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Volumn 14, Issue 9, 2004, Pages 1812-1819

An SNP resource for rice genetics and breeding based on subspecies Indica and Japonica genome alignments

Author keywords

[No Author keywords available]

Indexed keywords

PLANT DNA;

EID: 4644353880     PISSN: 10889051     EISSN: None     Source Type: Journal    
DOI: 10.1101/gr.2479404     Document Type: Article
Times cited : (266)

References (36)
  • 2
    • 0029507498 scopus 로고
    • Local Indicators of Spatial Association - LISA
    • Anselin, L. 1995. Local Indicators of Spatial Association - LISA. Geograph. Anal. 27: 93-115.
    • (1995) Geograph. Anal. , vol.27 , pp. 93-115
    • Anselin, L.1
  • 3
    • 0036673472 scopus 로고    scopus 로고
    • Automated de novo identification of repeat sequence families in sequenced genomes
    • Bao, Z. and Eddy, S.R. 2002. Automated de novo identification of repeat sequence families in sequenced genomes. Genome Res. 12: 1269-1276.
    • (2002) Genome Res. , vol.12 , pp. 1269-1276
    • Bao, Z.1    Eddy, S.R.2
  • 4
    • 0026529344 scopus 로고
    • Levels of naturally occurring DNA polymorphism correlate with recombination rates in D. melanogaster
    • Begun, D.J. and Aquadro, C.F. 1992. Levels of naturally occurring DNA polymorphism correlate with recombination rates in D. melanogaster. Nature 356: 519-520.
    • (1992) Nature , vol.356 , pp. 519-520
    • Begun, D.J.1    Aquadro, C.F.2
  • 5
    • 0033869323 scopus 로고    scopus 로고
    • Comparative sequence analysis of plant nuclear genomes: Microcolinearity and its many exceptions
    • Bennetzen, J.L. 2000. Comparative sequence analysis of plant nuclear genomes: Microcolinearity and its many exceptions. Plant Cell 12: 1021-1029.
    • (2000) Plant Cell , vol.12 , pp. 1021-1029
    • Bennetzen, J.L.1
  • 6
    • 0037373275 scopus 로고    scopus 로고
    • Discovering genotypes underlying human phenotypes: Past successes for Mendelian disease, future approaches for complex disease
    • Botstein, D. and Risch, N. 2003. Discovering genotypes underlying human phenotypes: Past successes for Mendelian disease, future approaches for complex disease. Nat. Genet. 33 Suppl: 228-237.
    • (2003) Nat. Genet. , vol.33 , Issue.SUPPL. , pp. 228-237
    • Botstein, D.1    Risch, N.2
  • 8
    • 0031955518 scopus 로고    scopus 로고
    • Base-calling of automated sequencer traces using phred. I. Accuracy assessment
    • Ewing, B., Hillier, L., Wendl, M.C., and Green, P. 1998. Base-calling of automated sequencer traces using phred. I. Accuracy assessment. Genome Res. 8: 175-185.
    • (1998) Genome Res. , vol.8 , pp. 175-185
    • Ewing, B.1    Hillier, L.2    Wendl, M.C.3    Green, P.4
  • 11
    • 0242286593 scopus 로고    scopus 로고
    • Population structure and its effect on haplotype diversity and linkage disequilibrium surrounding the xa5 locus of rice (Oryza sativa L.)
    • Garris, A.J., McCouch, S.R., and Kresovich, S. 2003. Population structure and its effect on haplotype diversity and linkage disequilibrium surrounding the xa5 locus of rice (Oryza sativa L.). Genetics 165: 759-769.
    • (2003) Genetics , vol.165 , pp. 759-769
    • Garris, A.J.1    McCouch, S.R.2    Kresovich, S.3
  • 13
    • 0031955116 scopus 로고    scopus 로고
    • Consed: A graphical tool for sequence finishing
    • Gordon, D., Abajian, C., and Green, P. 1998. Consed: A graphical tool for sequence finishing. Genome Res. 8: 195-202.
    • (1998) Genome Res. , vol.8 , pp. 195-202
    • Gordon, D.1    Abajian, C.2    Green, P.3
  • 14
    • 0035099278 scopus 로고    scopus 로고
    • Linkage disequilibrium mapping of the bolting gene in sea beet using AFLP markers
    • Hansen, M., Kraft, T., Ganestam, S., Sall, T., and Nilsson, N.O. 2001. Linkage disequilibrium mapping of the bolting gene in sea beet using AFLP markers. Genet. Res. 77: 61-66.
    • (2001) Genet. Res. , vol.77 , pp. 61-66
    • Hansen, M.1    Kraft, T.2    Ganestam, S.3    Sall, T.4    Nilsson, N.O.5
  • 15
    • 0001388540 scopus 로고
    • Early generation analysis of lengths of heterozygous chromosome segments around a locus held heterozygous with backcrossing or selfing
    • Hansen, W.D. 1959. Early generation analysis of lengths of heterozygous chromosome segments around a locus held heterozygous with backcrossing or selfing. Genetics 44: 833-837.
    • (1959) Genetics , vol.44 , pp. 833-837
    • Hansen, W.D.1
  • 18
    • 0037311038 scopus 로고    scopus 로고
    • 21st century wheat breeding: Plot selection or plate detection?
    • Koebner, R.M. and Summers, R.W. 2003. 21st century wheat breeding: Plot selection or plate detection? Trends Biotechnol. 21: 59-63.
    • (2003) Trends Biotechnol. , vol.21 , pp. 59-63
    • Koebner, R.M.1    Summers, R.W.2
  • 19
    • 0028801304 scopus 로고
    • Rapid purification of fluorescent dye-labeled products in a 96-well format for high-throughput automated DNA sequencing
    • Krakowski, K., Bunville, J., Seto, J., Baskin, D., and Seto, D. 1995. Rapid purification of fluorescent dye-labeled products in a 96-well format for high-throughput automated DNA sequencing. Nucleic Acids Res. 23:4930-4931.
    • (1995) Nucleic Acids Res. , vol.23 , pp. 4930-4931
    • Krakowski, K.1    Bunville, J.2    Seto, J.3    Baskin, D.4    Seto, D.5
  • 21
    • 0000975370 scopus 로고
    • The interpretation of statistical maps
    • Moran, P.A.P. 1948. The interpretation of statistical maps. J. Royal Stat. Soc. 10: 243-251.
    • (1948) J. Royal Stat. Soc. , vol.10 , pp. 243-251
    • Moran, P.A.P.1
  • 22
    • 76549254593 scopus 로고
    • Notes on continuous stochastic phenomena
    • Moran, P.A.P. 1950. Notes on continuous stochastic phenomena. Biometrika 37.
    • (1950) Biometrika , vol.37
    • Moran, P.A.P.1
  • 23
    • 0036928794 scopus 로고    scopus 로고
    • Search for and analysis of single nucleotide polymorphisms (SNPs) in rice (Oryza sativa, Oryza rufipogon) and establishment of SNP markers
    • Nasu, S., Suzuki, J., Ohta, R., Hasegawa, K., Yui, R., Kitazawa, N., Monna, L., and Minobe, Y. 2002. Search for and analysis of single nucleotide polymorphisms (SNPs) in rice (Oryza sativa, Oryza rufipogon) and establishment of SNP markers. DNA Res. 9: 163-171.
    • (2002) DNA Res. , vol.9 , pp. 163-171
    • Nasu, S.1    Suzuki, J.2    Ohta, R.3    Hasegawa, K.4    Yui, R.5    Kitazawa, N.6    Monna, L.7    Minobe, Y.8
  • 24
    • 0038581538 scopus 로고    scopus 로고
    • In-depth view of structure, activity, and evolution of rice chromosome 10
    • Rice Chromosome 10 Sequencing Consortium
    • Rice Chromosome 10 Sequencing Consortium. 2003. In-depth view of structure, activity, and evolution of rice chromosome 10. Science 300: 1566-1569.
    • (2003) Science , vol.300 , pp. 1566-1569
  • 26
    • 0034013059 scopus 로고    scopus 로고
    • International Rice Genome Sequencing Project: The effort to completely sequence the rice genome
    • Sasaki, T. and Burr, B. 2000. International Rice Genome Sequencing Project: The effort to completely sequence the rice genome. Curr. Opin. Plant Biol. 3: 138-141.
    • (2000) Curr. Opin. Plant Biol. , vol.3 , pp. 138-141
    • Sasaki, T.1    Burr, B.2
  • 28
    • 0038817772 scopus 로고    scopus 로고
    • Large-scale identification and analysis of genome-wide single-nucleotide polymorphisms for mapping in Arabidopsis thaliana
    • Schmid, K.J., Sorensen, T.R., Stracke, R., Torjek, O., Altmann, T., Mitchell-Olds, T., and Weisshaar, B. 2003. Large-scale identification and analysis of genome-wide single-nucleotide polymorphisms for mapping in Arabidopsis thaliana. Genome Res. 13: 1250-1257.
    • (2003) Genome Res. , vol.13 , pp. 1250-1257
    • Schmid, K.J.1    Sorensen, T.R.2    Stracke, R.3    Torjek, O.4    Altmann, T.5    Mitchell-Olds, T.6    Weisshaar, B.7
  • 29
    • 0031760997 scopus 로고    scopus 로고
    • DNA polymorphism in lycopersicon and crossing-over per physical length
    • Stephan, W. and Langley, C.H. 1998. DNA polymorphism in lycopersicon and crossing-over per physical length. Genetics 150: 1585-1593.
    • (1998) Genetics , vol.150 , pp. 1585-1593
    • Stephan, W.1    Langley, C.H.2
  • 36
    • 9144231248 scopus 로고    scopus 로고
    • BGI-RIS: An integrated information resource and comparative analysis workbench for rice genomics
    • Database issue:
    • Zhao, W., Wang, J., He, X., Huang, X., Jiao, Y., Dai, M., Wei, S., Fu, J., Chen, Y., Ren, X., et al. 2004. BGI-RIS: An integrated information resource and comparative analysis workbench for rice genomics. Nucleic Acids Res. 32 Database issue: D377-D382.
    • (2004) Nucleic Acids Res. , vol.32
    • Zhao, W.1    Wang, J.2    He, X.3    Huang, X.4    Jiao, Y.5    Dai, M.6    Wei, S.7    Fu, J.8    Chen, Y.9    Ren, X.10


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.