Rapid diagnosis of avian influenza (AI) and assessment of pathogenicity of avian H5 and H7 subtypes by molecular methods

Developments in Biologicals

Volumn 126, Issue , 2006, Pages 171-177

  Senne, D A ^a   Pedersen, J C ^a   Suarez, D L ^b   Panigrahy, B ^a  

^a National Veterinary Services Laboratories   (United States)

^b AGRICULTURAL RESEARCH SERVICE   (United States)

Author keywords

Avian influenza; Cleavage site; H5; H7; Haemagglutinin; Highly pathogenic avian influenza; Low pathogenicity avian influenza; Poultry; Real time RT PCR; RT PCR; Sequencing; Virulence marker

Indexed keywords

HEMAGGLUTININ, AVIAN INFLUENZA A VIRUS; INFLUENZA VIRUS HEMAGGLUTININ;

AMINO ACID SEQUENCE; ANIMAL; ANIMAL DISEASE; AVIAN INFLUENZA; BIRD DISEASE; CHEMISTRY; CHICKEN; CONFERENCE PAPER; GENETICS; INFLUENZA VIRUS A; ISOLATION AND PURIFICATION; METHODOLOGY; PATHOGENICITY; REVERSE TRANSCRIPTION POLYMERASE CHAIN REACTION; VIROLOGY;

AMINO ACID SEQUENCE; ANIMALS; CHICKENS; HEMAGGLUTININ GLYCOPROTEINS, INFLUENZA VIRUS; INFLUENZA A VIRUS; INFLUENZA IN BIRDS; POULTRY DISEASES; REVERSE TRANSCRIPTASE POLYMERASE CHAIN REACTION;

EID: 33748591827     PISSN: 14246074     EISSN: None     Source Type: Book Series    
DOI: None     Document Type: Conference Paper

References (14)

1. Senne DA, Suarez DL, Stallnecht DE, Pedersen JC, Panigrahy B: Ecology and epidemiology of avian influenza in North and South America, in Schudel A, Lombard M (eds): OIE/FAO International Scientific Conference on Avian Influenza. Dev Biol (Basel). Basel, Karger, 2006, vol 124, pp 37-44.
2. Slemons RD, Johnson DC, Osborn JS, Hayes F: Type-A influenza viruses isolated from wild free-flying ducks in California. Avian Diseases 1974;18:119-124.
3. Kawaoka Y, Chambers TM, Sladen WL, Webster RG: Is the gene pool of influenza viruses in shorebirds and gulls different from that in wild ducks? Virology 1988;3:247-250.
4. Fouchier, RA, Munster V, Wallensten A, Bestebroer TM, Herfst S, Smith D, Rimmelzwaan GF, Olsen B, Osterhaus AD: Characterization of a novel influenza A virus haemagglutinin subtype (H16) obtained from black-headed gulls. J Virol 2005;79(5):2814-2822.
5. th ed. Ames, Iowa, Iowa State Press, Blackwell Publishing, 2003, pp 135-160.
6. OIE Standards Commission. Manual of Diagnostic Tests and Vaccines for Terrestrial Animals. World Organization for Animal Health (OIE), Paris, France. Fifth edition, 2005.
7. Webster RG: Influenza: an emerging disease. Emerging Infectious Diseases 1998;4(3):436-441.
8. Senne DA, Panigrahy B, Kawaoka Y, Pearson JE, Suss J, Lipking M, Kida H, Webster RG: Survey of the hemagglutinin (HA) cleavage site sequence of H5 and H7 avian influenza viruses: Amino acid sequence at the HA cleavage site is a marker of pathgenicity potential. Avian Diseases 1996;40:425-437.
9. Wood GW, McCauley JW, Bashiruddin JB, Alexander DJ: Deduced amino acid sequences at the haemagglutinin cleavage site of avian influenza A viruses of H5 and H7 subtypes. Arch Virol 1993;130:209-217.
10. Spackman E, Senne DA, Myers TJ, Bulaga LL, Garber LP, Perdue M, Lohman K, Daum LT, and Suarez DL: Development of a real-time reverse transcriptase PCR assay for type A influenza virus and the avian H5 and H7 hemagglutinin subtypes. J Clin Microbiol 2002;40(9):3256-3260.
11. Akey BL: Low-pathogenicity H7N2 avian influenza outbreak in Virginia during 2002. Avian Diseases 2003;47(3 Suppl):1099-1103.
12. Lee CW, Swayne DE, Linares JA, Senne DA, Suarez DL: 5N2 avian influenza outbreak in Texas in 2004: the first highly pathogenic strain in the United States in 20 years? J Virol 2005;79(17):11412-11421.
13. Suarez DL, Senne DA, Banks J, Brown IH, Essen SC, Lee CW, Manvell RJ, Mathieu-Benson C, Moreno V, Pedersen JC, Panigrahy B, Rojas H, Spackman E, Alexander DJ: Recombination resulting in virulence shift in avian influenza outbreak, Chile. Emerging Infectious Diseases 2004;10(4):693-699.
14. Hirst M, Astell CR, Griffith M, Coughlin SM, Moksa M, Zeng T, Smailus DE, Holt RA, Jones S, Marra MA, Petric M, Krajden M, Lawrence D, Mak A, Chow R, Skowronski DM, Tweed SA, Goh S, Brunham RC, Robinson J, Bowes V, Sojonky K, Byrne SK, Li Y, Kobasa D, Booth T, Paetzel M: Novel avian influenza H7N3 strain outbreak, British Columbia. Emerging Infectious Diseases 2004;10(12):2192-2195.