genome-wide intraspecific DNA-sequence variations in rice. Curr. Opin. Plant Biol. 6:134–138.http://gateway.isiknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=agrocropsoil&KeyUT=000182178700007&DestLinkType=FullRecord&DestApp=WOS_CPL&UsrCustomerID=523bbf5d2a868de7bbaeea0bc70ec0e4
    • (2003) Curr. Opin. Plant Biol. , vol.6 , pp. 134-138
    • Han, B.1    Xue, Y.B.2
  • 15
    • 55549123888 scopus 로고    scopus 로고
    • Genome-wide analysis of transposon insertion polymorphisms reveals intra-specific variation in cultivated rice
    • Huang, X., Lu, G., Zhao, Q., Liu, X., and Han, B. 2008. Genome-wide analysis of transposon insertion polymorphisms reveals intra-specific variation in cultivated rice. Plant Physiol. 148:25–40.10.1104/pp.108.121491. http://gateway.isiknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=agrocropsoil&KeyUT=000258947600003&DestLinkType=FullRecord&DestApp=WOS_CPL&UsrCustomerID=523bbf5d2a868de7bbaeea0bc70ec0e4
    • (2008) Plant Physiol. , vol.148 , pp. 25-40
    • Huang, X.1    Lu, G.2    Zhao, Q.3    Liu, X.4    Han, B.5
  • 16
    • 84907150192 scopus 로고    scopus 로고
    • International Rice Genome Sequencing Project. The map-based sequence of the rice genome
    • IRGSP. 2005. International Rice Genome Sequencing Project. The map-based sequence of the rice genome. Nature 436:793–800.10.1038/nature03895
    • (2005) Nature , vol.436 , pp. 793-800
  • 18
    • 33644868552 scopus 로고    scopus 로고
    • Generation of a flanking sequence-tag database for activation-tagging lines in japonica rice
    • Jeong, D.H., An, S., Park, S., Kang, H.G., Park, G.G., Kim, S.R., Sim, J., Kim, Y.O., Kim, M.K., Kim, S.R., Kim, J., Shin, M., Jung, M., and An, G. 2006. Generation of a flanking sequence-tag database for activation-tagging lines in japonica rice. Plant J. 45:123–132.10.1111/j.1365-313X.2005.02610.x. http://gateway.isiknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=agrocropsoil&KeyUT=000234129500010&DestLinkType=FullRecord&DestApp=WOS_CPL&UsrCustomerID=523bbf5d2a868de7bbaeea0bc70ec0e4
    • (2006) Plant J. , vol.45 , pp. 123-132
    • Jeong, D.H.1    An, S.2    Park, S.3    Kang, H.G.4    Park, G.G.5    Kim, S.R.6    Sim, J.7    Kim, Y.O.8    Kim, M.K.9    Kim, S.R.10    Kim, J.11    Shin, M.12    Jung, M.13    An, G.14
  • 19
    • 4944239027 scopus 로고    scopus 로고
    • Pack-MULE transposable elements mediate gene evolution in plants
    • Jiang, N., Bao, Z.R., Zhang, X.Y., Eddy, S.R., and Wessler, S.R. 2004. Pack-MULE transposable elements mediate gene evolution in plants. Nature 431:569–573.10.1038/nature02953. http://gateway.isiknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=agrocropsoil&KeyUT=000224156700047&DestLinkType=FullRecord&DestApp=WOS_CPL&UsrCustomerID=523bbf5d2a868de7bbaeea0bc70ec0e4
    • (2004) Nature , vol.431 , pp. 569-573
    • Jiang, N.1    Bao, Z.R.2    Zhang, X.Y.3    Eddy, S.R.4    Wessler, S.R.5
  • 20
    • 24944497900 scopus 로고    scopus 로고
    • A tiling microarray expression analysis of rice chromosome 4 suggests a chromosome-level regulation of transcription
    • Jiao, Y., Jia, P., Wang, X., Su, N., Yu, S., Zhang, D., Ma, L., Feng, Q., Jin, Z., Li, L., Xue, Y., Cheng, Z., Zhao, H., Han, B., and Deng, X.W. 2005. A tiling microarray expression analysis of rice chromosome 4 suggests a chromosome-level regulation of transcription. Plant Cell 17:1641–1657.10.1105/tpc.105.031575. http://gateway.isiknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=agrocropsoil&KeyUT=000229493900003&DestLinkType=FullRecord&DestApp=WOS_CPL&UsrCustomerID=523bbf5d2a868de7bbaeea0bc70ec0e4
    • (2005) Plant Cell , vol.17 , pp. 1641-1657
    • Jiao, Y.1    Jia, P.2    Wang, X.3    Su, N.4    Yu, S.5    Zhang, D.6    Ma, L.7    Feng, Q.8    Jin, Z.9    Li, L.10    Xue, Y.11    Cheng, Z.12    Zhao, H.13    Han, B.14    Deng, X.W.15
  • 21
    • 33846120020 scopus 로고    scopus 로고
    • CSRDB: A small RNA integrated database and browser resource for cereals
    • Johnson, C., Bowman, L., Adai, A.T., Vance, V., and Sundaresan, V. 2007. CSRDB: A small RNA integrated database and browser resource for cereals. Nucleic Acids Res. 35:D829–D833.10.1093/nar/gkl991. http://gateway.isiknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=agrocropsoil&KeyUT=000243494600161&DestLinkType=FullRecord&DestApp=WOS_CPL&UsrCustomerID=523bbf5d2a868de7bbaeea0bc70ec0e4
    • (2007) Nucleic Acids Res. , vol.35 , pp. D829-D833
    • Johnson, C.1    Bowman, L.2    Adai, A.T.3    Vance, V.4    Sundaresan, V.5
  • 22
    • 1042280956 scopus 로고    scopus 로고
    • Transposable element annotation of the rice genome
    • Juretic, N., Bureau, T.E., and Bruskiewich, R.M. 2004. Transposable element annotation of the rice genome. Bioinformatics 20:155–160.10.1093/bioinformatics/bth019. http://gateway.isiknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=agrocropsoil&KeyUT=000188389700004&DestLinkType=FullRecord&DestApp=WOS_CPL&UsrCustomerID=523bbf5d2a868de7bbaeea0bc70ec0e4
    • (2004) Bioinformatics , vol.20 , pp. 155-160
    • Juretic, N.1    Bureau, T.E.2    Bruskiewich, R.M.3
  • 23
    • 24344459435 scopus 로고    scopus 로고
    • The evolutionary fate of MULE-mediated duplications of host gene fragments in rice
    • Juretic, N., Hoen, D.R., Huynh, M.L., Harrison, P.M., and Bureau, T.E. 2005. The evolutionary fate of MULE-mediated duplications of host gene fragments in rice. Genome Res. 15:1292–1297.10.1101/gr.4064205. http://gateway.isiknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=agrocropsoil&KeyUT=000231720500013&DestLinkType=FullRecord&DestApp=WOS_CPL&UsrCustomerID=523bbf5d2a868de7bbaeea0bc70ec0e4
    • (2005) Genome Res. , vol.15 , pp. 1292-1297
    • Juretic, N.1    Hoen, D.R.2    Huynh, M.L.3    Harrison, P.M.4    Bureau, T.E.5
  • 24
    • 33744830059 scopus 로고    scopus 로고
    • An SNP caused loss of seed shattering during rice domestication
    • Konishi, S., Izawa, T., Lin, S.Y., Ebana, K., Fukuta, Y., Sasaki, T., and Yano, M. 2006. An SNP caused loss of seed shattering during rice domestication. Science 312:1392–1396.10.1126/science.1126410. http://gateway.isiknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=agrocropsoil&KeyUT=000237961600059&DestLinkType=FullRecord&DestApp=WOS_CPL&UsrCustomerID=523bbf5d2a868de7bbaeea0bc70ec0e4
    • (2006) Science , vol.312 , pp. 1392-1396
    • Konishi, S.1    Izawa, T.2    Lin, S.Y.3    Ebana, K.4    Fukuta, Y.5    Sasaki, T.6    Yano, M.7
  • 25
    • 33645469056 scopus 로고    scopus 로고
    • Rice domestication by reducing shattering
    • Li, C., Zhou, A., and Sang, T. 2006. Rice domestication by reducing shattering. Science 311:1936–1939.10.1126/science.1123604. http://gateway.isiknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=agrocropsoil&KeyUT=000236387800048&DestLinkType=FullRecord&DestApp=WOS_CPL&UsrCustomerID=523bbf5d2a868de7bbaeea0bc70ec0e4
    • (2006) Science , vol.311 , pp. 1936-1939
    • Li, C.1    Zhou, A.2    Sang, T.3
  • 26
    • 33646932116 scopus 로고    scopus 로고
    • Tiling microarray analysis of rice chromosome 10 to identify the transcriptome and relate its expression to chromosomal architecture
    • Li, L., Wang, X., Xia, M., Stolc, V., Su, N., Peng, Z., Waraporn, T., Li, S., Wang, J., Wang, X., and Deng, X.W. 2005. Tiling microarray analysis of rice chromosome 10 to identify the transcriptome and relate its expression to chromosomal architecture. Genome Biol. 6:R52.10.1186/gb-2005-6-6-r52
    • (2005) Genome Biol. , vol.6 , pp. R52
    • Li, L.1    Wang, X.2    Xia, M.3    Stolc, V.4    Su, N.5    Peng, Z.6    Waraporn, T.7    Li, S.8    Wang, J.9    Wang, X.10    Deng, X.W.11
  • 28
    • 0242499850 scopus 로고    scopus 로고
    • Control of tillering in rice
    • Li, X.Y., Qian, Q., Fu, Z.M., Wang, Y.H., Xiong, G.S., Zeng, D.L., Wang, X.Q., Liu, X.F., Teng, S., Hiroshi, F., Yuan, M., Luo, D., Han, B., and Li, J.Y. 2003. Control of tillering in rice. Nature 422:618–621.10.1038/nature01518. http://gateway.isiknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=agrocropsoil&KeyUT=000182111400043&DestLinkType=FullRecord&DestApp=WOS_CPL&UsrCustomerID=523bbf5d2a868de7bbaeea0bc70ec0e4
    • (2003) Nature , vol.422 , pp. 618-621
    • Li, X.Y.1    Qian, Q.2    Fu, Z.M.3    Wang, Y.H.4    Xiong, G.S.5    Zeng, D.L.6    Wang, X.Q.7    Liu, X.F.8    Teng, S.9    Hiroshi, F.10    Yuan, M.11    Luo, D.12    Han, B.13    Li, J.Y.14
  • 31
    • 85183020123 scopus 로고    scopus 로고
    • Collection and comparative analysis of 1888 full-length cDNAs from wild rice Oryza rufipogon Griff
    • W1943
    • Lu, T., Yu, S., Fan, D., Mu, J., Shangguan, Y., Wang, Z., Minobe, Y., Lin, Z.X., and Han, B. 2008b. Collection and comparative analysis of 1888 full-length cDNAs from wild rice Oryza rufipogon Griff. W1943. DNA Res.
    • (2008) DNA Res.
    • Lu, T.1    Yu, S.2    Fan, D.3    Mu, J.4    Shangguan, Y.5    Wang, Z.6    Minobe, Y.7    Lin, Z.X.8    Han, B.9
  • 32
    • 4344616881 scopus 로고    scopus 로고
    • Rapid recent growth and divergence of rice nuclear genomes
    • Ma, J.X., and Bennetzen, J.L. 2004. Rapid recent growth and divergence of rice nuclear genomes. Proc. Natl. Acad. Sci. USA 101:12404–12410.10.1073/pnas.0403715101
    • (2004) Proc. Natl. Acad. Sci. USA , vol.101 , pp. 12404-12410
    • Ma, J.X.1    Bennetzen, J.L.2
  • 33
    • 85183040632 scopus 로고    scopus 로고
    • A large-scale collection of phenotypic data describing an insertional mutant population to facilitate functional analysis of rice genes
    • Miyao, A., Iwasaki, Y., Kitano, H., Itoh, J., Maekawa, M., Murata, K., Yatou, O., Nagato, Y., and Hirochika, H. 2007. A large-scale collection of phenotypic data describing an insertional mutant population to facilitate functional analysis of rice genes. Plant Mol. Biol. 54:325–334.
    • (2007) Plant Mol. Biol. , vol.54 , pp. 325-334
    • Miyao, A.1    Iwasaki, Y.2    Kitano, H.3    Itoh, J.4    Maekawa, M.5    Murata, K.6    Yatou, O.7    Nagato, Y.8    Hirochika, H.9
  • 34
    • 41649102715 scopus 로고    scopus 로고
    • Comparative analysis of the small RNA transcriptomes of Pinus contorta and Oryza sativa
    • Morin, R.D., Aksay, G., Dolgosheina, E., Ebhardt, H.A., Magrini, V., Mardis, E.R., Sahinalp, S.C., and Unrau, P.J. 2008. Comparative analysis of the small RNA transcriptomes of Pinus contorta and Oryza sativa. Genome Res. 18:571–584.10.1101/gr.6897308. http://gateway.isiknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=agrocropsoil&KeyUT=000254562400007&DestLinkType=FullRecord&DestApp=WOS_CPL&UsrCustomerID=523bbf5d2a868de7bbaeea0bc70ec0e4
    • (2008) Genome Res. , vol.18 , pp. 571-584
    • Morin, R.D.1    Aksay, G.2    Dolgosheina, E.3    Ebhardt, H.A.4    Magrini, V.5    Mardis, E.R.6    Sahinalp, S.C.7    Unrau, P.J.8
  • 37
    • 33644873222 scopus 로고    scopus 로고
    • The rice annotation project database (RAP-DB): Hub for Oryza sativa ssp. japonica genome information
    • Ohyanagi, H., Tanaka, T., Sakai, H., Shigemoto, Y., Yamaguchi, K., Habara, T., Fujii, Y., Antonio, B.A., Nagamura, Y., Imanishi, T., Ikeo, K., Itoh, T., Gojobori, T., and Sasaki, T. 2006. The rice annotation project database (RAP-DB): Hub for Oryza sativa ssp. japonica genome information. Nucleic Acids Res. 34:D741–D744.10.1093/nar/gkj094. http://gateway.isiknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=agrocropsoil&KeyUT=000239307700155&DestLinkType=FullRecord&DestApp=WOS_CPL&UsrCustomerID=523bbf5d2a868de7bbaeea0bc70ec0e4
    • (2006) Nucleic Acids Res. , vol.34 , pp. D741-D744
    • Ohyanagi, H.1    Tanaka, T.2    Sakai, H.3    Shigemoto, Y.4    Yamaguchi, K.5    Habara, T.6    Fujii, Y.7    Antonio, B.A.8    Nagamura, Y.9    Imanishi, T.10    Ikeo, K.11    Itoh, T.12    Gojobori, T.13    Sasaki, T.14
  • 38
    • 0012383453 scopus 로고    scopus 로고
    • Wild and cultivated rice
    • p., Matsuo, T
    • Oka, H., and Morishima, H. 1997. Wild and cultivated rice. p. 88–111. In Matsuo, T. Science of the rice plant, Vol. 3.
    • (1997) Science of the rice plant , vol.3 , pp. 88-111
    • Oka, H.1    Morishima, H.2
  • 39
    • 0001505842 scopus 로고
    • Rice varieties intermediate between wild and cultivated forms and the origin of the japonica type
    • Oka, H.I., and Chang, W.T. 1962. Rice varieties intermediate between wild and cultivated forms and the origin of the japonica type. Bot. Bull. Acad. Sinica (Taiwan) 3:109–131.
    • (1962) Bot. Bull. Acad. Sinica (Taiwan) , vol.3 , pp. 109-131
    • Oka, H.I.1    Chang, W.T.2
  • 41
    • 28844493457 scopus 로고    scopus 로고
    • Grains of knowledge: Genomics of model cereals
    • Paterson, A.H., Freeling, M., and Sasaki, T. 2005. Grains of knowledge: Genomics of model cereals. Genome Res. 15:1643–1650.10.1101/gr.3725905. http://gateway.isiknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=agrocropsoil&KeyUT=000233921900006&DestLinkType=FullRecord&DestApp=WOS_CPL&UsrCustomerID=523bbf5d2a868de7bbaeea0bc70ec0e4
    • (2005) Genome Res. , vol.15 , pp. 1643-1650
    • Paterson, A.H.1    Freeling, M.2    Sasaki, T.3
  • 44
    • 38549136871 scopus 로고    scopus 로고
    • The Rice Annotation Project Database (RAP-DB): 2008 update
    • Rice Annotation Project. 2008. The Rice Annotation Project Database (RAP-DB): 2008 update. Nucleic Acids Res. 36:D1028–D1033.10.1093/nar/gkm978. http://gateway.isiknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=agrocropsoil&KeyUT=000252545400179&DestLinkType=FullRecord&DestApp=WOS_CPL&UsrCustomerID=523bbf5d2a868de7bbaeea0bc70ec0e4
    • (2008) Nucleic Acids Res. , vol.36 , pp. D1028-D1033
  • 45
    • 0034013059 scopus 로고    scopus 로고
    • International rice genome sequencing project: The effort to completely sequence the rice genome
    • Sasaki, T., and Burr, B. 2000. International rice genome sequencing project: The effort to completely sequence the rice genome. Curr. Opin. Plant Biol. 3:138–141.http://gateway.isiknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=agrocropsoil&KeyUT=000086004800008&DestLinkType=FullRecord&DestApp=WOS_CPL&UsrCustomerID=523bbf5d2a868de7bbaeea0bc70ec0e4
    • (2000) Curr. Opin. Plant Biol. , vol.3 , pp. 138-141
    • Sasaki, T.1    Burr, B.2
  • 48
    • 3843065475 scopus 로고    scopus 로고
    • High throughput T-DNA insertion mutagenesis in rice: A first step towards in silico reverse genetics
    • Sallaud, C., Gay, C., Larmande, P., Bes, M., Piffanelli, P., Piegu, B., Droc, G., Regad, F., Bourgeois, E., Meynard, D., Perin, C., Sabau, X., Ghesquiere, A., Glaszmann, J.C., Delseny, M., and Guiderdoni, E. 2004. High throughput T-DNA insertion mutagenesis in rice: A first step towards in silico reverse genetics. Plant J. 39:450–464.10.1111/j.1365-313X.2004.02145.x. http://gateway.isiknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=agrocropsoil&KeyUT=000222723900015&DestLinkType=FullRecord&DestApp=WOS_CPL&UsrCustomerID=523bbf5d2a868de7bbaeea0bc70ec0e4
    • (2004) Plant J. , vol.39 , pp. 450-464
    • Sallaud, C.1    Gay, C.2    Larmande, P.3    Bes, M.4    Piffanelli, P.5    Piegu, B.6    Droc, G.7    Regad, F.8    Bourgeois, E.9    Meynard, D.10    Perin, C.11    Sabau, X.12    Ghesquiere, A.13    Glaszmann, J.C.14    Delseny, M.15    Guiderdoni, E.16
  • 49
    • 3543034045 scopus 로고    scopus 로고
    • Development of genome-wide DNA polymorphism database for map-based cloning of rice genes
    • Shen, Y.J., Jiang, H., Jin, J.P., Zhang, Z.B., Xi, B., He, Y.Y., Wang, G., Wang, C., Qian, L., Li, X., Yu, Q.B., Liu, H.J., Chen, D.H., Gao, J.H., Huang, H., Shi, T.L., and Yang, Z.N. 2004. Development of genome-wide DNA polymorphism database for map-based cloning of rice genes. Plant Physiol. 135:1198–1205.10.1104/pp.103.038463. http://gateway.isiknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=agrocropsoil&KeyUT=000222692700006&DestLinkType=FullRecord&DestApp=WOS_CPL&UsrCustomerID=523bbf5d2a868de7bbaeea0bc70ec0e4
    • (2004) Plant Physiol. , vol.135 , pp. 1198-1205
    • Shen, Y.J.1    Jiang, H.2    Jin, J.P.3    Zhang, Z.B.4    Xi, B.5    He, Y.Y.6    Wang, G.7    Wang, C.8    Qian, L.9    Li, X.10    Yu, Q.B.11    Liu, H.J.12    Chen, D.H.13    Gao, J.H.14    Huang, H.15    Shi, T.L.16    Yang, Z.N.17
  • 50
    • 0037002267 scopus 로고    scopus 로고
    • Rice as a model for comparative genomics of plants
    • Shimamoto, K., and Kyozuka, J. 2002. Rice as a model for comparative genomics of plants. Annu. Rev. Plant Biol. 53:399–419.10.1146/annurev.arplant.53.092401.134447. http://gateway.isiknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=agrocropsoil&KeyUT=000177183300017&DestLinkType=FullRecord&DestApp=WOS_CPL&UsrCustomerID=523bbf5d2a868de7bbaeea0bc70ec0e4
    • (2002) Annu. Rev. Plant Biol. , vol.53 , pp. 399-419
    • Shimamoto, K.1    Kyozuka, J.2
  • 51
    • 48349120780 scopus 로고    scopus 로고
    • Deletion in a gene associated with grain size increased yields during rice domestication
    • Shomura, A., Izawa, T., Ebana, K., Ebitani, T., and Kanegae, H. 2008. Deletion in a gene associated with grain size increased yields during rice domestication. Nat. Genet. 40:1023–1028.10.1038/ng.169
    • (2008) Nat. Genet. , vol.40 , pp. 1023-1028
    • Shomura, A.1    Izawa, T.2    Ebana, K.3    Ebitani, T.4    Kanegae, H.5
  • 52
    • 34247614065 scopus 로고    scopus 로고
    • A QTL for rice grain width and weight encodes a previously unknown RING-type E3 ubiquitin ligase
    • Song, X.J., Huang, W., Shi, M., Zhu, M.Z., and Lin, H.X. 2007. A QTL for rice grain width and weight encodes a previously unknown RING-type E3 ubiquitin ligase. Nat. Genet. 39:623–630.10.1038/ng2014
    • (2007) Nat. Genet. , vol.39 , pp. 623-630
    • Song, X.J.1    Huang, W.2    Shi, M.3    Zhu, M.Z.4    Lin, H.X.5
  • 53
    • 42149157716 scopus 로고    scopus 로고
    • Identification of novel and candidate miRNAs in rice by high throughput sequencing
    • Sunkar, R., Zhou, X., Zheng, Y., Zhang, W., and Zhu, J.K. 2008. Identification of novel and candidate miRNAs in rice by high throughput sequencing. BMC Plant Biol. 8:25.10.1186/1471-2229-8-25
    • (2008) BMC Plant Biol. , vol.8 , pp. 25
    • Sunkar, R.1    Zhou, X.2    Zheng, Y.3    Zhang, W.4    Zhu, J.K.5
  • 54
    • 2442645495 scopus 로고    scopus 로고
    • A comparison of rice chloroplast genomes
    • Tang, J., Xia, H., Cao, M., Zhan, X., Zeng, W., Hu, S., Tong, W., Wang, J., Wang, J., Yu, J., Yang, H., and Zhu, L. 2004. A comparison of rice chloroplast genomes. Plant Physiol. 135:412–420.10.1104/pp.103.031245. http://gateway.isiknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=agrocropsoil&KeyUT=000221420800042&DestLinkType=FullRecord&DestApp=WOS_CPL&UsrCustomerID=523bbf5d2a868de7bbaeea0bc70ec0e4
    • (2004) Plant Physiol. , vol.135 , pp. 412-420
    • Tang, J.1    Xia, H.2    Cao, M.3    Zhan, X.4    Zeng, W.5    Hu, S.6    Tong, W.7    Wang, J.8    Wang, J.9    Yu, J.10    Yang, H.11    Zhu, L.12
  • 55
    • 0038581538 scopus 로고    scopus 로고
    • In-depth view of structure, activity, and evolution of rice chromosome 10
    • The Rice Chromosome 10 Sequencing Consortium 2003. In-depth view of structure, activity, and evolution of rice chromosome 10. Science 300:1566–1569.10.1126/science.1083523. http://gateway.isiknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=agrocropsoil&KeyUT=000183333100054&DestLinkType=FullRecord&DestApp=WOS_CPL&UsrCustomerID=523bbf5d2a868de7bbaeea0bc70ec0e4
    • (2003) Science , vol.300 , pp. 1566-1569
  • 56
    • 0037624063 scopus 로고    scopus 로고
    • Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice
    • The Rice Full-Length cDNA Consortium 2003. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Science 301:376–379.10.1126/science.1081288. http://gateway.isiknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=agrocropsoil&KeyUT=000184207300047&DestLinkType=FullRecord&DestApp=WOS_CPL&UsrCustomerID=523bbf5d2a868de7bbaeea0bc70ec0e4
    • (2003) Science , vol.301 , pp. 376-379
  • 57
    • 33646850768 scopus 로고    scopus 로고
    • The rice mitochondrial genomes and their variations
    • Tian, X., Zheng, J., Hu, S., and Yu, J. 2006. The rice mitochondrial genomes and their variations. Plant Physiol. 140:401–410.10.1104/pp.105.070060. http://gateway.isiknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=agrocropsoil&KeyUT=000235215000002&DestLinkType=FullRecord&DestApp=WOS_CPL&UsrCustomerID=523bbf5d2a868de7bbaeea0bc70ec0e4
    • (2006) Plant Physiol. , vol.140 , pp. 401-410
    • Tian, X.1    Zheng, J.2    Hu, S.3    Yu, J.4
  • 58
    • 13244264889 scopus 로고    scopus 로고
    • Genomic paleontology provides evidence for two distinct origins of Asian rice (Oryza sativa L.)
    • Vitte, C., Ishii, T., Lamy, F., Brar, D., and Panaud, O. 2004. Genomic paleontology provides evidence for two distinct origins of Asian rice (Oryza sativa L.). Mol. Gen. Genomics 272:504–511.10.1007/s00438-004-1069-6
    • (2004) Mol. Gen. Genomics , vol.272 , pp. 504-511
    • Vitte, C.1    Ishii, T.2    Lamy, F.3    Brar, D.4    Panaud, O.5
  • 59
    • 33646835190 scopus 로고    scopus 로고
    • Cytoplasmic male sterility of rice with Boro II cytoplasm is caused by a cytotoxic peptide and is restored by two related PPR motif genes via distinct modes of mRNA silencing
    • Wang, Z., Zou, Y., Li, X., Zhang, Q., Chen, L., Wu, H., Su, D., Chen, Y., Guo, J., Luo, D., Long, Y., Zhong, Y., and Liu, Y.G. 2006. Cytoplasmic male sterility of rice with Boro II cytoplasm is caused by a cytotoxic peptide and is restored by two related PPR motif genes via distinct modes of mRNA silencing. Plant Cell 18:676–687.10.1105/tpc.105.038240. http://gateway.isiknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=agrocropsoil&KeyUT=000236004900015&DestLinkType=FullRecord&DestApp=WOS_CPL&UsrCustomerID=523bbf5d2a868de7bbaeea0bc70ec0e4
    • (2006) Plant Cell , vol.18 , pp. 676-687
    • Wang, Z.1    Zou, Y.2    Li, X.3    Zhang, Q.4    Chen, L.5    Wu, H.6    Su, D.7    Chen, Y.8    Guo, J.9    Luo, D.10    Long, Y.11    Zhong, Y.12    Liu, Y.G.13
  • 60
    • 12444307483 scopus 로고    scopus 로고
    • Development of enhancer trap lines for functional analysis of the rice genome
    • Wu, C., Li, X.J., Yuan, W.Y., Chen, G.X., Kilian, A., Li, J., Xu, C., Li, X., Zhou, D.X., Wang, S., and Zhang, Q. 2003. Development of enhancer trap lines for functional analysis of the rice genome. Plant J. 35:418–427.10.1046/j.1365-313X.2003.01808.x. http://gateway.isiknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=agrocropsoil&KeyUT=000184467900013&DestLinkType=FullRecord&DestApp=WOS_CPL&UsrCustomerID=523bbf5d2a868de7bbaeea0bc70ec0e4
    • (2003) Plant J. , vol.35 , pp. 418-427
    • Wu, C.1    Li, X.J.2    Yuan, W.Y.3    Chen, G.X.4    Kilian, A.5    Li, J.6    Xu, C.7    Li, X.8    Zhou, D.X.9    Wang, S.10    Zhang, Q.11
  • 62
    • 33747035582 scopus 로고    scopus 로고
    • Sub1A is an ethylene-response-factor-like gene that confers submergence tolerance to rice
    • Xu, K., Xu, X., Fukao, T., Canlas, P., Maghirang-Rodriguez, R., Heuer, S., Ismail, A.M., Bailey-Serres, J., Ronald, P.C., and Mackill, D.J. 2006. Sub1A is an ethylene-response-factor-like gene that confers submergence tolerance to rice. Nature 442:705–708.10.1038/nature04920. http://gateway.isiknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=agrocropsoil&KeyUT=000239630200050&DestLinkType=FullRecord&DestApp=WOS_CPL&UsrCustomerID=523bbf5d2a868de7bbaeea0bc70ec0e4
    • (2006) Nature , vol.442 , pp. 705-708
    • Xu, K.1    Xu, X.2    Fukao, T.3    Canlas, P.4    Maghirang-Rodriguez, R.5    Heuer, S.6    Ismail, A.M.7    Bailey-Serres, J.8    Ronald, P.C.9    Mackill, D.J.10
  • 63
    • 26444446940 scopus 로고    scopus 로고
    • How can we use genomics to improve cereals with rice as a reference genome?
    • Xu, Y., McCouch, S.R., and Zhang, Q. 2005. How can we use genomics to improve cereals with rice as a reference genome? Plant Mol. Biol. 59:7–26.10.1007/s11103-004-4681-2
    • (2005) Plant Mol. Biol. , vol.59 , pp. 7-26
    • Xu, Y.1    McCouch, S.R.2    Zhang, Q.3
  • 64
    • 43749088351 scopus 로고    scopus 로고
    • Natural variation in Ghd7 is an important regulator of heading date and yield potential in rice
    • Xue, W., Xing, Y., Weng, X., Zhao, Y., Tang, W., Wang, L., Zhou, H., Yu, S., Xu, C., Li, X., and Zhang, Q. 2008. Natural variation in Ghd7 is an important regulator of heading date and yield potential in rice. Nat. Genet. 40:761–767.10.1038/ng.143
    • (2008) Nat. Genet. , vol.40 , pp. 761-767
    • Xue, W.1    Xing, Y.2    Weng, X.3    Zhao, Y.4    Tang, W.5    Wang, L.6    Zhou, H.7    Yu, S.8    Xu, C.9    Li, X.10    Zhang, Q.11
  • 67
    • 33847120341 scopus 로고    scopus 로고
    • Non-random distribution of T-DNA insertions at various levels of the genome hierarchy as revealed by analyzing 13 804 T-DNA flanking sequences from an enhancer-trap mutant library
    • Zhang, J., Guo, D., Chang, Y., You, C., Li, X., Dai, X., Weng, Q., Zhang, J., Chen, G., Li, X., Liu, H., Han, B., Zhang, Q., and Wu, C. 2007. Non-random distribution of T-DNA insertions at various levels of the genome hierarchy as revealed by analyzing 13 804 T-DNA flanking sequences from an enhancer-trap mutant library. Plant J. 49:947–959.10.1111/j.1365-313X.2006.03001.x. http://gateway.isiknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=agrocropsoil&KeyUT=000244280300015&DestLinkType=FullRecord&DestApp=WOS_CPL&UsrCustomerID=523bbf5d2a868de7bbaeea0bc70ec0e4
    • (2007) Plant J. , vol.49 , pp. 947-959
    • Zhang, J.1    Guo, D.2    Chang, Y.3    You, C.4    Li, X.5    Dai, X.6    Weng, Q.7    Zhang, J.8    Chen, G.9    Li, X.10    Liu, H.11    Han, B.12    Zhang, Q.13    Wu, C.14
  • 68
    • 36749013576 scopus 로고    scopus 로고
    • Strategies for developing Green Super Rice
    • Zhang, Q. 2007. Strategies for developing Green Super Rice. Proc. Natl. Acad. Sci. USA 104:16402–16409.10.1073/pnas.0708013104
    • (2007) Proc. Natl. Acad. Sci. USA , vol.104 , pp. 16402-16409
    • Zhang, Q.1
  • 69
    • 69249239739 scopus 로고    scopus 로고
    • Rice 2020: A call for an international coordinated effort in rice functional genomics
    • Zhang, Q., Li, J., Xue, Y., Han, B., and Deng, X.W. 2008. Rice 2020: A call for an international coordinated effort in rice functional genomics. Mol. Plant. 1:715–719.10.1093/mp/ssn043. http://gateway.isiknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=agrocropsoil&KeyUT=000259104500001&DestLinkType=FullRecord&DestApp=WOS_CPL&UsrCustomerID=523bbf5d2a868de7bbaeea0bc70ec0e4
    • (2008) Mol. Plant. , vol.1 , pp. 715-719
    • Zhang, Q.1    Li, J.2    Xue, Y.3    Han, B.4    Deng, X.W.5
  • 70
    • 50649110065 scopus 로고    scopus 로고
    • A diverse set of microRNAs and microRNA-like small RNAs in developing rice grains
    • Zhu, Q., Spriggs, A., Matthew, L., Fan, L., Kennedy, G., Gubler, F., and Helliwell, C. 2008. A diverse set of microRNAs and microRNA-like small RNAs in developing rice grains. Genome Res. 18:1456–1465.10.1101/gr.075572.107. http://gateway.isiknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=agrocropsoil&KeyUT=000258756500008&DestLinkType=FullRecord&DestApp=WOS_CPL&UsrCustomerID=523bbf5d2a868de7bbaeea0bc70ec0e4
    • (2008) Genome Res. , vol.18 , pp. 1456-1465
    • Zhu, Q.1    Spriggs, A.2    Matthew, L.3    Fan, L.4    Kennedy, G.5    Gubler, F.6    Helliwell, C.7
  • 71
    • 33847755100 scopus 로고    scopus 로고
    • Improvement of whole-genome annotation of cereals through comparative analyses
    • Zhu, W., and Buell, C.R. 2007. Improvement of whole-genome annotation of cereals through comparative analyses. Genome Res. 17:299–310.10.1101/gr.5881807. http://gateway.isiknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcApp=PARTNER_APP&SrcAuth=agrocropsoil&KeyUT=000244573300006&DestLinkType=FullRecord&DestApp=WOS_CPL&UsrCustomerID=523bbf5d2a868de7bbaeea0bc70ec0e4
    • (2007) Genome Res. , vol.17 , pp. 299-310
    • Zhu, W.1    Buell, C.R.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.