Hepatitis B virus: Origin and evolution

Journal of Viral Hepatitis

Volumn 17, Issue 4, 2010, Pages 229-235

  Jazayeri, S M ^a   Alavian, S M ^b   Carman, W F ^c  

^a TEHRAN UNIVERSITY OF MEDICAL SCIENCES   (Iran)

^b BAQIYATALLAH UNIVERSITY OF MEDICAL SCIENCES   (Iran)

^c West of Scotland Specialist Virology Laboratory Gartnavel   (United Kingdom)

Author keywords

HBV genotypes; HBV origin; Hepatitis B virus evolution

Indexed keywords

GENOTYPE; GEOGRAPHIC DISTRIBUTION; HEPATITIS B; HEPATITIS B VIRUS; MOLECULAR EVOLUTION; NONHUMAN; PRIORITY JOURNAL; REVIEW; VIRAL GENETICS; VIRUS CELL INTERACTION; VIRUS MUTATION;

EVOLUTION, MOLECULAR; GENOTYPE; HEPATITIS B VIRUS; HUMANS; POLYMORPHISM, GENETIC; VIRUS REPLICATION;

EID: 77950280936     PISSN: 13520504     EISSN: 13652893     Source Type: Journal    
DOI: 10.1111/j.1365-2893.2009.01193.x     Document Type: Review

References (47)

1. Holland J, Domingo E. Origin and evolution of viruses. Virus Genes 1998 16 : 13 21.
2. Carman WF. Infection associated with medical intervention: hepatitis viruses and HGV. Br Med Bull 1998 54 (3 731 748.
3. Mizokami M, Orito E. Molecular evolution of hepatitis viruses. Nippon Shokakibyo Gakkai Zasshi 1999 96 : 1033 1043. (Pubitemid 29462739)
4. Kidd-Ljunggren K, Simonsen O. Reappearance of hepatitis B 10 years after kidney transplantation. N Engl J Med 1999 341 : 127 128.
5. Morozov V, Pisareva M, Groudinin M. Homologous recombination between different genotypes of hepatitis B virus. Gene 2000 260 : 55 65.
6. Torresi J. The virological and clinical significance of mutations in the overlapping envelope and polymerase genes of hepatitis B virus. J Clin Virol 2002 25 : 97 106.
7. Sugauchi F, Orito E, Ichida T et al. Hepatitis B virus of genotype B with or without recombination with genotype C over the precore region plus the core gene. J Virol 2002 76 : 5985 5992.
8. Carman WF. Molecular variants of hepatitis B virus. Clin Lab Med 1996 16 : 407 428.
9. Yang Z, Lauder IJ, Lin HJ. Molecular evolution of the hepatitis B virus genome. J Mol Evol 1995 41 : 587 596.
10. Orito E, Mizokami M, Ina Y et al. Host-independent evolution and a genetic classification of the hepadnavirus family based on nucleotide sequences. Proc Natl Acad Sci USA 1989 86 : 7059 7062.
11. Kodama K, Ogasawara N, Yoshikawa H, Murakami S. Nucleotide sequence of a cloned woodchuck hepatitis virus genome: evolutional relationship between hepadnaviruses. J Virol 1985 56 : 978 986.
12. Domingo E, Mas A, Yuste E et al. Virus population dynamics, fitness variations and the control of viral disease: an update. Prog Drug Res 2001 57 : 77 115.
13. Miller RH, Robinson WS. Common evolutionary origin of hepatitis B virus and retroviruses. Proc Natl Acad Sci USA 1986 83 : 2531 2535.
14. Okamoto H, Imai M, Kametani M, Nakamura T, Mayumi M. Genomic heterogeneity of hepatitis B virus in a 54-year-old woman who contracted the infection through materno-fetal transmission. Jpn J Exp Med 1987 57 : 231 236.
15. Hannoun C, Horal P, Lindh M. Long-term mutation rates in the hepatitis B virus genome. J Gen Virol 2000 81 : 75 83.
16. Carman WF. Molecular variants of hepatitis B virus. Clin Lab Med 1996 16 : 407 428.
17. Wilson JN, Nokes DJ, Carman WF. The predicted pattern of emergence of vaccine-resistant hepatitis B: a cause for concern? Vaccine 1999 17 : 973 978.
18. Carman W, Thomas H, Domingo E. Viral genetic variation: hepatitis B virus as a clinical example. Lancet 1993 341 : 349 353.
19. Lenhoff RJ, Luscombe CA, Summers J. Competition in vivo between a cytopathic variant and a wild-type duck hepatitis B virus. Virol 1998 251 : 85 95.
20. Bartholomeusz A, Locarnini S. Hepatitis B virus mutants and fulminant hepatitis B: fitness plus phenotype. Hepatology 2001 34 : 432 435.
21. Liu CJ, Kao JH, Shau WY, Chen PJ, Lai MY, Chen DS. Naturally occurring hepatitis B surface gene variants in chronic hepatitis B virus infection: correlation with viral serotypes and clinical stages of liver disease. J Med Virol 2002 68 : 50 59.
22. Gunther S, Fischer L, Pult I, Sterneck M, Will H. Naturally occurring variants of hepatitis B virus. Adv Virus Res 1999 52 : 25 137.
23. Carman WF, Thomas HC, Zuckerman AJ, Harrison TJ. Molecular Variants. Hong Kong : Churchill Livingston, 1998.
24. Carman WF. Variation in the core and X genes of hepatitis B virus. Intervirology 1995 38 : 75 88.
25. Okumura A, Takayanagi M, Aiyama T et al. Serial analysis of hepatitis B virus core nucleotide sequence of patients with acute exacerbation during chronic infection. J Med Virol 1996 49 : 103 109.
26. Bozkaya H, Ayola B, Lok AS. High rate of mutations in the hepatitis B core gene during the immune clearance phase of chronic hepatitis B virus infection. Hepatology 1996 24 : 32 37.
27. Bozkaya H, Akarca US, Ayola B, Lok AS. High degree of conservation in the hepatitis B virus core gene during the immune tolerant phase in perinatally acquired chronic hepatitis B virus infection. J Hepatol 1997 26 : 508 516.
28. Carman WF, Jacyna MR, Hadziyannis S et al. Mutation preventing formation of hepatitis B e antigen in patients with chronic hepatitis B infection. Lancet 1989 2 : 588 591.
29. Abdelhamed AM, Kelley CM, Miller TG, Furman PA, Isom HC. Rebound of hepatitis B virus replication in HepG2 cells after cessation of antiviral treatment. J Virol 2002 76 : 8148 8160.
30. Cho SW, Hahm KB, Kim JH. Reversion from pre core/core promoter mutants to wild type HBV during the course of lamivudine therapy. Hepatology 2000 32 : 1163 1169.
31. Suzuki F, Suzuki Y, Tsubota A et al. Mutations of polymerase, precore and core promoter gene in hepatitis B virus during 5-year lamivudine therapy. J Hepatol 2002 37 : 824 830.
32. MacDonald DM, Holmes EC, Lewis JC, Simmonds P. Detection of hepatitis B virus infection in wild-born chimpanzees (Pan troglodytes verus): phylogenetic relationships with human and other primate genotypes. J Virol 2000 74 : 4253 4257.
33. Lanford RE, Chavez D, Brasky KM, Burns III. RB, Rico-Hesse R. Isolation of a hepadnavirus from the woolly monkey, a New World primate. Proc Natl Acad Sci USA 1998 95 : 5757 5761.
34. Warren KS, Heeney JL, Swan RA, Heriyanto, Verschoor EJ. A new group of hepadnaviruses naturally infecting orangutans (Pongo pygmaeus). J Virol 1999 73 : 7860 7865.
35. Simmonds P. Reconstructing the origins of human hepatitis viruses. Philos Trans R Soc Lond B Biol Sci 2001 356 : 1013 1026.
36. Starkman SE, MacDonald DM, Lewis JC, Holmes EC, Simmonds P. Geographic and species association of hepatitis B virus genotypes in non-human primates. Virol 2003 314 : 381 393.
37. Norder H, Ebert JW, Fields HA, Mushahwar IK, Magnius LO. Complete sequencing of a gibbon hepatitis B virus genome reveals a unique genotype distantly related to the chimpanzee hepatitis B virus. Virol 1996 218 : 214 223.
38. Norder H, Courouce AM, Magnius LO. Complete genomes, phylogenetic relatedness, and structural proteins of six strains of the hepatitis B virus, four of which represent two new genotypes. Virol 1994 198 : 489 503.
39. Magnius LO, Norder H. Subtypes, genotypes and molecular epidemiology of the hepatitis B virus as reflected by sequence variability of the S-gene. Intervirology 1995 38 : 24 34.
40. Simmonds P. The origin and evolution of hepatitis viruses in humans. J Gen Virol 2001 82 : 693 712.
41. Bollyky PL, Holmes EC. Reconstructing the complex evolutionary history of hepatitis B virus. J Mol Evol 1999 49 : 130 141.
42. Takahashi K, Brotman B, Usuda S, Mishiro S, Prince AM. Full-genome sequence analyses of hepatitis B virus (HBV) strains recovered from chimpanzees infected in the wild: implications for an origin of HBV. Virol 2000 267 : 58 64.
43. Robertson BH. Viral hepatitis and primates: historical and molecular analysis of human and nonhuman primate hepatitis A, B, and the GB-related viruses. J Viral Hepat 2001 8 : 233 242.
44. Lindh M, Hannoun C, Dhillon AP, Norkrans G, Horal P. Core promoter mutations and genotypes in relation to viral replication and liver damage in East Asian hepatitis B virus carriers. J Infect Dis 1999 179 : 775 782.
45. Blackberg J, Kidd-Ljunggren K. Occult hepatitis B virus after acute self-limited infection persisting for 30 years without sequence variation. J Hepatol 2000 33 : 992 997.
46. McMahon BJ, Lanier AP, Wainwright RB. Hepatitis B and hepatocellular carcinoma in Eskimo/Inuit population. Int J Circumpolar Health 1998 57 (Suppl. 1 414 419. (Review).
47. Jazayeri MS, Basuni AA, Cooksley G, Locarnini S, Carman WF. Hepatitis B virus genotypes, core gene variability and ethnicity in the Pacific region. J Hepatol 2004 41 (1 139 146.