-
1
-
-
74249100609
-
Accurate and rapid identification of bacterial species from positive blood cultures with a DNA-based microarray platform: An observational study
-
Tissari P, Zumla A, Tarkka E et al. Accurate and rapid identification of bacterial species from positive blood cultures with a DNA-based microarray platform: an observational study. Lancet 375(9710), 224-230 (2010).
-
(2010)
Lancet
, vol.375
, Issue.9710
, pp. 224-230
-
-
Tissari, P.1
Zumla, A.2
Tarkka, E.3
-
3
-
-
0034461021
-
Detection and identification of Mycobacteria by amplification of the internal transcribed spacer regions with genus- and species-specific PCR primers
-
Park H, Jang H, Kim C et al. Detection and identification of Mycobacteria by amplification of the internal transcribed spacer regions with genus- and species-specific PCR primers. J. Clin. Microbiol. 38(11), 4080-4085 (2000).
-
(2000)
J. Clin. Microbiol
, vol.38
, Issue.11
, pp. 4080-4085
-
-
Park, H.1
Jang, H.2
Kim, C.3
-
4
-
-
36348992639
-
Quantitative detection of Staphylococcus aureus and Enterococcus faecalis DNA in blood to diagnose bacteremia in patients in the intensive care unit
-
Peters RP, van Agtmael MA, Gierveld S et al. Quantitative detection of Staphylococcus aureus and Enterococcus faecalis DNA in blood to diagnose bacteremia in patients in the intensive care unit. J. Clin. Microbiol. 45(11), 3641-3646 (2007).
-
(2007)
J. Clin. Microbiol
, vol.45
, Issue.11
, pp. 3641-3646
-
-
Peters, R.P.1
Van Agtmael, M.A.2
Gierveld, S.3
-
5
-
-
0033952657
-
Rapid diagnosis of bacteremia by universal amplification of 23S ribosomal DNA followed by hybridization to an oligonucleotide array
-
Anthony RM, Brown TJ, French GL. Rapid diagnosis of bacteremia by universal amplification of 23S ribosomal DNA followed by hybridization to an oligonucleotide array. J. Clin. Microbiol. 38(2), 781-788 (2000).
-
(2000)
J. Clin. Microbiol
, vol.38
, Issue.2
, pp. 781-788
-
-
Anthony, R.M.1
Brown, T.J.2
French, G.L.3
-
6
-
-
0036018472
-
Sequence-specific identification of 18 pathogenic microorganisms using microarray technology
-
Wilson WJ, Strout CL, DeSantis TZ, Stilwell JL, Carrano AV, Andersen GL. Sequence-specific identification of 18 pathogenic microorganisms using microarray technology. Mol. Cell. Probe 16, 119-127 (2002).
-
(2002)
Mol. Cell. Probe
, vol.16
, pp. 119-127
-
-
Wilson, W.J.1
Strout, C.L.2
De Santis, T.Z.3
Stilwell, J.L.4
Carrano, A.V.5
Andersen, G.L.6
-
7
-
-
24944497628
-
Multiplexed detection of pathogen DNA with DNA-based fluorescence nanobarcodes
-
Li Y, Cu YTH, Luo D. Multiplexed detection of pathogen DNA with DNA-based fluorescence nanobarcodes. Nat. Biotech. 23, 885-889 (2005).
-
(2005)
Nat. Biotech.
, vol.23
, pp. 885-889
-
-
Li, Y.1
Cu, Y.T.H.2
Luo, D.3
-
8
-
-
49149122934
-
Chip-NMR biosensor for detection and molecular analysis of cells
-
Lee H, Sun E, Ham D, Weissleder R. Chip-NMR biosensor for detection and molecular analysis of cells. Nat. Med. 14(8), 869-874 (2008).
-
(2008)
Nat. Med
, vol.14
, Issue.8
, pp. 869-874
-
-
Lee, H.1
Sun, E.2
Ham, D.3
Weissleder, R.4
-
9
-
-
7444239628
-
Multipathogen oligonucleotide microarray for environmental and biodefense applications
-
Sergeev N, Distler M, Courtney S, SufianF. Multipathogen oligonucleotide microarray for environmental and biodefense applications. Biosens. Bioelectron. 20(4), 684-698 (2004).
-
(2004)
Biosens. Bioelectron
, vol.20
, Issue.4
, pp. 684-698
-
-
Sergeev, N.1
Distler, M.2
Courtney, S.3
Sufian, F.4
-
10
-
-
48149109780
-
Microarray detection of food-borne pathogens using specific probes prepared by comparative genomics
-
Kim HJ, Park SH, Lee TH, Nahm BH, Kim YR, Kim YH. Microarray detection of food-borne pathogens using specific probes prepared by comparative genomics. Biosens. Bioelectron. 24(2), 238-246 (2008).
-
(2008)
Biosens. Bioelectron
, vol.24
, Issue.2
, pp. 238-246
-
-
Kim, H.J.1
Park, S.H.2
Lee, T.H.3
Nahm, B.H.4
Kim, Y.R.5
Kim, Y.H.6
-
11
-
-
29144443541
-
Development and evaluation of a highly sensitive human papillomavirus genotyping DNA chip
-
Kim KH, Yoon MS, Na YJ, Park CS, Oh MR, Moon WC. Development and evaluation of a highly sensitive human papillomavirus genotyping DNA chip. Gynecol. Oncol. 100(1), 38-43 (2006).
-
(2006)
Gynecol. Oncol
, vol.100
, Issue.1
, pp. 38-43
-
-
Kim, K.H.1
Yoon, M.S.2
Na, Y.J.3
Park, C.S.4
Oh, M.R.5
Moon, W.C.6
-
12
-
-
34547599988
-
Development and application of an oligonucleotide microarray for the detection of food-borne bacterial pathogens
-
Wang XW, Zhang L, Jin LQ et al. Development and application of an oligonucleotide microarray for the detection of food-borne bacterial pathogens. Appl. Microbiol. Biotechnol. 76(1), 225-233 (2007).
-
(2007)
Appl. Microbiol. Biotechnol
, vol.76
, Issue.1
, pp. 225-233
-
-
Wang, X.W.1
Zhang, L.2
Jin, L.Q.3
-
13
-
-
41549140097
-
Identification of upper respiratory tract pathogens using electrochemical detection on an oligonucleotide microarray
-
Lodes MJ, Suciu D, Wilmoth JL et al. Identification of upper respiratory tract pathogens using electrochemical detection on an oligonucleotide microarray. PLoS ONE 2(9), e924 (2007).
-
(2007)
PLoS ONE
, vol.2
, Issue.9
-
-
Lodes, M.J.1
Suciu, D.2
Wilmoth, J.L.3
-
14
-
-
39849103686
-
Development of a photodiode array biochip using a bipolar semiconductor and its application to detection of human papilloma virus
-
Baek TJ, Park PY, Han KN, Kwon HT, Seong GH. Development of a photodiode array biochip using a bipolar semiconductor and its application to detection of human papilloma virus. Anal. Bioanal. Chem. 390(5), 1373-1378 (2008).
-
(2008)
Anal. Bioanal. Chem.
, vol.390
, Issue.5
, pp. 1373-1378
-
-
Baek, T.J.1
Park, P.Y.2
Han, K.N.3
Kwon, H.T.4
Seong, G.H.5
-
15
-
-
49149122934
-
Chip-NMR biosensor for detection and molecular analysis of cells
-
Lee H, Sun E, Ham D, Weissleder R. Chip-NMR biosensor for detection and molecular analysis of cells. Nat. Med. 14(8), 869-874 (2008).
-
(2008)
Nat. Med
, vol.14
, Issue.8
, pp. 869-874
-
-
Lee, H.1
Sun, E.2
Ham, D.3
Weissleder, R.4
-
16
-
-
66149108011
-
Microarray of DNA-protein complexes on poly-3-hydroxybutyrate surface for pathogen detection
-
Park TJ, Yoo SM, Keum KC, Lee SY. Microarray of DNA-protein complexes on poly-3-hydroxybutyrate surface for pathogen detection. Anal. Bioanal. Chem. 393, 1639-1647 (2009).
-
(2009)
Anal. Bioanal. Chem
, vol.393
, pp. 1639-1647
-
-
Park, T.J.1
Yoo, S.M.2
Keum, K.C.3
Lee, S.Y.4
-
17
-
-
33845447405
-
A molecular beacon DNA microarray system for rapid detection of E. coli O157:H7 that eliminates the risk of a false negative signal
-
Kim H, Kane MD, Kim S, Dominguez W, Applegate BM, Savikhin S. A molecular beacon DNA microarray system for rapid detection of E. coli O157:H7 that eliminates the risk of a false negative signal. Biosens. Bioelectron. 22, 1041-1047 (2007).
-
(2007)
Biosens. Bioelectron
, vol.22
, pp. 1041-1047
-
-
Kim, H.1
Kane, M.D.2
Kim, S.3
Dominguez, W.4
Applegate, B.M.5
Savikhin, S.6
-
18
-
-
33746216159
-
Identification and characterization of bacterial pathogens causing bloodstream infections by DNA microarray
-
Cleven BE, Palka-Santini M, Gielen J, Meembor S, Krönke M, Krut O. Identification and characterization of bacterial pathogens causing bloodstream infections by DNA microarray. J. Clin. Microbiol. 44(7), 2389-2397 (2006).
-
(2006)
J. Clin. Microbiol
, vol.44
, Issue.7
, pp. 2389-2397
-
-
Cleven, B.E.1
Palka-Santini, M.2
Gielen, J.3
Meembor, S.4
Krönke, M.5
Krut, O.6
-
19
-
-
34848838870
-
Identification of human pathogens isolated from blood using microarray hybridisation and signal pattern recognition
-
Wiesinger-Mayr H, Vierlinger K, Pichler R et al. Identification of human pathogens isolated from blood using microarray hybridisation and signal pattern recognition. BMC Microbiol. 7, 78 (2007).
-
(2007)
BMC Microbiol
, vol.7
, pp. 78
-
-
Wiesinger-Mayr, H.1
Vierlinger, K.2
Pichler, R.3
-
20
-
-
73449112244
-
Microarray-based identification of bacterial and fungal pathogens in bloodstream infections
-
Yoo SM, Choi JY, Yun JK et al. Microarray-based identification of bacterial and fungal pathogens in bloodstream infections. Mol. Cell. Probes 24(1), 44-52 (2010).
-
(2010)
Mol. Cell. Probes
, vol.24
, Issue.1
, pp. 44-52
-
-
Yoo, S.M.1
Choi, J.Y.2
Yun, J.K.3
-
21
-
-
70349110530
-
Rapid identification of bacterial pathogens using a PCR- and microarray-based assay
-
Järvinen AK, Laakso S, Piiparinen P et al. Rapid identification of bacterial pathogens using a PCR- and microarray-based assay. BMC Microbiol. 9, 161 (2009).
-
(2009)
BMC Microbiol
, vol.9
, pp. 161
-
-
Järvinen, A.K.1
Laakso, S.2
Piiparinen, P.3
-
22
-
-
67349208513
-
High-throughput detection of clinically important bacterial pathogens using DNA microarray
-
Yoo SM, Lee SY, Chang KH et al. High-throughput detection of clinically important bacterial pathogens using DNA microarray. Mol. Cell. Probes 23(3-4), 171-177 (2009).
-
(2009)
Mol. Cell. Probes
, vol.23
, Issue.3-4
, pp. 171-177
-
-
Yoo, S.M.1
Lee, S.Y.2
Chang, K.H.3
-
24
-
-
32844461332
-
DNA microarray-based detection of nosocomial pathogenic Pseudomonas aeruginosa and Acinetobacter baumannii
-
Keum KC, Yoo SM, Lee SY et al. DNA microarray-based detection of nosocomial pathogenic Pseudomonas aeruginosa and Acinetobacter baumannii. Mol. Cell. Probes 20(1), 42-50 (2006).
-
(2006)
Mol. Cell. Probes
, vol.20
, Issue.1
, pp. 42-50
-
-
Keum, K.C.1
Yoo, S.M.2
Lee, S.Y.3
-
25
-
-
27144530664
-
Generation of subspecies level-specific microbial diagnostic microarrays using genes amplified from subtractive suppression hybridization as microarray probes
-
Bae JW, Rhee SK, Nam YD, Park YH. Generation of subspecies level-specific microbial diagnostic microarrays using genes amplified from subtractive suppression hybridization as microarray probes. Nucleic Acids Res. 33(13), e113 (2005).
-
(2005)
Nucleic Acids Res
, vol.33
, Issue.13
-
-
Bae, J.W.1
Rhee, S.K.2
Nam, Y.D.3
Park, Y.H.4
-
26
-
-
61449193503
-
Large scale multiplex PCR improves pathogen detection by DNA microarrays
-
Palka-Santini M, Cleven BE, Eichinger L, Krönke M, Krut O. Large scale multiplex PCR improves pathogen detection by DNA microarrays. BMC Microbiol. 9, 1 (2009).
-
(2009)
BMC Microbiol
, vol.9
, pp. 1
-
-
Palka-Santini, M.1
Cleven, B.E.2
Eichinger, L.3
Krönke, M.4
Krut, O.5
-
27
-
-
76449116953
-
Resequencing microarray for detection of human adenoviruses in patients with conjunctivitis
-
Woo PC, Lau SK, Choi GK et al. Resequencing microarray for detection of human adenoviruses in patients with conjunctivitis. J. Clin. Virol. 47(3), 282-285 (2010).
-
(2010)
J. Clin. Virol
, vol.47
, Issue.13
, pp. 282-285
-
-
Woo, P.C.1
Lau, S.K.2
Choi, G.K.3
-
28
-
-
53249142137
-
Rapid detection of pathogens in blood culture bottles by real-time PCR in conjunction with the pre-analytic tool MolYsis
-
Gebert S, Siegel D, Wellinghausen N. Rapid detection of pathogens in blood culture bottles by real-time PCR in conjunction with the pre-analytic tool MolYsis. J Infect. 57(4), 307-316 (2008).
-
(2008)
J Infect.
, vol.57
, Issue.4
, pp. 307-316
-
-
Gebert, S.1
Siegel, D.2
Wellinghausen, N.3
-
29
-
-
33646148724
-
Use of real-time quantitative polymerase chain reaction to monitor the evolution of Brucella melitensis DNA load during therapy and posttherapy follow-up in patients with brucellosis
-
Navarro E, Segura JC, Castano MJ, Solera J. Use of real-time quantitative polymerase chain reaction to monitor the evolution of Brucella melitensis DNA load during therapy and posttherapy follow-up in patients with brucellosis. Clin. Infect. Dis. 42, 1266-1273 (2006).
-
(2006)
Clin. Infect. Dis.
, vol.42
, pp. 1266-1273
-
-
Navarro, E.1
Segura, J.C.2
Castano, M.J.3
Solera, J.4
-
30
-
-
2442673171
-
Nucleic acid amplification strategies for DNA microarray-based pathogen detection
-
Vora JG, Meador EC, Stenger AD, Andreadis DJ. Nucleic acid amplification strategies for DNA microarray-based pathogen detection. Appl. Environ. Microbiol. 70(5), 3047-3054 (2004).
-
(2004)
Appl. Environ. Microbiol.
, vol.70
, Issue.5
, pp. 3047-3054
-
-
Vora, J.G.1
Meador, E.C.2
Stenger, A.D.3
Andreadis, D.J.4
-
31
-
-
0037401053
-
Towards a unified system for detecting waterborne pathogens
-
Straub TM, Chandler DP. Towards a unified system for detecting waterborne pathogens. J. Microbiol. Methods 53, 185-197 (2003).
-
(2003)
J. Microbiol. Methods
, vol.53
, pp. 185-197
-
-
Straub, T.M.1
Chandler, D.P.2
-
32
-
-
26644442951
-
Optimization of microbial DNA extraction and purification from raw wastewater samples for downstream pathogen detection by microarrays
-
Lemarchand K, Berthiaume F, Maynard C et al. Optimization of microbial DNA extraction and purification from raw wastewater samples for downstream pathogen detection by microarrays. J. Microbiol. Methods 63(2), 115-126 (2005).
-
(2005)
J. Microbiol. Methods
, vol.63
, Issue.2
, pp. 115-126
-
-
Lemarchand, K.1
Berthiaume, F.2
Maynard, C.3
-
33
-
-
0036841729
-
Optimal DNA isolation method for detection of bacteria in clinical specimens by broad-range PCR
-
Rantakokko-Jalava K, Jalava J. Optimal DNA isolation method for detection of bacteria in clinical specimens by broad-range PCR. J. Clin. Microbiol. 40(11), 4211-4217 (2002).
-
(2002)
J. Clin. Microbiol
, vol.40
, Issue.11
, pp. 4211-4217
-
-
Rantakokko-Jalava, K.1
Jalava, J.2
-
34
-
-
33745509562
-
Microchip-based one step DNA extraction and real-time PCR in one chamber for rapid pathogen identification
-
Lee JG, Cheong KH, Huh N, Kim S, Choi JW, Ko C. Microchip-based one step DNA extraction and real-time PCR in one chamber for rapid pathogen identification. Lab. Chip 6(7), 886-895 (2006).
-
(2006)
Lab. Chip
, vol.6
, Issue.7
, pp. 886-895
-
-
Lee, J.G.1
Cheong, K.H.2
Huh, N.3
Kim, S.4
Choi, J.W.5
Ko, C.6
-
35
-
-
70349316145
-
Cell lysis and DNA extraction of Gram-positive and Gram-negative bacteria from whole blood in a disposable microfluidic chip
-
Mahalanabis M, Al-Muayad H, Kulinski MD, Altman D, Klapperich CM. Cell lysis and DNA extraction of Gram-positive and Gram-negative bacteria from whole blood in a disposable microfluidic chip. Lab Chip 9(19), 2811-2817 (2009).
-
(2009)
Lab Chip
, vol.9
, Issue.19
, pp. 2811-2817
-
-
Mahalanabis, M.1
Al-Muayad, H.2
Kulinski, M.D.3
Altman, D.4
Klapperich, C.M.5
-
36
-
-
70349303094
-
Low cost and manufacturable complete microTAS for detecting bacteria
-
Sauer-Budge AF, Mirer P, Chatterjee A, Klapperich CM, Chargin D, Sharon A. Low cost and manufacturable complete microTAS for detecting bacteria. Lab Chip 9(19), 2803-2810 (2009).
-
(2009)
Lab Chip
, vol.9
, Issue.19
, pp. 2803-2810
-
-
Sauer-Budge, A.F.1
Mirer, P.2
Chatterjee, A.3
Klapperich, C.M.4
Chargin, D.5
Sharon, A.6
|