Geographical spread of highly pathogenic avian influenza virus H5N1 during the 2006 outbreak in Austria

Journal of Virology

Volumn 84, Issue 11, 2010, Pages 5815-5823

  Fink, Maria ^a   Fernández, Sandra Revilla ^a   Schobesberger, Hermann ^a   Koefer, Josef ^a  

^a AUSTRIAN AGENCY FOR HEALTH AND FOOD SAFETY   (Austria)

Author keywords

[No Author keywords available]

Indexed keywords

VIRUS HEMAGGLUTININ;

AMINO ACID SEQUENCE; ARTICLE; AUSTRIA; BIRD; CLUSTER ANALYSIS; EGYPT; GENE AMPLIFICATION; GEOGRAPHICAL VARIATION (SPECIES); INFLUENZA VIRUS A H5N1; NIGERIA; NONHUMAN; NUCLEOTIDE SEQUENCE; PANDEMIC; PHYLOGENY; PRIORITY JOURNAL; REVERSE TRANSCRIPTION POLYMERASE CHAIN REACTION; SLOVENIA; TURKEY (BIRD); VIRUS ISOLATION; VIRUS MORPHOLOGY;

ANIMALS; AUSTRIA; BIRDS; DISEASE OUTBREAKS; GENES, VIRAL; HEMAGGLUTININS; INFLUENZA A VIRUS, H5N1 SUBTYPE; INFLUENZA IN BIRDS; NEURAMINIDASE; PHYLOGENY; TOPOGRAPHY, MEDICAL;

AVES; AVIAN INFLUENZA VIRUS; CYGNUS OLOR;

EID: 77951996057     PISSN: 0022538X     EISSN: None     Source Type: Journal    
DOI: 10.1128/JVI.01642-09     Document Type: Article

References (25)

1. Bragstad, K., P. H. Jorgensen, K. Handberg, A. S. Hammer, S. Kabell, and A. Fomsgaard. 2007. First introduction of highly pathogenic H5N1 avian influenza viruses in wild and domestic birds in Denmark, northern Europe. Virol. J. 4:43. (Pubitemid 46817313)
2. Chen, H., G. J. D. Smith, K. Li, J. Wang, X. H. Fan, J. M. Rayner, D. Vijaykrishna, J. X. Zhang, L. J. Zhang, C. T. Guo, C. L. Cheung, K. M. Xu, L. Duan, K. Huang, K. Qin, Y.-H. C. Leung, W. L. Wu, H. R. Lu, Y. Chen, N. S. Xia, T. S. P. Naipospos, K. Y. Yuen, S. S. Hassan, S. Bahri, T. D. Nguyen, R. G. Webster, J. S. M. Peiris, and Y. Guan. 2006. Establishment of multiple sublineages of H5N1 influenza virus in Asia: implications for pandemic control. Proc. Natl. Acad Sci. USA 103:2845-2850.
3. Chiaponni, C., F. Fallacara, and E. Fone. 2004. Subtyping of H1N1, H1N2 and H3N2 swine influenza viruses by two multiplex RT-PCR, p. 257. In P. Martelli, S. Cavirani, and A. Lavazza (ed), Proc. 4th Int. Symp. Emerg. Pig Dis. University of Parma, Parma, Italy.
4. Ducatez, M. F., C. M. Olinger, A. A. Owoade, Z. Tarnagda, M. C. Tahita, A. Sow, S. Landtsheer, W. Ammerlaan, J. B. Ouedraogo, A. D. M. E. Osterhaus, R. A. M. Fouchier, and C. P. Muller. 2007. Molecular and antigenic evolution and geographical spread of H5N1 highly pathogenic avian influenza viruses in western Africa. J. Gen. Virol. 88:2297-2306.
5. European Commission. 2006. Draft of the diagnostic manual establishing diagnostic procedures, sampling methods and criteria for evaluation of the laboratory tests for the confirmation of avian influenza, p. 12-30. European Commission SANCO 10212/2006. European Commission, Brussels, Belgium.
6. Glutz von Blotzheim, U. N. 1990. Anseriformes, p. 24-46. In U. N. Glutz von Blotzheim (ed.), Handbuch der vögel mitteleuropas, 2nd ed., vol. 2. AULA-Verlag, Wiesbaden, Germany.
7. Glutz von Blotzheim, U. N. 1990. Anseriformes, p. 31. In U. N. Glutz von Blotzheim (ed.), Handbuch der vögel mitteleuropas, 2nd ed., vol. 2. AULA-Verlag, Wiesbaden, Germany.
8. Glutz von Blotzheim, U. N. 1990. Anseriformes, p. 394. In U. N. Glutz von Blotzheim (ed.), Handbuch der vögel mitteleuropas, 2nd ed., vol. 2. AULA-Verlag, Wiesbaden, Germany.
9. Hall, T. 1999. BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98, NT. Nucleic Acids Symp. Ser. 41:95-98.
10. Huelsenbeck, J. P., and F. Ronguist. 2001. MRBAYES: Bayesian inferences of phylogenetic tree. Bioinformatics 8:654-655.
11. Kiss, I., P. Gyarmatid, S. Zohari, K. W. Ramsay, G. Metreveli, E. Weiss, M. Brytting, M. Stivers, S. Lindström, A. Lundkvist, K. Nemirov, P. Thorén, M. Berg, G. Czifra, and S. Belák. 2008. Molecular characterization of highly pathogenic H5N1 avian influenza viruses isolated in Sweden in 2006. Virol. J. 5:113.
12. Leschnik, M., J. Weikel, K. Möstl, S. Revilla-Fernández, E. Wodak, Z. Bagó, E. Vanek, V. Benetka, M. Hess, and J. G. Thalhammer. 2007. Subclinical infection with avian influenza A (H5N1) virus in cats. Emerg. Infect. Dis. 13(2):243-247.
13. Li, K. S., Y. Guan, J. Wang, G. J. Smith, K. M. Xu, et al. 2004. Genesis of a highly pathogenic and potentially pandemic H5N1 influenza virus in eastern Asia. Nature 430:209-212.
14. Olsen, B., V. J. Munster, A. Wallensten, J. Waldenström, A. D. Osterhaus, and R. A. Fouchier. 2006. Global patterns of influenza A virus in wild birds. Science 312:382-388.
15. Rinder, M., V. Lang, C. Fuchs, A. Marx-Hafner, K. H. Bogner, A. Neubauer, M. Büttner, and H. Rinder. 2007. Genetic evidence for multi-event imports of avian influenza virus A (H5N1) into Bavaria, Germany. J. Vet. Diagn. Investig. 19:279-282.
16. Salzberg, S. L., C. Kingsford, G. Catoli, D. J. Spio, D. A. Janies, M. M. Aly, I. H. Brown, E. Couacy-Hymann, G. M. De Mia, H. Dung Do, A. Guercio, T. Joannis, A. S. Maken Ali, A. Osmani, I. Padalino, M. D. Saad, V. Saviae, N. A. Sengamalay, S. Yingst, J. Zaborsky, O. Zorman-Rojs, E. Ghedin, and I. Capua. 2007. Genome analysis linking recent European and African influenza (H5N1) viruses. Emerg. Infect. Dis. 13:713-718.
17. Senne, D. A., J. C. Pederson, D. I. Suarez, and B. Panigrahy. 2006. Rapid diagnosis of avian influenza (AI) and assessment of pathogenicity of avian H5 and H7 subtypes by molecular methods. Dev. Biol. 126:171-177.
18. Smith, G. J. D., X. H. Fan, J. Wang, K. S. Li, K. Qin, et al. 2006. Emergence and predominance of a H5N1 influenza variant in China. Proc. Natl. Acad. Sci. USA 103:16936-16941.
19. Spackman, E., D. A. Senne, T. J. Myers, L. L. Bulaga, L. P. Garber, M. L. Perdue, K. Lohmann, L. T. Daum, and D. LO. Suarez. 2002. Development of a real-time reverse transcriptase PCR assay for type A influenza virus and the avian H5H7 hemagglutinin subtypes. J. Clin. Microbiol. 40(9):3256-3260.
20. Starick, E., M. Beer, B. Hoffmann, C. Staubach, O. Werner, A. Globig, G. Strebelow, C. Grund, M. Durban, F. J. Conraths, T. Mettenleiter, and T. Harder. 2008. Phylogenetic analysis of highly pathogenic avian influenza virus isolates from Germany in 2006 and 2007 suggest at least three separate introductions of H5N1 virus. Vet. Microbiol. 128:243-252.
21. Tamura, K., J. Dubley, M. Nei, and S. Kumar. 2007. Molecular evolutionary genetics analysis (MEGA) software version 4.0. Mol. Biol. Evol. 24:1596-1599.
22. Tamura, K., M. Nei, and S. Kumar. 2004. Prospects for inferring very large phylogenies by using the neighbor-joining method. Proc. Natl. Acad. Sci. USA 101(30):11030-11035.
23. Thompson, J. D., T. J. Gibson, F. Plewniak, F. Jeanmougin, and D. G. Higgins. 1997. The CLUSTAL X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res. 25:4876-4882.
24. Weber, S., T. Harder, E. Starick, M. Beer, W. Ortrud, B. Hoffmann, T. C. Mettenleiter, and E. Mundt. 2007. Molecular analysis of highly pathogenic avian influenza virus of subtype H5N1 isolated from wild birds and mammals in northern Germany. J. Gen. Virol. 88:554-558.
25. Xu, X., K. Subbatao, N. J. Cox, N. J. Guo, and Y. Guo. 1999. Genetic characterization of the pathogenic influenza A/Goose/Guangdong/I/96 (H5N1) virus: similarity of its hemagglutinin gene to those of H5N1 viruses from the 1997 outbreaks in Hong Kong. Virology 261:15-19. (Pubitemid 29395053)