Measurement of oxidatively generated base damage in cellular DNA and urine

Free Radical Biology and Medicine

Volumn 48, Issue 11, 2010, Pages 1457-1459

  Cadet, Jean ^a,b   Poulsen, Henrik ^c,d,e  

^a CEA GRENOBLE   (France)

^b UNIVERSITÉ DE SHERBROOKE   (Canada)

^c Rigshospitalet   (Denmark)

^d BISPEBJERG HOSPITAL   (Denmark)

^e UNIVERSITY OF COPENHAGEN   (Denmark)

Author keywords

[No Author keywords available]

Indexed keywords

2,6 DIAMINO 4 HYDROXY 5 FORMAMIDOPYRIMIDINE; 4,6 DIAMINO 5 FORMAMIDOPYRIMIDINE; 5,6 DIHYDRO 5,6 DIHYDROXYTHYMINE; 8 OXO 7,8 DIHYDRO 2' DEOXYADENOSINE; 8 OXO 7,8 DIHYDROGUANOSINE; CELL DNA; DEOXYADENOSINE DERIVATIVE; DNA BASE; FORMIC ACID; GUANOSINE DERIVATIVE; NUCLEOSIDE; PURINE; PYRIMIDINE; PYRIMIDINE DERIVATIVE; THYMINE DERIVATIVE; UNCLASSIFIED DRUG;

ACCURACY; ANALYTIC METHOD; BLOOD LEVEL; DERIVATIZATION; DNA DAMAGE; DNA EXTRACTION; ELECTROCHEMICAL DETECTION; HIGH PERFORMANCE LIQUID CHROMATOGRAPHY; IMMUNOASSAY; IMMUNODETECTION; MASS FRAGMENTOGRAPHY; MEASUREMENT; NOTE; OXIDATION; PRIORITY JOURNAL; QUANTITATIVE ANALYSIS; SENSITIVITY AND SPECIFICITY; TANDEM MASS SPECTROMETRY; URINE LEVEL;

CHROMATOGRAPHY, HIGH PRESSURE LIQUID; DEOXYGUANOSINE; DNA; DNA DAMAGE; GUANINE; HUMANS; OXIDATION-REDUCTION; TANDEM MASS SPECTROMETRY;

EID: 77952553814     PISSN: 08915849     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.freeradbiomed.2010.03.004     Document Type: Note

References (45)

1. Cadet J., Douki T., Ravanat J.-L. Oxidatively generated damage to the guanine moiety of DNA: Mechanistic aspects and formation in cells. Acc. Chem. Res. 2008, 41:1075-1083.
2. Cooke M.S., Olinski R., Loft S. members of the European Standards Committee on Urinary (DNA) Lesion Analysis (ESCULA). Measurement and meaning of oxidatively modified DNA lesions in urine. Cancer Epidemiol. Biomark. Prev. 2008, 17:3-14.
3. Cadet J., Douki T., Frelon S., Sauvaigo S., Pouget J.-P., Ravanat J.-L. Assessment of oxidative base damage to isolated and cellular DNA by HPLC-MS/MS measurement. Free Radic. Biol. Med. 2002, 33:441-449.
4. Hariharan P.V., Cerutti P.A. Formation and repair of gamma-ray induced thymine damage in Micrococcus radiodurans. J. Mol. Biol. 1972, 66:65-81.
5. Cadet J., Berger M. Radiation-induced degradation of the purine bases within DNA and realted model compounds. Int. J. Radiat. Biol. 1985, 47:127-143.
6. 32P]ATP mediates formation of 8-hydroxy-2′-deoxyguanosine from 2′-deoxyguanosine, a possible problem in the 32P-postlabeling assay. Carcinogenesis 1997, 18:2415-2419.
7. Yin B., Whyatt R.M., Perer F.P., Randall M.C., Cooper T.B., Santella R.M. Determination of 8-hydroxydeoxyguanosine by an immunoaffinity chromatography-monoclonal antibody-based ELISA. Free Radic. Biol. Med. 1995, 18:1023-1032.
8. Dizdaroglu M. Gas chromatography-mass spectrometry of free radical-induced products of pyrimidines and purines in DNA. Methods Enzymol. 1990, 193:842-857.
9. Halliwell B., Dizdaroglu M. The measurement of oxidative damage to DNA by HPLC and GC-MS techniques. Free Radic. Res. Commun. 1992, 16:75-87.
10. Floyd R.A., Watson J.J., Wong P.K., Altmiller D.H., Rickard R.C. Hydroxyl free radical adduct of deoxyguanosine: sensitive detection and mechanism of formation. Free Radic. Res. Commun. 1986, 1:163-172.
11. Kasai H., Nishimura S. Hydroxylation of deoxyguanosine at the C-8 position by ascorbic acid and other reducing agents. Nucleic Acids Res. 1984, 12:2137-2145.
12. Cadet J., Douki T., Ravanat J.-L. Artifacts associated with the measurement of oxidized DNA bases. Environ. Health Perspect. 1997, 105:1034-1039.
13. Jaruga P., Speina E., Gackowski D., Tudek B., Olinski R. Endogenous oxidative DNA base modifications analysed with repair enzymes and GC/MS technique. Nucleic Acids Res. 2000, 28:E16.
14. Douki T., Martini R., Ravanat J.L., Tureski R.J., Cadet J. Measurement of 2, 6-diamino-4-hydroxy-5-formamidopyrimidine and 8-oxo-7, 8-dihydroguanine in isolated DNA exposed to gamma radiation in aqueous solution. Carcinogenesis 1997, 18:2385-2391.
15. Ravanat J.L., Duretz B., Guiller A., Douki T., Cadet J. Isotope dilution high-performance liquid chromatography-electrospray tandem mass spectrometry assay for the measurement of 8-oxo-7, 8-dihydro-2′-deoxyguanosine in biological samples. J. Chromatogr. B 1998, 715:349-356.
16. Frelon S., Douki T., Ravanat J.-L., Pouget J.-P., Tornabene C., Cadet J. High-performance liquid chromatography-tandem mass spectrometry measurement of radiation-induced base damage to isolated and cellular DNA. Chem. Res. Toxicol. 2000, 13:1002-1010.
17. Glintborg B., Weimann A., Kensler T.W., Poulsen H.E. Oltipraz chemoprevention trial in Qidong, People's Republic of China:unaltered oxidative biomarkers. Free Radic. Biol. Med. 2006, 41:1010-1014.
18. Singh R., Teichert F., Verschoyle R.D., Kaur B., Vives M., Sharma R.A., Steward W.P., Gescher A.J., Farmer P.B. Simultaneous determination of 8-oxo-2′-deoxyguanosine and 8-oxo-2′-deoxyadenosine in DNA using online column-switching liquid chromatography/tandem mass spectrometry. Rapid Commun. Mass Spectrom. 2009, 23:151-160.
19. Tuo J., Jaruga P., Rodriguez H., Dizdaroglu M., Bohr V.A. The cockayne syndrome group B gene product is involved in cellular repair of 8-hydroxyadenine in DNA. J. Biol. Chem. 2002, 277:30832-30837.
20. Tuo J., Jaruga P., Rodriguez H., Bohr V.A., Dizdaroglu M. Primary fibroblasts of Cockayne syndrome patients are defective in cellular repair of 8-hydroxyguanine and 8-hydroxyadenine resulting from oxidative stress. FASEB J. 2003, 17:668-674.
21. Hailer M.K., Slade P.G., Martin B.D., Sugden K.D. Nei deficient Escherichia coli are sensitive to chromate and accumulate the oxidized guanine lesion spiroiminodihydantoin. Chem. Res. Toxicol. 2005, 18:1378-1383.
22. D'Errico M., Parlanti E., Teson M., Bernades de Jesus B.M., Degan P., Calcagnile A., Jaruga P., Bjørås M., Crescenzi M., Pedrini A.M., Egly J.-M., Zambruno G., Stefanini M., Dizdaroglu M., Dogliotti E. New functions of XPC in the protection of human skin cells from oxidative damage. EMBO J. 2006, 25:4305-4315.
23. Jiang Y., Hong H., Cao H., Wang Y. In vivo formation and in vitro replication of a guanine-thymine intrastrand cross-link lesion. Biochemistry 2007, 46:12757-12763.
24. Hong H., Cao H., Wang Y. Formation and genotoxicity of a guanine-cytosine intrastrand cross-link lesion in vivo. Nucleic Acids Res. 2007, 35:7118-7127.
25. Collins A.R., Cadet J., Möller L., Poulsen H., Viňa J. Are we sure we know how to measure 8-oxo-7, 8-dihydroguanine in DNA from human cells?. Arch. Biochem. Biophys. 2004, 423:57-65.
26. Gedik C.M., Collins A.R. Establishing the background level of base oxidation in human lymphocyte DNA: results of an inter-laboratory validation study. FASEB J. 2005, 19:82-84. ESCODD.
27. Ravanat J.-L., Douki T., Duez P., Gremaud E., Herbert K., Hofer T., Lassere L., Saint-Pierre C., Favier A., Cadet J. Cellular background of 8-oxo-7, 8-dihydro-2′-deoxyguanosine: an isotope based method to evaluate artefactual oxidation of DNA during its extraction and subsequent work-up. Carcinogenesis 2002, 23:1911-1918.
28. Chao M.R., Yen C.C., Hu C.W. Prevention of artifactual oxidation in determination of cellular 8-oxo-7, 8-dihydro-2′-deoxyguanosine by isotope-dilution LC-MS/MS with automated solid-phase extraction. Free Radic. Biol. Med. 2008, 44:464-473.
29. Badouard C., Ménézo Y., Panteix G., Ravanat J.-L., Douki T., Favier A. Determination of new types of DNA lesions in human sperm. Zygote 2008, 16:9-13.
30. Mangal D., Vudathala D., Park J.-H., Lee S.H., Penning T.M., Blair I.A. Analysis of 7, 8-dihydro-8-oxo-2′-deoxyguanosine in cellular DNA during oxidative stress. Chem. Res. Toxicol. 2009, 22:788-797.
31. Azqueta A., Shaposhnikov S., Collins A.R. DNA oxidation: Investigating it skey role in environmental mutagenesis with the comet assay. Mutat. Res. 2009, 674:101-108.
32. Pflaum M., Will O., Epe B. Determination of steady-state levels of oxidative DNA base modifications in mammalian cells by means of repair endonucleases. Carcinogenesis 1997, 18:2225-2231.
33. Cooke M.S., Olinski R., Loft S. Members of the European Standards Committee on Urinary(DNA) Lesion Analysis (ESCULA). Measurement and meaning of oxidatively modified DNA lesions in urine. Cancer Epidemiol. Biomark. Prev. 2008, 17:3-14.
34. Garratt L.W., Mistry V., Singh R., Sandhu J., Sheil B., Cooke M.S., Sly P.D. Interpretation of urinary 8-oxo-7, 8-dihydro-2′-deoxyguanosine is adversely affected by methodological inaccuracies when using a commercial ELISA. Free Radic. Biol. Chem. 2010, 48:1460-1464.
35. Toyokuni S., Tanaka T., Hattori Y., Nishiyama Y., Yoshida A., Uchida K., Hiai H., Ochi H., Osawa T. Quantitative immunohistochemical determination of 8-hydroxy-2′-deoxyguanosine by a monoclonal antibody N45.1: its application to ferric nitrilotriacetate-induced renal carcinogenesis model. Lab. Invest. 1997, 76:365-374.
36. Song M.-F., Li Y.-S., Ootsuyama Y., Kasai H., Kawai K., Ohta M., Eguchi Y., Yamato M., Matsumoto Y., Yoshida R., Ogawa Y. Urea, the most abundant component in urine, cross-reacts with a commercial 8-OHdG ELISA kit and contributes to over-estimation of urinary 8-OHdG. Free Radic. Biol. Med. 2009, 47:41-46.
37. Cooke M. A commentary on "Urea, the most abundant component in urine, cross-reacts with a commercial 8-OHdG ELISA kit and contributes to overestimation of urinary 8-OHdG". What is ELISA detecting?. Free Radic. Biol. Med. 2009, 47:30-31.
38. Weimann A., Belling D., Poulsen H.E. Measurement of 8-oxo-2′-deoxyguanosine and 8-oxo-2′-deoxyadenosine in DNA and human urine by high performance liquid chromatography electrospray tandem mass spectrometry. Free Radic. Biol. Med. 2001, 30:757-764.
39. Weimann A., Belling D., Poulsen H.E. Quantification of 8-oxo-guanine and guanine at the nucleobase, nucleoside and deoxynucleoside forms in human urine by high-performance liquid chromatography-electrospray tandem mass spectrometry. Nucleic Acids Res. 2002, 30(EZ).
40. Sabatini L., Barbieri A., Tosi M., Roda A., Violante F.S. A method for routine quantitation of urinary 8-hydroxy-2′-deoxyguanosine based on solid-phase extraction and micro-high-performance liquid chromatography/electrospray ionization tandem mass spectrometry. Rapid Commun. Mass Spectrom. 2005, 19:147-152.
41. Hu C.W., Wang C.J., Chang L.W., Chao M.R. Clinical-scale high throughput analysis of urinary 8-oxo-7, 8-dihydro-2′-deoxyguanosine by isotope-dilution liquid chromatography-tandem mass spectrometry with on-line solid-phase extraction. Clin. Chem. 2006, 52:1381-1388.
42. Malayappan B., Garrett T.J., Segal M., Leeuwenburgh C. Urinary analysis of 8-oxoguanine, 8-oxoguanosine, fapyguanine and 8-oxo-2′-deoxyguanosine by high-performance liquid chromatography-electrospray tandem mass spectrometry as a measure of oxidative stress. J. Chromatogr. A 2007, 1167:54-62.
43. Harri M., Kasai H., Mori T., Tornaeus J., Savela K., Peltonen K. Analysis of 8-hydroxy-2′-deoxyguanosine in urine using high performance liquid chromatography-electrospray tandem mass spectrometry. J. Chromatogr. B 2007, 853:242-246.
44. Evans M.D., Singh R., Mistry V., Sandhu K., Farmer P.B., Cooke M.S. Analysis of urinary 8-oxo-7, 8-dihydro-purine -2′-deoxytibonucleosides by LC-MS/MS and improved ELISA. Free Radic. Res. 2008, 42:831-840.
45. Crow B., Bishop M., Kovalcik K., Norton D., George J., Bralley J.A. A simple and cost effective method for the quantification of 8-hydroxy-2′-deoxyguanosine from urine using liquid chromatography tandem mass spectrometry. Biomed. Chromatogr. 2008, 22:394-401.