Genomic sequences encoding two types of medaka hemopexin-like protein Wap65, and their gene expression profiles in embryos

Journal of Experimental Biology

Volumn 208, Issue 10, 2005, Pages 1915-1925

  Nakaniwa, Makiko ^a   Hirayama, Makoto ^a   Shimizu, Atsushi ^b   Sasaki, Takashi ^b   Asakawa, Shuichi ^b   Shimizu, Nobuyoshi ^b   Watabe, Shugo ^a  

^a UNIVERSITY OF TOKYO   (Japan)

^b KEIO UNIVERSITY   (Japan)

Author keywords

Embryo; Gene expression; Genomic sequences; Hemopexin; Medaka; mWap65 1; mWap65 2; Oryzias latipes; Transgenic fish

Indexed keywords

GREEN FLUORESCENT PROTEIN; HEMOPEXIN; PRIMER DNA;

ANIMAL; ANIMAL EMBRYO; ARTICLE; BACTERIAL ARTIFICIAL CHROMOSOME; COMPARATIVE STUDY; DNA SEQUENCE; GENE EXPRESSION PROFILING; GENE EXPRESSION REGULATION; GENE STRUCTURE; GENETIC VARIABILITY; GENETICS; IN SITU HYBRIDIZATION; METABOLISM; MOLECULAR GENETICS; NUCLEOTIDE SEQUENCE; ORYZIAS; PLASMID; PRENATAL DEVELOPMENT; PROMOTER REGION; REVERSE TRANSCRIPTION POLYMERASE CHAIN REACTION;

ANIMALS; BASE SEQUENCE; CHROMOSOMES, ARTIFICIAL, BACTERIAL; DNA PRIMERS; EMBRYO, NONMAMMALIAN; GENE COMPONENTS; GENE EXPRESSION PROFILING; GENE EXPRESSION REGULATION, DEVELOPMENTAL; GREEN FLUORESCENT PROTEINS; HEMOPEXIN; IN SITU HYBRIDIZATION; MOLECULAR SEQUENCE DATA; ORYZIAS; PLASMIDS; PROMOTER REGIONS (GENETICS); REVERSE TRANSCRIPTASE POLYMERASE CHAIN REACTION; SEQUENCE ANALYSIS, DNA; VARIATION (GENETICS);

LATIPES; ORYZIAS; ORYZIAS LATIPES;

EID: 20444434028     PISSN: 00220949     EISSN: None     Source Type: Journal    
DOI: 10.1242/jeb.01570     Document Type: Article

References (33)

1. Akimenko M. A., Johnson, S. L., Westerfield, M. and Ekker, M. (1995). Differential induction of four msx homeobox genes during fin development and regeneration in zebrafish. Development 121, 347-357.
2. Altruda, F., Poli, V., Restagno, G., Argos, P., Cortese, R. and Silengo, L. (1985). The primary structure of human hemopexin deduced from cDNA sequence: evidence for internal, repeating homology. Nucleic Acids Res. 13, 3841-3859.
3. Bodmer, R., Jan, L. Y. and Jan, Y. N. (1990). A new homeobox-containing gene, msh-2, is transiently expressed early during mesoderm formation in Drosophila. Development 110, 661-669.
4. Chou, C. Y., Horng, L. S. and Tsai, H. J. (2001). Uniform GFP-expression in transgenic medaka (Oryzias latipes) at the F0 generation. Transgenic Res. 10, 303-315.
5. Gong, Z., Ju, B. and Wan, H. (2001). Green fluorescent protein (GFP) transgenic fish and their applications. Genetica 111, 213-225.
6. Grieninger, G., Liang, T. J., Beuving, G., Goldfarb, V., Metcalfe, S. A. and Muller-Eberhard, U. (1986). Hemopexin is a developmentally regulated, acute-phase plasma protein in the chicken. J. Biol. Chem. 261, 15719-15724.
7. Heinemeyer, T., Wingender, E., Reuter, I., Hermjakob, H., Kel, A. E., Kel, O. V., Ignatieva, E. V., Ananko, E. A., Podkolodnaya, O. A., Kolpakov, F. A. et al. (1998). Databases on transcriptional regulation: TRANSFAC, TRRD and COMPEL. Nucleic Acids Res. 26, 362-367.
8. Hirayama, M., Nakaniwa, M., Ikeda, D., Hirazawa, N., Otaka, T., Mitsuboshi, T., Shirasu, K. and Watabe, S. (2003). Primary structures and gene organizations of two types of Wap65 from the pufferfish Takifugu rubripes. Fish Physiol. Biochem. 29, 211-224.
9. Hirayama, M., Kobiyama, A., Kinoshita, S. and Watabe, S. (2004). The occurrence of two types of hemopexin-like protein in medaka and differences in their affinity to heme. J. Exp. Biol. 207, 1387-1398.
10. Ishikawa, Y. (2000). Medakafish as a model system for vertebrate developmental genetics. BioEssays 22, 487-495.
11. Iwamatsu, T. (1994). Stages of normal development in the medaka Oryzias latipes. Zool. Sci. 11, 825-839.
12. Ju, B., Xu, Y., He, J., Liao, J., Yan, T., Hew, C. L., Lam, T. J. and Gong, Z. (1999). Faithful expression of green fluorescent protein (GFP) in transgenic zebrafish embryos under control of zebrafish gene promoters. Dev. Genet. 25, 158-167.
13. Kikuchi, K., Watabe, S., Suzuki, Y., Aida, K. and Nakajima, H. (1993). The 65-kDa cytosolic protein associated with warm temperature acclimation in goldfish, Carassius auratus. J. Comp. Physiol. B 163, 349-354.
14. Kikuchi, K., Yamashita, M., Watabe, S. and Aida, K. (1995). The warm temperature acclimation-related 65-kDa protein, Wap65, in goldfish and its gene expression. J. Biol. Chem. 270, 17087-17092.
15. Kikuchi, K., Watabe, S. and Aida, K. (1997). The Wap65 gene expression of goldfish (Carassius auratus) in association with warm water temperature as well as bacterial lipopolysaccharide (LPS). Fish Physiol. Biochem. 17, 423-432.
16. Kinoshita, M., Toyohara, H., Sakaguchi, M., Inoue, K., Yamashita, S., Satake, M., Wakamatsu, Y. and Ozato, K. (1996). A stable line of transgenic medaka (Oryzias latipes) carrying the CAT gene. Aquaculture 143, 267-276.
17. Kinoshita, S., Itoi, S. and Watabe, S. (2001). cDNA cloning and characterization of the warm-temperature-acclimation-associated protein Wap65 from carp, Cyprinus carpio. Fish Physiol. Biochem. 24, 125-134.
18. Kondo, M., Froschauer, A., Kitano, A., Nanda, I., Hornung, U., Volff, J. N., Asakawa, S., Mitani, H., Naruse, K., Tanaka, M. et al. (2002). Molecular cloning and characterization of DMRT genes from the medaka Oryzias latipes and the platyfish Xiphophorus maculatus. Gene 295, 213-222.
19. Law, M. L., Cai, G. Y., Hartz, J. A., Jones, C. and Kao, F. T. (1988). The hemopexin gene maps to the same location as the β-globin gene cluster on human chromosome 11. Genomics 3, 48-52.
20. Leussink, B., Brouwer, A., El Khattabi, M., Poelmann, R. E., Gittenberger-de Groot, A. C. and Meijlink, F. (1995). Expression patterns of the paired-related homeobox genes MHox/Prx1 and S8/Prx2 suggest roles in development of the heart and the forebrain. Mech. Dev. 52, 51-64.
21. Lints, T. J., Parsons, L. M., Hartley, L., Lyons, I. and Harvey, R. P. (1993). Nkx-2.5: a novel murine homeobox gene expressed in early heart progenitor cells and their myogenic descendants. Development 119, 419-431.
22. Morgan, W. T., Muster, P., Tatum, F. M., McConnell, J., Conway, T. P., Hensley, P. and Smith, A. (1988). Use of hemopexin domains and monoclonal antibodies to hemopexin to probe the molecular determinants of hemopexin-mediated heme transport. J. Biol. Chem. 263, 8220-8225.
23. Morgan, W. T., Muster, P., Tatum, F. M., Kao, S. M., Alam, J. and Smith, A. (1993). Identification of the histidine residues of hemopexin that coordinate with heme-iron and of a receptor-binding region. J. Biol. Chem. 268, 6256-6262.
24. Muneoka, K. and Sassoon, D. (1992). Molecular aspects of regeneration in developing vertebrate limbs. Dev. Biol. 152, 37-49.
25. Nikkila, H., Gitlin, J. D. and Muller-Eberhard, U. (1991). Rat hemopexin. Molecular cloning, primary structural characterization, and analysis of gene expression. Biochemistry 30, 823-829.
26. Paoli, M., Anderson, B. F., Baker, H. M., Morgan, W. T., Smith, A. and Baker, E. N. (1999). Crystal structure of hemopexin reveals a novel high-affinity heme site formed between two β-propeller domains. Nature Struct. Biol. 6, 926-931.
27. Schwartz, S., Zhang, Z., Frazer, K. A., Smit, A., Riemer, C., Bouck, J., Gibbs, R., Hardison, R. and Miller, W. (2000). PipMaker - a web server for aligning two genomic DNA sequences. Genome Res. 10, 577-586.
28. Subramanian, V., Meyer, B. I. and Gruss, P. (1995). Disruption of the murine homeobox gene Cdx1 affects axial skeletal identities by altering the mesodermal expression domains of Hox genes. Cell 83, 641-653.
29. Takagi, S., Sasado, T., Tamiya, G., Ozato, K., Wakamatsu, Y., Takeshita, A. and Kimura, M. (1994). An efficient expression vector for transgenic medaka construction. Mol. Mar. Biol. Biotechnol. 3, 192-199.
30. Takahashi, N., Takahashi, Y. and Putnam, F. W. (1985). Complete amino acid sequence of human hemopexin, the heme-binding protein of serum. Proc. Natl. Acad. Sci. USA 82, 73-77.
31. Tolosano, E. and Altruda, F. (2002). Hemopexin: structure, function, and regulation. DNA Cell Biol. 21, 297-306.
32. Watabe, S., Kikuchi, K. and Aida, K. (1993). Cold- and warm-temperature acclimation induces specific cytosolic proteins in goldfish and carp. Nippon Suisan Gakkaishi 59, 151-156.
33. Westerfield, M. (2000). The Zebrafish Book. A Guide for the Laboratory Use of Zebrafish (Danio rerio), 4th edn. Eugene, Oregon, USA: University of Oregon Press.