-
1
-
-
0035812694
-
Protein structure prediction and structural genomics
-
DOI 10.1126/science.1065659
-
D Baker A Sali 2001 Protein structure prediction and structural genomics Science 294 93 96 10.1126/science.1065659 1:CAS:528:DC%2BD3MXnsFyisbY%3D 11588250 (Pubitemid 32952955)
-
(2001)
Science
, vol.294
, Issue.5540
, pp. 93-96
-
-
Baker, D.1
Sali, A.2
-
3
-
-
53249113119
-
Tracking the structural dynamics of proteins in solution using time-resolved wide-angle X-ray scattering
-
10.1038/nmeth.1255 1:CAS:528:DC%2BD1cXhtFKktLbI 18806790
-
M Cammarata M Levantino F Schotte PA Anfinrud F Ewald J Choi A Cupane M Wulff J Ihee 2008 Tracking the structural dynamics of proteins in solution using time-resolved wide-angle X-ray scattering Nat Methods 5 881 886 10.1038/nmeth.1255 1:CAS:528:DC%2BD1cXhtFKktLbI 18806790
-
(2008)
Nat Methods
, vol.5
, pp. 881-886
-
-
Cammarata, M.1
Levantino, M.2
Schotte, F.3
Anfinrud, P.A.4
Ewald, F.5
Choi, J.6
Cupane, A.7
Wulff, M.8
Ihee, J.9
-
4
-
-
0034705330
-
Reconstruction of protein form with x-ray solution scattering and a genetic algorithm
-
10.1006/jmbi.2000.3784 1:CAS:528:DC%2BD3cXkt1KgtLY%3D 10873453
-
P Chacon JF Diaz F Moran JM Andreu 2000 Reconstruction of protein form with x-ray solution scattering and a genetic algorithm J Mol Biol 299 1289 1302 10.1006/jmbi.2000.3784 1:CAS:528:DC%2BD3cXkt1KgtLY%3D 10873453
-
(2000)
J Mol Biol
, vol.299
, pp. 1289-1302
-
-
Chacon, P.1
Diaz, J.F.2
Moran, F.3
Andreu, J.M.4
-
5
-
-
0028912595
-
A sampling problem in molecular dynamics simulations of macromolecules
-
10.1073/pnas.92.8.3288 1:CAS:528:DyaK2MXltFSntLc%3D 7724554
-
JB Clarage T Romo BK Andrews BM Pettitt GN Phillips 1995 A sampling problem in molecular dynamics simulations of macromolecules Proc Natl Acad Sci 92 3288 3292 10.1073/pnas.92.8.3288 1:CAS:528:DyaK2MXltFSntLc%3D 7724554
-
(1995)
Proc Natl Acad Sci
, vol.92
, pp. 3288-3292
-
-
Clarage, J.B.1
Romo, T.2
Andrews, B.K.3
Pettitt, B.M.4
Phillips, G.N.5
-
6
-
-
38549146894
-
The Pfam protein families database
-
DOI 10.1093/nar/gkm960
-
RD Finn J Tate J Mistry PC Coggill SJ Sammut HR Hotz G Ceric K Forslund SR Eddy EL Sonnhammer A Bateman 2008 The Pfam protein families database Nucleic Acids Res 36 D281 D288 10.1093/nar/gkm960 1:CAS:528:DC%2BD1cXhtVWiu7c%3D 18039703 (Pubitemid 351149737)
-
(2008)
Nucleic Acids Research
, vol.36
, Issue.SUPPL. 1
-
-
Finn, R.D.1
Tate, J.2
Mistry, J.3
Coggill, P.C.4
Sammut, S.J.5
Hotz, H.-R.6
Ceric, G.7
Forslund, K.8
Eddy, S.R.9
Sonnhammer, E.L.L.10
Bateman, A.11
-
7
-
-
0141571313
-
High-resolution wide-angle X-ray scattering of protein solutions: Effect of beam dose on protein integrity
-
10.1107/S0909049503016583 1:CAS:528:DC%2BD3sXmslCmtrc%3D 12944630
-
RF Fischetti DJ Rodi A Mirza TC Irving E Kondrashkina L Makowski 2003 High-resolution wide-angle X-ray scattering of protein solutions: effect of beam dose on protein integrity J Synchrotron Radiat 10 398 404 10.1107/ S0909049503016583 1:CAS:528:DC%2BD3sXmslCmtrc%3D 12944630
-
(2003)
J Synchrotron Radiat
, vol.10
, pp. 398-404
-
-
Fischetti, R.F.1
Rodi, D.J.2
Mirza, A.3
Irving, T.C.4
Kondrashkina, E.5
Makowski, L.6
-
8
-
-
5444263418
-
Wide-angle X-ray solution scattering as a probe of ligand-induced conformational changes in proteins
-
DOI 10.1016/j.chembiol.2004.08.013, PII S1074552104002467
-
RF Fischetti DJ Rodi DB Gore L Makowski 2004 Wide angle x-ray solution scattering as a probe of ligand-induced conformational changes in proteins Chem Biol 11 1431 1443 10.1016/j.chembiol.2004.08.013 1:CAS:528:DC%2BD2cXos1Chs7o%3D 15489170 (Pubitemid 39351380)
-
(2004)
Chemistry and Biology
, vol.11
, Issue.10
, pp. 1431-1443
-
-
Fischetti, R.F.1
Rodi, D.J.2
Gore, D.B.3
Makowski, L.4
-
9
-
-
19944427743
-
The BioCat undulator beamline 18ID: A facility for biological non-crystalline diffraction and X-ray absorption spectroscopy at the Advanced Photon Source
-
DOI 10.1107/S0909049504016760
-
RF Fischetti S Stepanov G Rosenbaum R Barrea E Black D Gore R Heurich E Kondrashkina AJ Kropf S Wang K Zhang TC Irving GB Bunker 2004 The BioCAT undulator beamline 18ID: a facility for biological non-crystalline diffraction and X-ray absorption spectroscopy at the advanced photon source J Synchrotron Radiat 11 399 405 10.1107/S0909049504016760 1:CAS:528:DC%2BD2cXms1Kqur4%3D 15310956 (Pubitemid 40087596)
-
(2004)
Journal of Synchrotron Radiation
, vol.11
, Issue.5
, pp. 399-405
-
-
Fischetti, R.1
Stepanov, S.2
Rosenbaum, G.3
Barrea, R.4
Black, E.5
Gore, D.6
Heurich, R.7
Kondrashkina, E.8
Kropf, A.J.9
Wang, S.10
Zhang, K.11
Irving, T.C.12
Bunker, G.B.13
-
10
-
-
51249118082
-
Integration of small-angle X-Ray scattering data into structural modeling of proteins and their assemblies
-
10.1016/j.jmb.2008.07.074 18694757
-
F Förster B Webb KA Krukenberg H Tsuruta DA Agard A Sali 2008 Integration of small-angle X-Ray scattering data into structural modeling of proteins and their assemblies J Mol Biol 382 1089 1106 10.1016/j.jmb.2008.07.074 18694757
-
(2008)
J Mol Biol
, vol.382
, pp. 1089-1106
-
-
F. Förster1
Webb, B.2
Krukenberg, K.A.3
Tsuruta, H.4
Agard, D.A.5
Sali, A.6
-
11
-
-
0000273258
-
An improved method for calculating the contribution of solvent to the X-ray diffraction pattern of biological molecules
-
10.1107/S0021889878014296 1:CAS:528:DyaE1MXmvVOitQ%3D%3D
-
RDB Fraser TP MacRae E Suzuki 1978 An improved method for calculating the contribution of solvent to the X-ray diffraction pattern of biological molecules J Appl Cryst 11 693 701 10.1107/S0021889878014296 1:CAS:528: DyaE1MXmvVOitQ%3D%3D
-
(1978)
J Appl Cryst
, vol.11
, pp. 693-701
-
-
Fraser, R.D.B.1
MacRae, T.P.2
Suzuki, E.3
-
12
-
-
0026320866
-
The energy landscapes and motions of proteins
-
10.1126/science.1749933 1:CAS:528:DyaK38XhtVWgtro%3D 1749933
-
H Frauenfelder SG Sligar PG Wolynes 1991 The energy landscapes and motions of proteins Science 254 1598 1603 10.1126/science.1749933 1:CAS:528:DyaK38XhtVWgtro%3D 1749933
-
(1991)
Science
, vol.254
, pp. 1598-1603
-
-
Frauenfelder, H.1
Sligar, S.G.2
Wolynes, P.G.3
-
15
-
-
36849048228
-
Intrinsic motions along an enzymatic reaction trajectory
-
DOI 10.1038/nature06410, PII NATURE06410
-
KA Henzler-Wildman V Thai M Lei M Ott M Wolf-Watz T Fenn E Pozharski MA Wilson GA Petsko M Karplus CG Hubner D Kern 2007 Intrinsic motions along an enzymatic reaction trajectory Nature 450 838 844 10.1038/nature06410 1:CAS:528:DC%2BD2sXhtl2gsb3P 18026086 (Pubitemid 350231334)
-
(2007)
Nature
, vol.450
, Issue.7171
, pp. 838-844
-
-
Henzler-Wildman, K.A.1
Thai, V.2
Lei, M.3
Ott, M.4
Wolf-Watz, M.5
Fenn, T.6
Pozharski, E.7
Wilson, M.A.8
Petsko, G.A.9
Karplus, M.10
Hubner, C.G.11
Kern, D.12
-
16
-
-
36849039429
-
A hierarchy of timescales in protein dynamics is linked to enzyme catalysis
-
DOI 10.1038/nature06407, PII NATURE06407
-
KA Henzler-Wildman M Lei V Thai SJ Kerns M Karplus D Kern 2007 A hierarchy of timescales in protein dynamics is linked to enzyme catalysis Nature 450 913 916 10.1038/nature06407 1:CAS:528:DC%2BD2sXhtl2gsb3N 18026087 (Pubitemid 350231333)
-
(2007)
Nature
, vol.450
, Issue.7171
, pp. 913-916
-
-
Henzler-Wildman, K.A.1
Lei, M.2
Thai, V.3
Kerns, S.J.4
Karplus, M.5
Kern, D.6
-
17
-
-
0036657545
-
Structural hierarchy of several proteins observed by wide-angle solution scattering
-
10.1107/S0909049502006593 1:CAS:528:DC%2BD38XkvFejtbw%3D 12091726
-
M Hirai H Iwase T Hayakawa K Miura K Inoue 2002 Structural hierarchy of several proteins observed by wide-angle solution scattering J Synchrotron Radiat 9 202 205 10.1107/S0909049502006593 1:CAS:528:DC%2BD38XkvFejtbw%3D 12091726
-
(2002)
J Synchrotron Radiat
, vol.9
, pp. 202-205
-
-
Hirai, M.1
Iwase, H.2
Hayakawa, T.3
Miura, K.4
Inoue, K.5
-
18
-
-
3142690417
-
Hierarchical map of protein unfolding and refolding at thermal equilibrium revealed by wide-angle X-ray scattering
-
DOI 10.1021/bi0499664
-
M Hirai M Koizumi T Hayakawa H Takahashi S Abe H Hirai K Miura K Inoue 2004 Hierarchical map of protein unfolding and refolding at thermal equilibrium revealed by wide-angle x-ray scattering Biochemistry 43 9036 9049 10.1021/bi0499664 1:CAS:528:DC%2BD2cXltFWhtrY%3D 15248761 (Pubitemid 38924438)
-
(2004)
Biochemistry
, vol.43
, Issue.28
, pp. 9036-9049
-
-
Hirai, M.1
Koizumi, M.2
Hayakawa, T.3
Takahashi, H.4
Abe, S.5
Hirai, H.6
Miura, K.7
Inoue, K.8
-
19
-
-
0027440362
-
Protein structure comparison by alignment of distance matrices
-
DOI 10.1006/jmbi.1993.1489
-
L Holm C Sander 1993 Protein structure alignment by alignment of distance matrices J Mol Biol 233 123 138 10.1006/jmbi.1993.1489 1:CAS:528: DyaK3sXms1Gru7o%3D 8377180 (Pubitemid 23288916)
-
(1993)
Journal of Molecular Biology
, vol.233
, Issue.1
, pp. 123-138
-
-
Holm, L.1
Sander, C.2
-
20
-
-
34249889604
-
Protein structure space is much more than the sum of its folds
-
DOI 10.1038/nsmb0607-458, PII NSMB0607458
-
B Honig 2007 Protein structure space is much more than the sum of its folds Nat Struct Mol 14 458 10.1038/nsmb0607-458 1:CAS:528:DC%2BD2sXmtVyjt7o%3D (Pubitemid 46871795)
-
(2007)
Nature Structural and Molecular Biology
, vol.14
, Issue.6
, pp. 458
-
-
Honig, B.1
-
22
-
-
68349097394
-
Robust, high-throughput solution structural analyses by small angle X-ray scattering (SAXS)
-
10.1038/nmeth.1353 1:CAS:528:DC%2BD1MXoslymtrs%3D 19620974
-
GL Hura AL Menon M Hannel RP Rambo FL Poole SE Tsutakawa FE Jenny S Classen KA Frankel RC Hopkins S-J Yang JW Scott BD Dillard MW Adams JA Tainer 2009 Robust, high-throughput solution structural analyses by small angle X-ray scattering (SAXS) Nat Methods 6 606 612 10.1038/nmeth.1353 1:CAS:528: DC%2BD1MXoslymtrs%3D 19620974
-
(2009)
Nat Methods
, vol.6
, pp. 606-612
-
-
Hura, G.L.1
Menon, A.L.2
Hannel, M.3
Rambo, R.P.4
Poole, F.L.5
Tsutakawa, S.E.6
Jenny, F.E.7
Classen, S.8
Frankel, K.A.9
Hopkins, R.C.10
Yang, S.-J.11
Scott, J.W.12
Dillard, B.D.13
Adams, M.W.14
Tainer, J.A.15
-
23
-
-
0024485714
-
Rapid calculation of the solution scattering profile from a macromolecule of known structure
-
10.1002/prot.340050209 1:CAS:528:DyaL1MXkt1Snt7Y%3D 2748578
-
EE Lattman 1989 Rapid calculation of the solution scattering profile from a macromolecule of known structure Proteins 5 149 155 10.1002/prot.340050209 1:CAS:528:DyaL1MXkt1Snt7Y%3D 2748578
-
(1989)
Proteins
, vol.5
, pp. 149-155
-
-
Lattman, E.E.1
-
24
-
-
35148826056
-
The Free Energy Landscapes Governing Conformational Changes in a Glutamate Receptor Ligand-Binding Domain
-
DOI 10.1016/j.str.2007.07.015, PII S0969212607002900
-
AY Lau B Roux 2007 The free energy landscapes governing conformational changes in a glutamate receptor ligand-binding domain Structure 15 1203 1214 10.1016/j.str.2007.07.015 1:CAS:528:DC%2BD2sXhtFKhsL%2FF 17937910 (Pubitemid 47542487)
-
(2007)
Structure
, vol.15
, Issue.10
, pp. 1203-1214
-
-
Lau, A.Y.1
Roux, B.2
-
26
-
-
12744263121
-
Simultaneous determination of protein structure and dynamics
-
10.1038/nature03199 1:CAS:528:DC%2BD2MXjt1Wjtw%3D%3D 15650731
-
K Lindorff-Larsen RB Best MA DePristo CM Dobson M Vendruscolo 2005 Simultaneous determination of protein structure and dynamics Nature 433 128 132 10.1038/nature03199 1:CAS:528:DC%2BD2MXjt1Wjtw%3D%3D 15650731
-
(2005)
Nature
, vol.433
, pp. 128-132
-
-
Lindorff-Larsen, K.1
Best, R.B.2
DePristo, M.A.3
Dobson, C.M.4
Vendruscolo, M.5
-
27
-
-
0018863001
-
Recent developments in solution x-ray scattering
-
10.1146/annurev.bb.09.060180.000245 1:CAS:528:DyaL3cXksVSltrs%3D
-
V Luzzati A Tardieu 1980 Recent developments in solution x-ray scattering Ann Rev Biophys Bioeng 9 1 29 10.1146/annurev.bb.09.060180.000245 1:CAS:528:DyaL3cXksVSltrs%3D
-
(1980)
Ann Rev Biophys Bioeng
, vol.9
, pp. 1-29
-
-
Luzzati, V.1
Tardieu, A.2
-
28
-
-
36549080494
-
Molecular crowding inhibits intramolecular breathing motions in proteins
-
DOI 10.1016/j.jmb.2007.07.075, PII S0022283607010534
-
L Makowski DJ Rodi S Mandava D Minh B Gore RF Fischetti 2008 Molecular crowding inhibits intramolecular breathing motions in proteins J Mol Biol 375 529 546 10.1016/j.jmb.2007.07.075 1:CAS:528:DC%2BD2sXhsVWjsrjE 18031757 (Pubitemid 350192471)
-
(2008)
Journal of Molecular Biology
, vol.375
, Issue.2
, pp. 529-546
-
-
Makowski, L.1
Rodi, D.J.2
Mandava, S.3
Minh, D.D.L.4
Gore, D.B.5
Fischetti, R.F.6
-
29
-
-
52949104024
-
Characterization of protein fold using wide angle X-ray solution scattering
-
10.1016/j.jmb.2008.08.038 1:CAS:528:DC%2BD1cXht1Snu77P 18786543
-
L Makowski DJ Rodi S Mandava S Devrapahli RF Fischetti 2008 Characterization of protein fold using wide angle X-ray solution scattering J Mol Biol 383 731 744 10.1016/j.jmb.2008.08.038 1:CAS:528:DC%2BD1cXht1Snu77P 18786543
-
(2008)
J Mol Biol
, vol.383
, pp. 731-744
-
-
Makowski, L.1
Rodi, D.J.2
Mandava, S.3
Devrapahli, S.4
Fischetti, R.F.5
-
30
-
-
0017776823
-
Dynamics of folded proteins
-
10.1038/267585a0 1:CAS:528:DyaE2sXlsVOgsbg%3D 301613
-
JA McCammon BR Gelin M Karplus 1977 Dynamics of folded proteins Nature 267 585 590 10.1038/267585a0 1:CAS:528:DyaE2sXlsVOgsbg%3D 301613
-
(1977)
Nature
, vol.267
, pp. 585-590
-
-
McCammon, J.A.1
Gelin, B.R.2
Karplus, M.3
-
31
-
-
64549083267
-
Simulated X-Ray scattering of protein solutions using explicit-solvent molecular dynamics
-
Park S, Bardhan JP, Roux 3 B, Makowski L (2009) Simulated X-Ray scattering of protein solutions using explicit-solvent molecular dynamics. J Chem Phys 130:134114
-
(2009)
J Chem Phys
, vol.130
, pp. 134114
-
-
Park, S.1
Bardhan, J.P.2
Roux III, B.3
Makowski, L.4
-
32
-
-
84990419571
-
Improved technique for calculating x-ray scattering intensity of biopolymers in solution: Evaluation of the form, volume and surface of a particle
-
10.1002/bip.360220607 1:CAS:528:DyaL3sXktF2isLk%3D
-
MY Pavlov BA Fedorov 1983 Improved technique for calculating x-ray scattering intensity of biopolymers in solution: evaluation of the form, volume and surface of a particle Bioploymers 22 1507 1522 10.1002/bip.360220607 1:CAS:528:DyaL3sXktF2isLk%3D
-
(1983)
Bioploymers
, vol.22
, pp. 1507-1522
-
-
Pavlov, M.Y.1
Fedorov, B.A.2
-
33
-
-
23244455562
-
Global rigid body modeling of macromolecular complexes against small-angle scattering data
-
DOI 10.1529/biophysj.105.064154
-
MV Petoukhov DI Svergun 2005 Global rigid body modeling of macromolecular complexes against small-angle scattering data Biophys J 89 1237 1250 10.1529/biophysj.105.064154 1:CAS:528:DC%2BD2MXnvVSrs7k%3D 15923225 (Pubitemid 41099005)
-
(2005)
Biophysical Journal
, vol.89
, Issue.2
, pp. 1237-1250
-
-
Petoukhov, M.V.1
Svergun, D.I.2
-
34
-
-
37149049312
-
X-ray solution scattering (SAXS) combined with crystallography and computation: Defining accurate macromolecular structures, conformations and assemblies in solution
-
1:CAS:528:DC%2BD2sXhsVejs7nJ 18078545
-
CD Putnam M Hammel GL Hura JA Tainer 2007 X-ray solution scattering (SAXS) combined with crystallography and computation: defining accurate macromolecular structures, conformations and assemblies in solution Q Rev Biophys 40 191 285 1:CAS:528:DC%2BD2sXhsVejs7nJ 18078545
-
(2007)
Q Rev Biophys
, vol.40
, pp. 191-285
-
-
Putnam, C.D.1
Hammel, M.2
Hura, G.L.3
Tainer, J.A.4
-
35
-
-
35148879631
-
Detection of functional ligand-binding events using synchrotron X-ray scattering
-
DOI 10.1177/1087057107306104
-
DJ Rodi S Mandava DB Gore L Makowski RF Fischetti 2007 Detection of functional ligand binding events using synchrotron X-ray scattering J Biomol Screen 12 994 998 10.1177/1087057107306104 1:CAS:528:DC%2BD2sXht12rs7vM 17942792 (Pubitemid 47548590)
-
(2007)
Journal of Biomolecular Screening
, vol.12
, Issue.7
, pp. 994-998
-
-
Rodi, D.J.1
Mandava, S.2
Gore, D.B.3
Makowski, L.4
Fischetti, R.F.5
-
36
-
-
84856043672
-
A mathematical theory of communication
-
623-656
-
Shannon C (1948) A mathematical theory of communication. Bell Syst Tech J. 27:379-423, 623-656
-
(1948)
Bell Syst Tech J.
, vol.27
, pp. 379-423
-
-
Shannon, C.1
-
37
-
-
0037701574
-
Prototype of a database for rapid protein classification based on solution scattering data
-
10.1107/S0021889803000220 1:CAS:528:DC%2BD3sXjtVOgu70%3D
-
AV Sokolova VV Volkov DI Svergun 2003 Prototype of a database for rapid protein classification based on solution scattering data J Appl Cryst 36 865 868 10.1107/S0021889803000220 1:CAS:528:DC%2BD3sXjtVOgu70%3D
-
(2003)
J Appl Cryst
, vol.36
, pp. 865-868
-
-
Sokolova, A.V.1
Volkov, V.V.2
Svergun, D.I.3
-
38
-
-
1642575091
-
Database for rapid protein classification based on small-angle X-ray scattering data
-
DOI 10.1134/1.1627438
-
AV Sokolova VV Volkov DI Svergun 2003 Database for rapid protein classification based on small-angle X-ray scattering data Crystallogr Rep 48 1027 1033 10.1134/1.1627438 (Pubitemid 38125289)
-
(2003)
Crystallography Reports
, vol.48
, Issue.6
, pp. 959-965
-
-
Sokolova, A.V.1
Volkov, V.2
Svergun, D.I.3
-
39
-
-
0035010533
-
Determination of domain structure of protreins from x-ray solution scattering
-
10.1016/S0006-3495(01)76260-1 1:CAS:528:DC%2BD3MXkvFSqt7w%3D 11371467
-
DI Svergun MV Petoukhov MH Koch 2001 Determination of domain structure of protreins from x-ray solution scattering Biophys J 80 2946 2953 10.1016/S0006-3495(01)76260-1 1:CAS:528:DC%2BD3MXkvFSqt7w%3D 11371467
-
(2001)
Biophys J
, vol.80
, pp. 2946-2953
-
-
Svergun, D.I.1
Petoukhov, M.V.2
Koch, M.H.3
-
40
-
-
0029185933
-
CRYSOL - A program to evaluate X-ray solution scattering of biological macromolecules from atomic coordinates
-
DOI 10.1107/S0021889895007047
-
D Svergun C Barferato MHJ Koch 1995 CRYSOL-a program to evaluate x-ray solution scattering of biological macromolecules from atomic coordinates J Appl Cryst 28 768 773 10.1107/S0021889895007047 1:CAS:528:DyaK28XksFektg%3D%3D (Pubitemid 3014671)
-
(1995)
Journal of Applied Crystallography
, vol.28
, Issue.6
, pp. 768-773
-
-
Svergun, D.1
Barberato, C.2
Koch, M.H.3
-
42
-
-
0038715974
-
Evaluation of three algorithms for ab initio determination of three-dimensional shape from one-dimensional solution scattering profiles
-
10.1107/S002188980202335X
-
Y Takahashi Y Nishikawa T Fujisawa 2003 Evaluation of three algorithms for ab initio determination of three-dimensional shape from one-dimensional solution scattering profiles J Appl Cryst 36 249 252 10.1107/S002188980202335X
-
(2003)
J Appl Cryst
, vol.36
, pp. 249-252
-
-
Takahashi, Y.1
Nishikawa, Y.2
Fujisawa, T.3
-
43
-
-
0037188386
-
Protein conformations explored by difference high-angle solution X-ray scattering: Oxidation state and temperature dependent changes in cytochrome c
-
DOI 10.1021/bi015931h
-
DM Tiede R Zhang S Seifert 2002 Protein conformations explored by difference high-angle solution x-ray scattering: oxidation state and temperature dependent changes in cytochrome C Biochem 41 6605 6614 10.1021/bi015931h 1:CAS:528:DC%2BD38Xjt1Krs7g%3D (Pubitemid 34547351)
-
(2002)
Biochemistry
, vol.41
, Issue.21
, pp. 6605-6614
-
-
Tiede, D.M.1
Zhang, R.2
Seifert, S.3
-
44
-
-
34248230589
-
Convergent chemical synthesis and crystal structure of a 203 amino acid "covalent dimer" HIV-1 protease enzyme molecule
-
DOI 10.1002/anie.200604087
-
VY Torbeev SB Kent 2007 Convergent chemical synthesis and crystal structure of a 203 amino acid 'covalent dimer' HIV-1 protease enzyme molecule Angew Chem Int Ed Engl 46 1667 1674 10.1002/anie.200604087 1:CAS:528: DC%2BD2sXjvFSrtbg%3D 17397076 (Pubitemid 46981347)
-
(2007)
Angewandte Chemie - International Edition
, vol.46
, Issue.10
, pp. 1667-1670
-
-
Torbeev, V.Yu.1
Kent, S.B.H.2
-
45
-
-
34250380707
-
HIV-1 protease substrate binding and product release pathways explored with coarse-grained molecular dynamics
-
DOI 10.1529/biophysj.106.100560
-
J Trylska V Tozzimi CE Chang JA McCammon 2007 HIV-1 protease substrate binding and product release pathways explored with coarse-grained molecular dynamics Biophys J 92 4179 4187 10.1529/biophysj.106.100560 1:CAS:528: DC%2BD2sXmsFeksL0%3D 17384072 (Pubitemid 46910534)
-
(2007)
Biophysical Journal
, vol.92
, Issue.12
, pp. 4179-4187
-
-
Trylska, J.1
Tozzini, V.2
Chang, C.-E.A.3
McCammon, J.A.4
-
46
-
-
34248363563
-
Structural analysis of flexible proteins in solution by small angle X-ray scattering combined with crystallography
-
10.1016/j.jsb.2006.09.008 17182256
-
SE Tsutakawa GL Hura KA Frankel PK Cooper JA Tainer 2006 Structural analysis of flexible proteins in solution by small angle X-ray scattering combined with crystallography J Struct Biol 158 214 223 10.1016/j.jsb.2006.09. 008 17182256
-
(2006)
J Struct Biol
, vol.158
, pp. 214-223
-
-
Tsutakawa, S.E.1
Hura, G.L.2
Frankel, K.A.3
Cooper, P.K.4
Tainer, J.A.5
-
47
-
-
33748799981
-
Dynamic visions of enzymatic reactions
-
DOI 10.1126/science.1132851
-
M Vendruscolo CM Dobson 2006 Dynamic visions of enzymatic reactions Science 313 1586 1587 10.1126/science.1132851 1:CAS:528:DC%2BD28XpslKqsrc%3D 16973868 (Pubitemid 44414023)
-
(2006)
Science
, vol.313
, Issue.5793
, pp. 1586-1587
-
-
Vendruscolo, M.1
Dobson, C.M.2
-
48
-
-
26244437278
-
Protein family clustering for structural genomics
-
DOI 10.1016/j.jmb.2005.08.058, PII S0022283605010120
-
Y Yan J Moult 2005 Protein family clustering for structural genomics J Mol Biol 353 744 759 10.1016/j.jmb.2005.08.058 1:CAS:528:DC%2BD2MXhtVOktrjP 16185712 (Pubitemid 41414745)
-
(2005)
Journal of Molecular Biology
, vol.353
, Issue.3
, pp. 744-759
-
-
Yan, Y.1
Moult, J.2
-
49
-
-
68949116065
-
X-ray solution scattering combined with computation characterizing protein folds and multiple conformational states
-
10.1016/j.bpj.2009.03.036 1:CAS:528:DC%2BD1MXpsFOrtrg%3D 19486669
-
S Yang S Park L Makowski B Roux 2009 X-ray solution scattering combined with computation characterizing protein folds and multiple conformational states Biophys J 96 4449 4463 10.1016/j.bpj.2009.03.036 1:CAS:528:DC%2BD1MXpsFOrtrg%3D 19486669
-
(2009)
Biophys J
, vol.96
, pp. 4449-4463
-
-
Yang, S.1
Park, S.2
Makowski, L.3
Roux, B.4
|