Biological dose estimation of UVA laser microirradiation utilizing charged particle-induced protein foci

Mutagenesis

Volumn 25, Issue 3, 2010, Pages 289-297

  Splinter, J ^a   Jakob, B ^a   Lang, M ^b   Yano, K ^c   Engelhardt, J ^b   Hell, S W ^b   Chen, D J ^c   Durante, M ^a,d   Taucher Scholz, G ^a  

^a GSI HELMHOLTZZENTRUM FÜR SCHWERIONENFORSCHUNG GMBH   (Germany)

^b GERMAN CANCER RESEARCH CENTER DKFZ   (Germany)

^c UNIVERSITY OF TEXAS SOUTHWESTERN MEDICAL CENTER   (United States)

^d DARMSTADT UNIVERSITY OF TECHNOLOGY   (Germany)

Author keywords

[No Author keywords available]

Indexed keywords

REPLICATION FACTOR A; TELOMERIC REPEAT BINDING FACTOR 1; TELOMERIC REPEAT BINDING FACTOR 2;

4 PI MICROSCOPY; ARTICLE; CHARGED PARTICLE IRRADIATION; CHROMATIN STRUCTURE; CONFOCAL MICROSCOPY; DOSIMETRY; HUMAN; HUMAN CELL; LASER MICROIRRADIATION; PRIORITY JOURNAL; RADIATION DOSE; ULTRAVIOLET A RADIATION; ULTRAVIOLET IRRADIATION;

ALPHA PARTICLES; CELL LINE; CELL NUCLEUS; DNA DAMAGE; DOSE-RESPONSE RELATIONSHIP, RADIATION; HUMANS; LASERS; PROTEIN BINDING; REPLICATION PROTEIN A; TELOMERIC REPEAT BINDING PROTEIN 1; TELOMERIC REPEAT BINDING PROTEIN 2; ULTRAVIOLET RAYS;

EID: 77951967843     PISSN: 02678357     EISSN: 14643804     Source Type: Journal    
DOI: 10.1093/mutage/geq005     Document Type: Article

References (43)

1. Bekker-Jensen, S., Lukas, C., Kitagawa, R., Melander, F., Kastan, M. B., Bartek, J. and Lukas, J. (2006) Spatial organization of the mammalian genome surveillance machinery in response to DNA strand breaks. J. Cell Biol., 173, 195-206.
2. Mari, P. O., Florea, B. I., Persengiev, S. P. et al. (2006) Dynamic assembly of end-joining complexes requires interaction between Ku70/80 and XRCC4. Proc. Natl Acad. Sci. USA, 103, 18597-18602.
3. Uematsu, N., Weterings, E., Yano, K. et al. (2007) Autophosphorylation of DNA-PKcs regulates its dynamics at DNA double-strand breaks. J. Cell Biol., 177, 219-229.
4. Paull, T. T., Rogakou, E. P., Yamazaki, V., Kirchgessner, C. U., Gellert, M. and Bonner, W. M. (2000) A critical role for histone H2AX in recruitment of repair factors to nuclear foci after DNA damage. Curr. Biol., 10, 886-895.
5. Kruhlak, M. J., Celeste, A., Dellaire, G., Fernandez-Capetillo, O., Muller, W. G., McNally, J. G., Bazett-Jones, D. P. and Nussenzweig, A. (2006) Changes in chromatin structure and mobility in living cells at sites of DNA double-strand breaks. J. Cell Biol., 172, 823-834.
6. Rogakou, E. P., Boon, C., Redon, C. and Bonner, W. M. (1999) Megabase chromatin domains involved in DNA double-strand breaks in vivo. J. Cell Biol., 146, 905-916.
7. Sartori, A. A., Lukas, C., Coates, J., Mistrik, M., Fu, S., Bartek, J., Baer, R., Lukas, J. and Jackson, S. P. (2007) Human CtIP promotes DNA end resection. Nature, 450, 509-514.
8. Mortusevicz, O., Amé, J. C., Schreiber, V. and Leonhardt, H. (2007) Feedback-regulated poly (ADP-ribosyl) ation by PARP-1 is required for rapid response to DNA damage in living cells. Nucleic Acids Res., 35, 7665-7675.
9. Mortusevicz, O., Rothbauer, U., Cardoso, M. C. and Leonhardt, H. (2006) Differential recruitment of DNA Ligase I and III to DNA repair sites. Nucleic Acids Res., 34, 3523-3532.
10. Haince, J. F., McDonald, D., Rodrigue, A., Déry, U., Masson, J. Y., Hendzel, M. J. and Poirier, G. G. (2008) PARP-1-dependent kinetics of recruitment of MRE11 and NBS1 proteins to multiple DNA damage sites. J. Biol. Chem., 283, 1197-1208.
11. Hong, Z., Jiang, J., Lan, L., Nakajima, S., Kanno, S., Koseki, H. and Yasui, A. (2008) A polycomb group protein, PHF1, is involved in the response to DNA double-strand breaks in human cell. Nucleic Acids Res., 36, 2939-2947.
12. Aten, J. A., Stap, J., Krawczyk, P. M., Van Oven, C. H., Hoebe, R. A., Essers, J. and Kanaar, R. (2004) Dynamics of DNA double-strand breaks revealed by clustering of damaged chromosome domains. Science, 303, 92-95.
13. Williams, E. S., Stap, J., Essers, J., Ponnaiya, B., Luijsterburg, M. S., Krawczyk, P. M., Ullrich, R. L., Aten, J. A. and Bailey, S. M. (2007) DNA double-strand breaks are not sufficient to initiate recruitment of TRF2. Nat. Genet., 39, 698-699.
14. Jakob, B., Scholz, M. and Taucher-Scholz, G. (2003) Biological imaging of heavy charged-particle tracks. Radiat. Res., 159, 676-684.
15. Jakob, B., Scholz, M. and Taucher-Scholz, G. (2002) Characterization of CDKN1A (p21) binding to sites of heavy-ion-induced damage: colocalization with proteins involved in DNA repair. Int. J. Radiat. Biol., 78, 75-88.
16. Heiss, M., Fischer, B. E., Jakob, B., Fournier, C., Becker, G. and Taucher-Scholz, G. (2006) Targeted irradiation of mammalian cells using a heavyion microprobe. Radiat. Res., 165, 231-239.
17. Jakob, B., Rudolph, J. H., Gueven, N., Lavin, M. F. and Taucher-Scholz, G. (2005) Live cell imaging of heavy-ion-induced radiation responses by beamline microscopy. Radiat. Res., 163, 681-690.
18. Jakob, B., Splinter, J., Durante, M. and Taucher-Scholz, G. (2009) Live cell microscopy analysis of radiation-induced DNA double-strand break motion. Proc. Natl Acad. Sci. USA, 106, 3172-3177.
19. Mohanty, S. K., Rapp, A., Monajembashi, S., Gupta, P. K. and Greulich, K. O. (2002) Comet assay measurements of DNA damage in cells by laser microbeams and trapping beams with wavelengths spanning a range of 308 nm to 1064 nm. Radiat. Res., 157, 378-385.
20. Kong, X., Mohanty, S. K., Stephens, J., Heale, J. T., Gomez-Godinez, V., Shi, L. Z., Kim, J. S., Yokomori, K. and Berns, M. W. (2009) Comparative analysis of different laser systems to study cellular responses to DNA damage in mammalian cells. Nucleic Acids Res., 37, e68.
21. Meldrum, R. A., Botchway, S. W., Wharton, C. W. and Hirst, G. J. (2003) Nanoscale spatial induction of ultraviolet photoproducts in cellular DNA by three-photon near-infrared absorption. EMBO Rep., 4, 1144-1149.
22. Berns, M. W., Wang, Z., Dunn, A., Wallace, V. and Venugopalan, V. (2000) Gene inactivation by multiphoton-targeted photochemistry. Proc. Natl Acad. Sci. USA, 97, 9504-9507.
23. Sutherland, B. M. and Griffin, K. P. (1981) Absorption spectrum of DNA for wavelengths greater than 300 nm. Radiat. Res., 86, 399-409.
24. Bradshaw, P. S., Stavropoulos, D. J. and Meyn, M. S. (2005) Human telomeric protein TRF2 associates with genomic double-strand breaks as an early response to DNA damage. Nat. Genet., 37, 193-197.
25. Limoli, C. L. and Ward, J. F. (1993) A new method for introducing doublestrand breaks into cellular DNA. Radiat. Res., 134, 160-169.
26. Lang, M., Engelhardt, J. and Hell, S. W. (2007) 4Pi microscopy with linear fluorescence excitation. Opt. Lett., 32, 259-261.
27. Staudt, T., Lang, M., Medda, R., Engelhardt, J. and Hell, S. W. (2007) 2, 2'-Thiodiethanol: a new water soluble mounting medium for high resolution optical microscopy. Microsc. Res. Tech., 70, 1-9.
28. Jakob, B., Splinter, J. and Taucher-Scholz, G. (2009) Positional stability of damaged chromatin domains along radiation tracks in mammalian cells. Radiat. Res., 171, 405-418.
29. Scholz, M., Kellerer, A. M., Kraft-Weyrather, W. and Kraft, G. (1997) Computation of cell survival in heavy ion beams for therapy. Radiat. Environ. Biophys., 36, 59-66.
30. Krämer, M. and Kraft, G. (1994) Calculations of heavy-ion track structure. Radiat. Environ. Biophys., 33, 91-109.
31. de Boeck, G., Forsyth, R. G., Praet, M. and Hogendoom, P. C. W. (2008) Telomere-associated proteins: cross-talk between telomere maintenance and telomere-lengthening mechanisms. J. Pathol., 217, 327-344.
32. Tanaka, H., Mendonca, M. S., Bradshaw, P. S., Hoelz, D. J., Malkas, L. H., Meyn, M. S. and Gilley, D. (2005) DNA damage-induced phosphorylation of the human telomere-associated protein TRF2. Proc. Natl Acad. Sci. USA, 102, 15539-15544.
33. Prise, K. M., Ahnström, G., Belli, M. et al. (1998) A review of DSB induction data for varying quality radiations. Int. J. Radiat. Biol., 74, 173-184.
34. Löbrich, M., Cooper, P. K. and Rydberg, D. (1996) Non-random distribution of DNA double-strand breaks induced by particle irradiation. Int. J. Radiat. Biol., 70, 493-503.
35. Grigaravicius, P., Rapp, A. and Greulich, K. O. (2009) A direct view by immunofluorescent comet assay (IFCA) of DNA damage induced by nicking and cutting enzymes, ionizing 137Cs radiation, UV-A laser microbeam irradiation and the radiometric drug bleomycin. Mutagenesis, 24, 191-197.
36. Wang, Y., Zhou, X. Y., Wang, H., Huq, M. S. and Iliakis, G. (1999) Roles of Replication Protein A and DNA-dependent Protein Kinase in the regulation of DNA replication following DNA damage. J. Biol. Chem., 274, 22060-22064.
37. Huyen, Y., Zgheib, O., DiTullio, R. A., Jr. et al. (2004) Methylated lysine 79 of histone H3 targets 53BP1 to DNA double-strand breaks. Nature, 432, 406-411.
38. Kim, C., Snyder, R. O. and Wold, M. S. (1992) Binding properties of Replication Protein A from human and yeast cells. Mol. Cell. Biol., 12, 3050-3059.
39. Bewersdorf, J., Bennett, B. T. and Knight, K. L. (2006) H2AX chromatin structures and their response to DNA damage revealed by 4Pi microscopy. Proc. Natl Acad. Sci. USA, 103, 18137-18142.
40. Vogel, A., Lorenz, K., Horneffer, V., Hüttmann, G., von Smolinski, D. and Gebert, A. (2007) Mechanisms of laser-induced dissection and transport of histologic specimens. Biophys. J., 93, 4481-4500.
41. Tashiro, S., Walter, J., Shinohara, A., Kamada, N. and Cremer, T. (2000) Rad51 accumulation at sites of DNA damage and in postreplicative chromatin. J. Cell Biol., 150, 283-291.
42. Mao, Z., Seluanov, A., Jiang, Y. and Gorbunova, V. (2007) TRF2 is required for repair of nontelomeric DNA double-strand breaks by homologous recombination. Proc. Natl Acad. Sci. USA, 104, 13068-13073.
43. Peak, J. G. and Peak, M. J. (1990) Ultraviolet light induces double-strand breaks in DNA of cultured human P3 cells as measured by neutral filter elution. J. Photochem. Photobiol., 52, 387-393.