Molecular analysis of highly pathogenic avian influenza virus of subtype H5N1 isolated from wild birds and mammals in northern Germany

Journal of General Virology

Volumn 88, Issue 2, 2007, Pages 554-558

  Weber, Siegfried ^a   Harder, Timm ^a   Starick, Elke ^a   Beer, Martin ^a   Werner, Ortrud ^a   Hoffmann, Bernd ^a   Mettenleiter, Thomas C ^a   Mundt, Egbert ^a  

^a FEDERAL RESEARCH INSTITUTE FOR ANIMAL HEALTH   (Germany)

Author keywords

[No Author keywords available]

Indexed keywords

HEMAGGLUTININ; SIALIDASE; VIRUS RNA;

AMINO ACID SEQUENCE; AMINO ACID SUBSTITUTION; ARTICLE; AVIAN INFLUENZA; BIRD DISEASE; CONTROLLED STUDY; GERMANY; INFLUENZA VIRUS A H5N1; MAMMAL; MOLECULAR PHYLOGENY; NONHUMAN; NUCLEOTIDE SEQUENCE; PRIORITY JOURNAL; RNA REPLICATION; VIRUS ISOLATION; VIRUS VIRULENCE;

AMINO ACID SEQUENCE; AMINO ACID SUBSTITUTION; ANIMALS; ANIMALS, WILD; ANSERIFORMES; CAT DISEASES; CATS; DISEASE OUTBREAKS; GERMANY; HEMAGGLUTININ GLYCOPROTEINS, INFLUENZA VIRUS; HUMANS; INFLUENZA A VIRUS, H5N1 SUBTYPE; INFLUENZA IN BIRDS; MOLECULAR SEQUENCE DATA; NEURAMINIDASE; ORTHOMYXOVIRIDAE INFECTIONS; PHYLOGENY; SEQUENCE ANALYSIS, DNA;

AVES; AVIAN INFLUENZA VIRUS; MAMMALIA;

EID: 33846847831     PISSN: 00221317     EISSN: None     Source Type: Journal    
DOI: 10.1099/vir.0.82300-0     Document Type: Article

References (18)

1. Chen, H., Li, Y., Li, Z., Shi, J., Shinya, K., Deng, G., Qi, O, Tian, G., Fan, S. & other authors (2006). Properties and dissemination of H5NI viruses isolated during an influenza outbreak in migratory waterfowl in western China. J Virol 80, 5976-5983.
2. Fouchier, R. A., Munster, V., Wallensten, A., Bestebroer, T. M., Herfst, S., Smith, D., Rimmelzwaan, G. F., Olsen, B. & Osterhaus, A. D. (2005). Characterization of a novel influenza A virus hemagglutinin subtype (H16) obtained from black-headed gulls. J Virol 79, 2814-2822.
3. Gabriel, G., Dauber, B., Wolff, T., Planz, O., Wank, H. D. & Stech, J. (2005). The viral polymerase mediates adaptation of an avian influenza virus to a mammalian host. Proc Natl Acad Sci U S A 102, 18590-18595.
4. Harder, T. C. & Werner, O. (2006). Avian influenza. http:// www.influenzareport.com/ir/ai.htm
5. Hatta, M., Gao, P., Halfmann, P. & Kawaoka, Y. (2001). Molecular basis for high virulence of Hong Kong H5N1 influenza A viruses. Science 293, 1840-1842.
6. Hoffmann, E., Stech, J., Guan, Y., Webster, R. G. & Perez, D. R. (2001). Universal primer set for the full-length amplification of all influenza A viruses. Arch Virol 146, 2275-2289.
7. Kimura, M. (1980). A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences. J Mol Evol 16, 111-120.
8. Kumar, S., Tamura, K. & Nei, M. (2004). MEGA3: integrated software for Molecular Evolutionary Genetics Analysis and sequence alignment. Brief Bioinform 5, 150-163.
9. Matrosovich, M. N., Gambaryan, A. S., Teneberg, S., Piskarev, V. E., Yamnikova, S. S., Lvov, D. K., Robertson, J. S. & Karlsson, K A. (1997). Avian influenza A viruses differ from human viruses by recognition of sialyloligosaccharides and gangliosides and by a higher conservation of the HA receptor-binding site. Virology 233, 224-234.
10. Matrosovich, M., Tuzikov, A., Bovin, N., Gambaryan, A., Klimov, A., Castrucci, M. R., Donatelli, I. & Kawaoka, Y. (2000). Early alterations of the receptor-binding properties of H1, H2, and H3 avian influenza virus hemagglutinins after their introduction into mammals. J Virol 74, 8502-8512.
11. Matrosovich, M. N., Matrosovich, T. Y., Gray, T., Roberts, N. A. & Klenk, H. D. (2004). Human and avian influenza viruses target different cell types in cultures of human airway epithelium. Proc Natl Acad Sci U S A 101, 4620-4624.
12. Rott, R., Klenk, H. D., Nagai, Y. & Tashiro, M. (1995). Influenza viruses, cell enzymes, and pathogenicity. Am J Respir Crit Care Med 152, S16-S19.
13. Shestopalov, A. M., Durimanov, A. G., Evseenko, V. A., Ternovol, V. A., Rassadkin, Y. N., Razumova, Y. V., Zaykovskaya, A. V., Zolotykh, S. I. & Netesov, S. V. (2006). H5N1 influenza virus, domestic birds, Western Siberia, Russia. Emerg Infect Dis 12, 1167-1169.
14. Shinya, K., Hamm, S., Hatta, M., Ito, H., Ito, T. & Kawaoka, Y. (2004). PB2 amino acid at position 627 affects replicative efficiency, but not cell tropism, of Hong Kong H5NI influenza viruses in mice. Virology 320, 258-266.
15. Shinya, K, Ebina, M., Yamada, S., Ono, M., Kasai, N. & Kawaoka, Y. (2006). Avian flu: influenza virus receptors in the human airway. Nature 440, 435-436.
16. Strimmer, K. & von Haeseler, A. (1997). Likelihood-mapping: a simple method to visualize phylogenetic content of a sequence alignment. Proc Natl Acad Sci U S A 94, 6815-6819.
17. Subbarao, E. K., London, W. & Murphy, B. R. (1993). A single amino acid in the PB2 gene of influenza A virus is a determinant of host range. J Virol 67, 1761-1764.
18. van Riel, D., Munster, V. J., de Wit, E., Rimmelzwaan, G. F., Fouchier, R. A., Osterhaus, A. D. & Kuiken, T. (2006). H5NI virus attachment to lower respiratory tract. Science 312, 399.