-
1
-
-
42549127763
-
Identification of Wap65, a human homologue of hemopexin as a copper-inducible gene in swordtail fish, Xiphophorus helleri
-
Aliza D., Ismail I.S., Kuah M.K., Shu-Chien A.C., and Tengku Muhammad T.S. Identification of Wap65, a human homologue of hemopexin as a copper-inducible gene in swordtail fish, Xiphophorus helleri. Fish Physiol. Biochem. 34 (2008) 129-138
-
(2008)
Fish Physiol. Biochem.
, vol.34
, pp. 129-138
-
-
Aliza, D.1
Ismail, I.S.2
Kuah, M.K.3
Shu-Chien, A.C.4
Tengku Muhammad, T.S.5
-
2
-
-
59349103965
-
Molecular characterisation and structural analysis of an interferon homologue in sea bass (Dicentrarchus labrax L.)
-
Casani D., Randelli E., Costantini S., Facchiano A.M., Zou J., Martin S., Secombes C.J., Scapigliati G., and Buonocore F. Molecular characterisation and structural analysis of an interferon homologue in sea bass (Dicentrarchus labrax L.). Mol. Immunol. 46 (2009) 943-952
-
(2009)
Mol. Immunol.
, vol.46
, pp. 943-952
-
-
Casani, D.1
Randelli, E.2
Costantini, S.3
Facchiano, A.M.4
Zou, J.5
Martin, S.6
Secombes, C.J.7
Scapigliati, G.8
Buonocore, F.9
-
3
-
-
0003504160
-
Contribution a la connaissance de la biologie et de I'elevage de 6 Sparidis Mediterraneens:Sparus aurata, Diplodus sargus, Diplodus vulgaris, Diplodus annularis. Lithognathus mormyrus, Puntazzo puntazzo (Poissons Teleosteens)
-
Divanach, P., 1985. Contribution a la connaissance de la biologie et de I'elevage de 6 Sparidis Mediterraneens:Sparus aurata, Diplodus sargus, Diplodus vulgaris, Diplodus annularis. Lithognathus mormyrus, Puntazzo puntazzo (Poissons Teleosteens). Doctoral d" Etai rUniversitiJ des Sciences el Techniques du Languedoc Montpellier, p. 479.
-
(1985)
Doctoral d
, pp. 479
-
-
Divanach, P.1
-
4
-
-
43149108592
-
Dynamic expression of immune response genes in the sea bass, Dicentrarchus labrax, experimentally infected with the monogenean Diplectanum aequans
-
Faliex E., Da Silva C., Simon G., and Sasal P. Dynamic expression of immune response genes in the sea bass, Dicentrarchus labrax, experimentally infected with the monogenean Diplectanum aequans. Fish Shellfish Immunol. 24 (2008) 759-767
-
(2008)
Fish Shellfish Immunol.
, vol.24
, pp. 759-767
-
-
Faliex, E.1
Da Silva, C.2
Simon, G.3
Sasal, P.4
-
5
-
-
0242578620
-
A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood
-
Guindon S., and Gascuel O. A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood. Sys. Biol. 52 5 (2003) 696-704
-
(2003)
Sys. Biol.
, vol.52
, Issue.5
, pp. 696-704
-
-
Guindon, S.1
Gascuel, O.2
-
6
-
-
23144433822
-
PHYML Online -- a web server for fast maximum likelihood-based phylogenetic inference
-
Guindon S., Lethiec F., Duroux P., and Gascuel O. PHYML Online -- a web server for fast maximum likelihood-based phylogenetic inference. Nuc. Acid Res. 33 Web Server issue (2005) W557-W559
-
(2005)
Nuc. Acid Res.
, vol.33
, Issue.Web Server issue
-
-
Guindon, S.1
Lethiec, F.2
Duroux, P.3
Gascuel, O.4
-
7
-
-
0002051540
-
BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT
-
Hall T.A. BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucl. Acids Symp. Ser. 41 (1999) 95-98
-
(1999)
Nucl. Acids Symp. Ser.
, vol.41
, pp. 95-98
-
-
Hall, T.A.1
-
8
-
-
0042817947
-
Functional and structural analyses of cryptochrome. Vertebrate CRY regions responsible for interaction with the CLOCK:BMAL1 heterodimer and its nuclear localization
-
Hirayama J., Nakamura H., Ishikawa T., Kobayashi Y., and Todo T. Functional and structural analyses of cryptochrome. Vertebrate CRY regions responsible for interaction with the CLOCK:BMAL1 heterodimer and its nuclear localization. J. Biol. Chem. 278 (2003) 35620-35628
-
(2003)
J. Biol. Chem.
, vol.278
, pp. 35620-35628
-
-
Hirayama, J.1
Nakamura, H.2
Ishikawa, T.3
Kobayashi, Y.4
Todo, T.5
-
9
-
-
2342478624
-
The occurrence of two types of hemopexin-like protein in medaka and differences in their affinity to heme
-
Hirayama M., Kobiyama A., Kinoshita S., and Watabe S. The occurrence of two types of hemopexin-like protein in medaka and differences in their affinity to heme. J. Exp. Biol. 207 (2004) 1387-1398
-
(2004)
J. Exp. Biol.
, vol.207
, pp. 1387-1398
-
-
Hirayama, M.1
Kobiyama, A.2
Kinoshita, S.3
Watabe, S.4
-
10
-
-
21344471138
-
Real-time RT-PCR normalisation; strategies and considerations
-
Huggett J., Dheda K., Bustin S., and Zumla A. Real-time RT-PCR normalisation; strategies and considerations. Genes Immun. 6 (2005) 279-284
-
(2005)
Genes Immun.
, vol.6
, pp. 279-284
-
-
Huggett, J.1
Dheda, K.2
Bustin, S.3
Zumla, A.4
-
11
-
-
0027386243
-
The zebrafish midblastula transition
-
Kane D., and Kimmel C. The zebrafish midblastula transition. Development 119 2 (1993) 447-456
-
(1993)
Development
, vol.119
, Issue.2
, pp. 447-456
-
-
Kane, D.1
Kimmel, C.2
-
12
-
-
0000172623
-
The 65-kDa cytosolic protein associated with warm temperature acclimation in goldfish, Carassius auratus
-
Kikuchi K., Watabe S., Suzuki Y., Aida K., and Nakajima H. The 65-kDa cytosolic protein associated with warm temperature acclimation in goldfish, Carassius auratus. J. Comp. Physiol. B 163 (1993) 349-354
-
(1993)
J. Comp. Physiol. B
, vol.163
, pp. 349-354
-
-
Kikuchi, K.1
Watabe, S.2
Suzuki, Y.3
Aida, K.4
Nakajima, H.5
-
13
-
-
0029126862
-
The warm temperature acclimation-related 65-kDa protein, Wap65, in goldfish and its gene expression
-
Kikuchi K., Yamashita M., Watabe S., and Aida K. The warm temperature acclimation-related 65-kDa protein, Wap65, in goldfish and its gene expression. J. Biol. Chem. 270 (1995) 17087-17092
-
(1995)
J. Biol. Chem.
, vol.270
, pp. 17087-17092
-
-
Kikuchi, K.1
Yamashita, M.2
Watabe, S.3
Aida, K.4
-
14
-
-
0031839796
-
Isolation of a 65-kDa protein from white muscle of warm temperature-acclimated goldfish (Carassius auratus)
-
Kikuchi K., Watabe S., and Aida K. Isolation of a 65-kDa protein from white muscle of warm temperature-acclimated goldfish (Carassius auratus). Comp. Biochem. Physiol. B Biochem. Mol. Biol. 120 (1998) 385-391
-
(1998)
Comp. Biochem. Physiol. B Biochem. Mol. Biol.
, vol.120
, pp. 385-391
-
-
Kikuchi, K.1
Watabe, S.2
Aida, K.3
-
15
-
-
0035710746
-
Analysis of relative gene expression data using real-time quantitative PCR and the 2(-Delta Delta C(T)) method
-
Livak K.J., and Schmittgen T.D. Analysis of relative gene expression data using real-time quantitative PCR and the 2(-Delta Delta C(T)) method. Methods 25 (2001) 402-408
-
(2001)
Methods
, vol.25
, pp. 402-408
-
-
Livak, K.J.1
Schmittgen, T.D.2
-
16
-
-
66949114543
-
-
Comp. Biochem. Physiol. B Biochem. Mol. Biol
-
Mitter, K., Kotoulas, G., Magoulas, A., Mulero, V., Sepulcre, P., Figueras, A., Novoa, B., Sarropoulou, E., 2009. Evaluation of candidate reference genes for QPCR during ontogenesis and of immune-relevant tissues of European seabass (Dicentrarchus labrax). Comp. Biochem. Physiol. B Biochem. Mol. Biol.
-
(2009)
Evaluation of candidate reference genes for QPCR during ontogenesis and of immune-relevant tissues of European seabass (Dicentrarchus labrax)
-
-
Mitter, K.1
Kotoulas, G.2
Magoulas, A.3
Mulero, V.4
Sepulcre, P.5
Figueras, A.6
Novoa, B.7
Sarropoulou, E.8
-
18
-
-
20444434028
-
Genomic sequences encoding two types of medaka hemopexin-like protein Wap65, and their gene expression profiles in embryos
-
Nakaniwa M., Hirayama M., Shimizu A., Sasaki T., Asakawa S., Shimizu N., and Watabe S. Genomic sequences encoding two types of medaka hemopexin-like protein Wap65, and their gene expression profiles in embryos. J. Exp. Biol. 208 (2005) 1915-1925
-
(2005)
J. Exp. Biol.
, vol.208
, pp. 1915-1925
-
-
Nakaniwa, M.1
Hirayama, M.2
Shimizu, A.3
Sasaki, T.4
Asakawa, S.5
Shimizu, N.6
Watabe, S.7
-
20
-
-
0032825215
-
Crystal structure of hemopexin reveals a novel high-affinity heme site formed between two beta-propeller domains
-
Paoli M., Anderson B.F., Baker H.M., Morgan W.T., Smith A., and Baker E.N. Crystal structure of hemopexin reveals a novel high-affinity heme site formed between two beta-propeller domains. Nat. Struct. Biol. 6 (1999) 926-931
-
(1999)
Nat. Struct. Biol.
, vol.6
, pp. 926-931
-
-
Paoli, M.1
Anderson, B.F.2
Baker, H.M.3
Morgan, W.T.4
Smith, A.5
Baker, E.N.6
-
21
-
-
34447252068
-
Expression analysis of the acute phase response in channel catfish (Ictalurus punctatus) after infection with a Gram-negative bacterium
-
Peatman E., Baoprasertkul P., Terhune J., Xu P., Nandi S., Kucuktas H., Li P., Wang S., Somridhivej B., Dunham R., and Liu Z. Expression analysis of the acute phase response in channel catfish (Ictalurus punctatus) after infection with a Gram-negative bacterium. Dev. Comp. Immunol. 31 (2007) 1183-1196
-
(2007)
Dev. Comp. Immunol.
, vol.31
, pp. 1183-1196
-
-
Peatman, E.1
Baoprasertkul, P.2
Terhune, J.3
Xu, P.4
Nandi, S.5
Kucuktas, H.6
Li, P.7
Wang, S.8
Somridhivej, B.9
Dunham, R.10
Liu, Z.11
-
22
-
-
34548356906
-
Microarray analysis of gene expression in the blue catfish liver reveals early activation of the MHC class I pathway after infection with Edwardsiella ictaluri
-
Peatman E., Terhune J., Baoprasertkul P., Xu P., Nandi S., Wang S., Somridhivej B., Kucuktas H., Li P., Dunham R., and Liu Z. Microarray analysis of gene expression in the blue catfish liver reveals early activation of the MHC class I pathway after infection with Edwardsiella ictaluri. Mol. Immunol. 45 (2008) 553-566
-
(2008)
Mol. Immunol.
, vol.45
, pp. 553-566
-
-
Peatman, E.1
Terhune, J.2
Baoprasertkul, P.3
Xu, P.4
Nandi, S.5
Wang, S.6
Somridhivej, B.7
Kucuktas, H.8
Li, P.9
Dunham, R.10
Liu, Z.11
-
23
-
-
0041386108
-
MRBAYES 3: Bayesian phylogenetic inference under mixed models
-
Ronquist F., and Huelsenbeck J.P. MRBAYES 3: Bayesian phylogenetic inference under mixed models. Bioinformatics 19 (2003) 1572-1574
-
(2003)
Bioinformatics
, vol.19
, pp. 1572-1574
-
-
Ronquist, F.1
Huelsenbeck, J.P.2
-
24
-
-
65449174874
-
Profiling of infection specific mRNA transcripts of the European seabass Dicentrarchus labrax
-
Sarropoulou E., Sepulcre P., Poisa-Beiro L., Mulero V., Meseguer J., Figueras A., Novoa B., Terzoglou V., Reinhardt R., Magoulas A., and Kotoulas G. Profiling of infection specific mRNA transcripts of the European seabass Dicentrarchus labrax. BMC Genomics 10 (2009) 157
-
(2009)
BMC Genomics
, vol.10
, pp. 157
-
-
Sarropoulou, E.1
Sepulcre, P.2
Poisa-Beiro, L.3
Mulero, V.4
Meseguer, J.5
Figueras, A.6
Novoa, B.7
Terzoglou, V.8
Reinhardt, R.9
Magoulas, A.10
Kotoulas, G.11
-
25
-
-
34249287368
-
Vibrio anguillarum evades the immune response of the bony fish sea bass (Dicentrarchus labrax L.) through the inhibition of leukocyte respiratory burst and down-regulation of apoptotic caspases
-
Sepulcre M.P., Sarropoulou E., Kotoulas G., Meseguer J., and Mulero V. Vibrio anguillarum evades the immune response of the bony fish sea bass (Dicentrarchus labrax L.) through the inhibition of leukocyte respiratory burst and down-regulation of apoptotic caspases. Mol. Immunol. 44 (2007) 3751-3757
-
(2007)
Mol. Immunol.
, vol.44
, pp. 3751-3757
-
-
Sepulcre, M.P.1
Sarropoulou, E.2
Kotoulas, G.3
Meseguer, J.4
Mulero, V.5
-
26
-
-
37449004986
-
The warm temperature acclimation protein Wap65 as an immune response gene, its duplicates are differentially regulated by temperature and bacterial infections
-
Sha Z., Xu P., Takano T., Liu H., Terhune J., and Liu Z. The warm temperature acclimation protein Wap65 as an immune response gene, its duplicates are differentially regulated by temperature and bacterial infections. Mol. Immunol. 45 (2008) 1458-1469
-
(2008)
Mol. Immunol.
, vol.45
, pp. 1458-1469
-
-
Sha, Z.1
Xu, P.2
Takano, T.3
Liu, H.4
Terhune, J.5
Liu, Z.6
-
27
-
-
73049088017
-
-
Mol. Biol. Rep
-
Shi, Y.H., Chen, J., Li, C.H., Li, M.Y., 2009. Molecular cloning of liver Wap65 cDNA in ayu (Plecoglossus altivelis) and mRNA expression changes following Listonella anguillarum infection. Mol. Biol. Rep.
-
(2009)
Molecular cloning of liver Wap65 cDNA in ayu (Plecoglossus altivelis) and mRNA expression changes following Listonella anguillarum infection
-
-
Shi, Y.H.1
Chen, J.2
Li, C.H.3
Li, M.Y.4
-
28
-
-
0028800024
-
Disruption of the murine homeobox gene Cdx1 affects axial skeletal identities by altering the mesodermal expression domains of Hox genes
-
Subramanian V., Meyer B.I., and Gruss P. Disruption of the murine homeobox gene Cdx1 affects axial skeletal identities by altering the mesodermal expression domains of Hox genes. Cell 83 (1995) 641-653
-
(1995)
Cell
, vol.83
, pp. 641-653
-
-
Subramanian, V.1
Meyer, B.I.2
Gruss, P.3
-
30
-
-
34547781750
-
MEGA4: molecular evolutionary genetics analysis (MEGA) software version 4.0
-
Tamura K., Dudley J., Nei M., and Kumar S. MEGA4: molecular evolutionary genetics analysis (MEGA) software version 4.0. Mol. Biol. Evolut. 24 (2007) 1596-1599
-
(2007)
Mol. Biol. Evolut.
, vol.24
, pp. 1596-1599
-
-
Tamura, K.1
Dudley, J.2
Nei, M.3
Kumar, S.4
-
31
-
-
0027968068
-
CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position specific gap penalties and weight matrix choice
-
Thompson J.D., Higgins D.G., and Gibson T.J. CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position specific gap penalties and weight matrix choice. Nucl. Acids Res. 22 (1994) 4673-4680
-
(1994)
Nucl. Acids Res.
, vol.22
, pp. 4673-4680
-
-
Thompson, J.D.1
Higgins, D.G.2
Gibson, T.J.3
-
32
-
-
0037129827
-
Accurate normalization of real-time quantitative RT-PCRdata by geometric averaging of multiple internal control genes
-
RESEARCH0034
-
Vandesompele, J., De Preter, K., Pattyn, F., Poppe, B.,Van Roy, N., De Paepe, A., Speleman, F., 2002. Accurate normalization of real-time quantitative RT-PCRdata by geometric averaging of multiple internal control genes. GenomeBiol. 3 RESEARCH0034.
-
(2002)
GenomeBiol
, vol.3
-
-
Vandesompele, J.1
De Preter, K.2
Pattyn, F.3
Poppe, B.4
Van Roy, N.5
De Paepe, A.6
Speleman, F.7
-
33
-
-
53349118112
-
Stage-specific gene expression during fish spermatogenesis as determined by laser-capture microdissection and quantitative-PCR in sea bass (Dicentrarchus labrax) gonads
-
Vinas J., and Piferrer F. Stage-specific gene expression during fish spermatogenesis as determined by laser-capture microdissection and quantitative-PCR in sea bass (Dicentrarchus labrax) gonads. Biol. Reprod. 79 (2008) 738-747
-
(2008)
Biol. Reprod.
, vol.79
, pp. 738-747
-
-
Vinas, J.1
Piferrer, F.2
-
34
-
-
0035745854
-
Temperature and myogenic factor transcript levels during early development determines muscle growth potential in rainbow trout (Oncorhynchus mykiss) and sea bass (Dicentrarchus labrax)
-
Wilkes D., Xie S.Q., Stickland N.C., Alami-Durante H., Kentouri M., Sterioti A., Koumoundouros G., Fauconneau B., and Goldspink G. Temperature and myogenic factor transcript levels during early development determines muscle growth potential in rainbow trout (Oncorhynchus mykiss) and sea bass (Dicentrarchus labrax). J. Exp. Biol. 204 (2001) 2763-2771
-
(2001)
J. Exp. Biol.
, vol.204
, pp. 2763-2771
-
-
Wilkes, D.1
Xie, S.Q.2
Stickland, N.C.3
Alami-Durante, H.4
Kentouri, M.5
Sterioti, A.6
Koumoundouros, G.7
Fauconneau, B.8
Goldspink, G.9
-
35
-
-
0034097381
-
Codon-substitution models for heterogeneous selection pressure at amino acid sites
-
Yang Z.H., Nielsen R., Goldman N., and Pedersen A.M.K. Codon-substitution models for heterogeneous selection pressure at amino acid sites. Genetics 155 (2000) 431-449
-
(2000)
Genetics
, vol.155
, pp. 431-449
-
-
Yang, Z.H.1
Nielsen, R.2
Goldman, N.3
Pedersen, A.M.K.4
-
36
-
-
27644482283
-
Comprehensive algorithm for quantitative real-time polymerase chain reaction
-
Zhao S., and Fernald R.D. Comprehensive algorithm for quantitative real-time polymerase chain reaction. J. Comput. Biol. 12 (2005) 1047-1064
-
(2005)
J. Comput. Biol.
, vol.12
, pp. 1047-1064
-
-
Zhao, S.1
Fernald, R.D.2
|