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Volumn 138, Issue 2, 2010, Pages 227-239

Structural and expressional analysis of the B-hordein genes in Tibetan hull-less barley

Author keywords

5 Flanking regulatory region; B hordeins; Hull less barley; Multigene family; Quantitative real time PCR (qRT PCR); Single oligonucleotide nested PCR (SON PCR)

Indexed keywords

GLUTEN; MESSENGER RNA; PRIMER DNA;

EID: 77949773169     PISSN: 00166707     EISSN: None     Source Type: Journal    
DOI: 10.1007/s10709-009-9415-6     Document Type: Article
Times cited : (13)

References (53)
  • 1
    • 0030863788 scopus 로고    scopus 로고
    • The α-gliadin gene family II DNA and protein sequence variation, subfamily structure, and origins of pseudogenes
    • Anderson OD, Greene FC (1997) The α-gliadin gene family II DNA and protein sequence variation, subfamily structure, and origins of pseudogenes. Theor Appl Genet 95: 9-65.
    • (1997) Theor Appl Genet , vol.95 , pp. 9-65
    • Anderson, O.D.1    Greene, F.C.2
  • 2
    • 0034888608 scopus 로고    scopus 로고
    • The wheat gamma-gliadin genes: Characterization of ten new sequences and further understanding of gamma-gliadin gene family structure
    • Anderson OD, Hsia CC, Torres V (2001) The wheat gamma-gliadin genes: characterization of ten new sequences and further understanding of gamma-gliadin gene family structure. Theor Appl Genet 103: 323-330.
    • (2001) Theor Appl Genet , vol.103 , pp. 323-330
    • Anderson, O.D.1    Hsia, C.C.2    Torres, V.3
  • 3
    • 7744234354 scopus 로고    scopus 로고
    • Single oligonucleotide nested PCR: A rapid method for the isolation of genes and their flanking regions from expressed sequence tags
    • Antal Z, Rascle C, Fevre M et al (2004) Single oligonucleotide nested PCR: a rapid method for the isolation of genes and their flanking regions from expressed sequence tags. Curr Genet 46: 240-246.
    • (2004) Curr Genet , vol.46 , pp. 240-246
    • Antal, Z.1    Rascle, C.2    Fevre, M.3
  • 4
    • 0035202917 scopus 로고    scopus 로고
    • Hordein polymorphism and variation of agromorphologicaltraits in a collection of naked barley
    • Atanassov P, Borries C, Zahrieva M et al (2001) Hordein polymorphism and variation of agromorphologicaltraits in a collection of naked barley. Genet Resour Crop Evol 48: 353-360.
    • (2001) Genet Resour Crop Evol , vol.48 , pp. 353-360
    • Atanassov, P.1    Borries, C.2    Zahrieva, M.3
  • 5
    • 0027925961 scopus 로고
    • Transcriptional control of plant storage protein genes
    • Bevan M, Colot V, Hammond-Kosack M et al (1993) Transcriptional control of plant storage protein genes. Phil Trans R Soc Lond B 342: 209-215.
    • (1993) Phil Trans R Soc Lond B , vol.342 , pp. 209-215
    • Bevan, M.1    Colot, V.2    Hammond-Kosack, M.3
  • 7
    • 0031815928 scopus 로고    scopus 로고
    • The wheat low-molecular-weight glutenin genes: Characterization of six new genes and progress in understanding gene family structure
    • Cassidy BG, Dvorak J, Anderson OD (1998) The wheat low-molecular-weight glutenin genes: characterization of six new genes and progress in understanding gene family structure. Theor Appl Genet 96: 743-750.
    • (1998) Theor Appl Genet , vol.96 , pp. 743-750
    • Cassidy, B.G.1    Dvorak, J.2    Anderson, O.D.3
  • 8
    • 3042587720 scopus 로고    scopus 로고
    • The low-molecular-weight glutenin subunits of wheat gluten
    • D'Ovidio R, Masci S (2004) The low-molecular-weight glutenin subunits of wheat gluten. J Cereal Sci 39: 321-339.
    • (2004) J Cereal Sci , vol.39 , pp. 321-339
    • D'Ovidio, R.1    Masci, S.2
  • 9
    • 0027158309 scopus 로고
    • Spatial and temporal patterns of B hordein synthesis in developing barley (Hordeum vulgare L.) caryopses
    • Davies JT, Shewry PR, Harris N (1993) Spatial and temporal patterns of B hordein synthesis in developing barley (Hordeum vulgare L.) caryopses. Cell Biol Int 17: 195-203.
    • (1993) Cell Biol Int , vol.17 , pp. 195-203
    • Davies, J.T.1    Shewry, P.R.2    Harris, N.3
  • 10
    • 0034085764 scopus 로고    scopus 로고
    • Molecular characterization of the inactive allele of the gene Glu-A1 and the development of a set of AS-PCR markers for HMW glutenin of wheat
    • De-Bustos A, Rubio P, Jouve N (2000) Molecular characterization of the inactive allele of the gene Glu-A1 and the development of a set of AS-PCR markers for HMW glutenin of wheat. Theor Appl Genet 100: 1085-1094.
    • (2000) Theor Appl Genet , vol.100 , pp. 1085-1094
    • De-Bustos, A.1    Rubio, P.2    Jouve, N.3
  • 11
    • 0000479431 scopus 로고
    • A rapid total DNA preparation procedure for fresh plant tissue
    • Doyle JJ, Doyle JL (1990) A rapid total DNA preparation procedure for fresh plant tissue. Focus 12: 13-15.
    • (1990) Focus , vol.12 , pp. 13-15
    • Doyle, J.J.1    Doyle, J.L.2
  • 12
    • 1542753416 scopus 로고    scopus 로고
    • Evaluating the malting quality of hulless CDC Dawn, acid-dehusked Harrington, and Harrington barley
    • Edney MJ, Langrell DE (2004) Evaluating the malting quality of hulless CDC Dawn, acid-dehusked Harrington, and Harrington barley. J Am Soc Brew Chem 62(1): 18-22.
    • (2004) J Am Soc Brew Chem , vol.62 , Issue.1 , pp. 18-22
    • Edney, M.J.1    Langrell, D.E.2
  • 13
    • 0022432514 scopus 로고
    • Nucleotide sequence of a B1 hordein gene and the identification of possible upstream regulatory elements in endosperm storage protein genes from barley, wheat and maize
    • Forde BG, Heyworth A, Pywell J et al (1985a) Nucleotide sequence of a B1 hordein gene and the identification of possible upstream regulatory elements in endosperm storage protein genes from barley, wheat and maize. Necleic Acids Res 13: 7327-7339.
    • (1985) Necleic Acids Res , vol.13 , pp. 7327-7339
    • Forde, B.G.1    Heyworth, A.2    Pywell, J.3
  • 14
    • 0002569055 scopus 로고
    • Short tandem repeats shared by B- and C-hordein cDNAs suggested a common evolutionary origin for two groups of cereal storage protein genes
    • Forde BG, Kreis M, Williamson MS et al (1985b) Short tandem repeats shared by B- and C-hordein cDNAs suggested a common evolutionary origin for two groups of cereal storage protein genes. EMBO J 4: 9-15.
    • (1985) EMBO J , vol.4 , pp. 9-15
    • Forde, B.G.1    Kreis, M.2    Williamson, M.S.3
  • 16
    • 0002658370 scopus 로고
    • Allelic variation at glutenin subunit and gliadin loci, Glu-1, Glu-3, and Gli-1 of common wheat. II. Biochemical basis of the allelic effects on dough properties
    • Gupta RB, Macritchie F (1994) Allelic variation at glutenin subunit and gliadin loci, Glu-1, Glu-3, and Gli-1 of common wheat. II. Biochemical basis of the allelic effects on dough properties. J Cereal Sci 19: 19-29.
    • (1994) J Cereal Sci , vol.19 , pp. 19-29
    • Gupta, R.B.1    Macritchie, F.2
  • 17
    • 0002658374 scopus 로고
    • Allelic variation at glutenin subunit and gliadin loci, Glu-1, Glu-3, and Gli-1, of common wheats. I. Its additive and interaction effects on dough properties
    • Gupta RB, Paul JG, Cornish GB et al (1994) Allelic variation at glutenin subunit and gliadin loci, Glu-1, Glu-3, and Gli-1, of common wheats. I. Its additive and interaction effects on dough properties. J Cereal Sci 19: 9-17.
    • (1994) J Cereal Sci , vol.19 , pp. 9-17
    • Gupta, R.B.1    Paul, J.G.2    Cornish, G.B.3
  • 18
    • 33749617100 scopus 로고    scopus 로고
    • Cloning and characterization of four B-hordein genes from Tibetan hull-less barley (Hordeum vulgare subsp. vulgare)
    • Han ZX, Qian G, Wu F et al (2006) Cloning and characterization of four B-hordein genes from Tibetan hull-less barley (Hordeum vulgare subsp. vulgare). Acta Genetica Sinica 33: 948-956.
    • (2006) Acta Genetica Sinica , vol.33 , pp. 948-956
    • Han, Z.X.1    Qian, G.2    Wu, F.3
  • 19
    • 77949773888 scopus 로고    scopus 로고
    • Cloning of B-hordein gene 5′ upstream regulation sequence in highland barley and sequence analysis
    • Han ZX, Wu F, Zhao T et al (2007) Cloning of B-hordein gene 5′ upstream regulation sequence in highland barley and sequence analysis. J Triticeae Crops 27(4): 613-618.
    • (2007) J Triticeae Crops , vol.27 , Issue.4 , pp. 613-618
    • Han, Z.X.1    Wu, F.2    Zhao, T.3
  • 20
    • 43849103500 scopus 로고    scopus 로고
    • Sequences variation and classification of B-hordein genes in hull-less barley from Qinghai-Tibet Plateau
    • Han ZX, Qian G, Wu F et al (2008) Sequences variation and classification of B-hordein genes in hull-less barley from Qinghai-Tibet Plateau. Mol Biol 42(1): 56-63.
    • (2008) Mol Biol , vol.42 , Issue.1 , pp. 56-63
    • Han, Z.X.1    Qian, G.2    Wu, F.3
  • 21
    • 0029411739 scopus 로고
    • The maize transcription factor Opaque-2 activates a wheat glutenin promoter in plant and yeast cells
    • Holdsworth MJ, Muñoz-Blanco J, Hammond-Kosack M et al (1995) The maize transcription factor Opaque-2 activates a wheat glutenin promoter in plant and yeast cells. Plant Mol Biol 29(4): 711-720.
    • (1995) Plant Mol Biol , vol.29 , Issue.4 , pp. 711-720
    • Holdsworth, M.J.1    Muñoz-Blanco, J.2    Hammond-Kosack, M.3
  • 22
    • 0034929179 scopus 로고    scopus 로고
    • Isolation and characterization of wheat ω-gliadin genes
    • Hsia CC, Anderson OD (2001) Isolation and characterization of wheat ω-gliadin genes. Ther Appl Genet 103: 37-44.
    • (2001) Ther Appl Genet , vol.103 , pp. 37-44
    • Hsia, C.C.1    Anderson, O.D.2
  • 23
    • 0006805244 scopus 로고
    • Sub-families of hordein mRNA encoded at the hor 2 locus of barley
    • Kreis M, Rahman S, Forde B et al (1983) Sub-families of hordein mRNA encoded at the hor 2 locus of barley. Mol Gen Genet 191: 194-200.
    • (1983) Mol Gen Genet , vol.191 , pp. 194-200
    • Kreis, M.1    Rahman, S.2    Forde, B.3
  • 24
    • 0021415012 scopus 로고
    • Molecular analysis of the effects of the lys3a gene on the expression of Hor loci in developing endosperms of barley (Hordeum vulgare L.)
    • Kreis M, Shewry PR, Forde BG et al (1984) Molecular analysis of the effects of the lys3a gene on the expression of Hor loci in developing endosperms of barley (Hordeum vulgare L.) Biochem Genet 22: 222-231.
    • (1984) Biochem Genet , vol.22 , pp. 222-231
    • Kreis, M.1    Shewry, P.R.2    Forde, B.G.3
  • 25
    • 0025305576 scopus 로고
    • Effects of primer-template mismatches on the polymerase chain reaction: Human immunodeficiency virus type 1 model studies
    • Kwok S, Kellogg DE, McKinney N et al (1990) Effects of primer-template mismatches on the polymerase chain reaction: human immunodeficiency virus type 1 model studies. Nucleic Acids Res 18: 999-1005.
    • (1990) Nucleic Acids Res , vol.18 , pp. 999-1005
    • Kwok, S.1    Kellogg, D.E.2    McKinney, N.3
  • 26
    • 0027292189 scopus 로고
    • Localization of the B-hordein locus on barley chromosomes using fluorescence in situ hybridization
    • Lehfer H, Busch W, Martin R et al (1993) Localization of the B-hordein locus on barley chromosomes using fluorescence in situ hybridization. Chromosoma 102: 428-432.
    • (1993) Chromosoma , vol.102 , pp. 428-432
    • Lehfer, H.1    Busch, W.2    Martin, R.3
  • 28
    • 33749612487 scopus 로고    scopus 로고
    • Tendency and counter measures on breeds improvement of Tibet highland barley
    • Luan YF, He Y (2004) Tendency and counter measures on breeds improvement of Tibet highland barley. Barley Sci 12: 1-4.
    • (2004) Barley Sci , vol.12 , pp. 1-4
    • Luan, Y.F.1    He, Y.2
  • 29
    • 0000345929 scopus 로고
    • The 5′ flanking region of a barley B hordein gene controls tissue and developmental specific CAT expression in tobacco plants
    • Marris C, Gallois P, Copley J (1988) The 5′ flanking region of a barley B hordein gene controls tissue and developmental specific CAT expression in tobacco plants. Plant Mol Biol 10: 359-366.
    • (1988) Plant Mol Biol , vol.10 , pp. 359-366
    • Marris, C.1    Gallois, P.2    Copley, J.3
  • 30
    • 1642555297 scopus 로고    scopus 로고
    • Genetic diversity in three groups of barley germplasm assessed by simple sequence repeats
    • Matus IA, Hayes PM (2002) Genetic diversity in three groups of barley germplasm assessed by simple sequence repeats. Genome 45: 1095-1106.
    • (2002) Genome , vol.45 , pp. 1095-1106
    • Matus, I.A.1    Hayes, P.M.2
  • 31
    • 0036658014 scopus 로고    scopus 로고
    • Relationships between barley hordeins and malting quality in a mutant of cv. Triumph. II. Genetic and environmental effects on water uptake
    • Molina-Cano JL, Sopena A, Polo JP et al (2002) Relationships between barley hordeins and malting quality in a mutant of cv. Triumph. II. Genetic and environmental effects on water uptake. J Cereal Sci 36: 39-50.
    • (2002) J Cereal Sci , vol.36 , pp. 39-50
    • Molina-Cano, J.L.1    Sopena, A.2    Polo, J.P.3
  • 32
    • 8844229009 scopus 로고    scopus 로고
    • Near infrared spectra indicate specific mutant endosperm genes and reveal a new mechanism for substituting starch with (1-3, 1-4)-β-glucan in barley
    • Munck L, Moller L, Jacobsen S et al (2004) Near infrared spectra indicate specific mutant endosperm genes and reveal a new mechanism for substituting starch with (1-3, 1-4)-β-glucan in barley. J Cereal Sci 40: 213-222.
    • (2004) J Cereal Sci , vol.40 , pp. 213-222
    • Munck, L.1    Moller, L.2    Jacobsen, S.3
  • 33
    • 33749588121 scopus 로고    scopus 로고
    • Hull-less barley and food safety in the region of plateau
    • Nimazhaxi (1998) Hull-less barley and food safety in the region of plateau. Tibetan Agric Technol 20: 20-25.
    • (1998) Tibetan Agric Technol , vol.20 , pp. 20-25
    • Nimazhaxi1
  • 34
    • 0033515633 scopus 로고    scopus 로고
    • Barley BLZ2, a seed-specific bZIP protein that interacts with BLZ1 in vivo and activates transcription from the GCN4-like motif of B-hordein promoters in barley endosperm
    • Oñate L, Vicente-Carbajosa J, Lara P (1999) Barley BLZ2, a seed-specific bZIP protein that interacts with BLZ1 in vivo and activates transcription from the GCN4-like motif of B-hordein promoters in barley endosperm. J Biol Chem 274: 9175-9182.
    • (1999) J Biol Chem , vol.274 , pp. 9175-9182
    • Oñate, L.1    Vicente-Carbajosa, J.2    Lara, P.3
  • 35
    • 0000975155 scopus 로고
    • Genetics of wheat storage protein and the effect of allelic variation on bread-making quality
    • Payne PI (1987) Genetics of wheat storage protein and the effect of allelic variation on bread-making quality. Ann Rev Plant Physiol 38: 141-153.
    • (1987) Ann Rev Plant Physiol , vol.38 , pp. 141-153
    • Payne, P.I.1
  • 36
    • 0028027187 scopus 로고
    • Hordein and malting quality in northern barleys
    • Peltonen J, Rita H, Aikasalo R et al (1994) Hordein and malting quality in northern barleys. Hereditas 120: 231-239.
    • (1994) Hereditas , vol.120 , pp. 231-239
    • Peltonen, J.1    Rita, H.2    Aikasalo, R.3
  • 37
    • 23944476847 scopus 로고    scopus 로고
    • Cloning and molecular characterization of B-hordeins from Hordeum chilense Roem et Schult
    • Piston F, Dorado G, Martin A et al (2005) Cloning and molecular characterization of B-hordeins from Hordeum chilense Roem et Schult. Theor Appl Genet 111: 551-560.
    • (2005) Theor Appl Genet , vol.111 , pp. 551-560
    • Piston, F.1    Dorado, G.2    Martin, A.3
  • 38
    • 0021764420 scopus 로고
    • Hordein-gene expression during development of the barley (Hordeum vulgare) endosperm
    • Rahman S, Kreis M, Forde BG et al (1984) Hordein-gene expression during development of the barley (Hordeum vulgare) endosperm. Biochem J 223: 315-322.
    • (1984) Biochem J , vol.223 , pp. 315-322
    • Rahman, S.1    Kreis, M.2    Forde, B.G.3
  • 40
    • 0025357314 scopus 로고
    • The prolamine storage proteins of cereal seeds: Structure and evolution
    • Shewry PR, Tatham AS (1990) The prolamine storage proteins of cereal seeds: structure and evolution. Biochem J 267: 1-12.
    • (1990) Biochem J , vol.267 , pp. 1-12
    • Shewry, P.R.1    Tatham, A.S.2
  • 41
    • 0029328357 scopus 로고
    • Seed storage proteins: Structures and biosynthesis
    • Shewry P, Napier J, Tatham A (1995) Seed storage proteins: structures and biosynthesis. Plant Cell 7: 945-956.
    • (1995) Plant Cell , vol.7 , pp. 945-956
    • Shewry, P.1    Napier, J.2    Tatham, A.3
  • 42
    • 7044264919 scopus 로고    scopus 로고
    • Differential expression of dehydrin genes in wild barley, Hordeum spontaneum, associated with resistance to water deficit
    • Suprunova T, Krugman T, Fahima T et al (2004) Differential expression of dehydrin genes in wild barley, Hordeum spontaneum, associated with resistance to water deficit. Plant Cell Environ 27: 1297-1308.
    • (2004) Plant Cell Environ , vol.27 , pp. 1297-1308
    • Suprunova, T.1    Krugman, T.2    Fahima, T.3
  • 43
    • 0001089073 scopus 로고
    • The origin and evolution of cultivated barley
    • Takahashi R (1955) The origin and evolution of cultivated barley. Adv Genet 7: 227-266.
    • (1955) Adv Genet , vol.7 , pp. 227-266
    • Takahashi, R.1
  • 44
    • 2442492215 scopus 로고    scopus 로고
    • Monophyletic origin of naked barley inferred from molecular analyses of a marker closely linked to the naked caryopsis gene. nud
    • Taketa S, Kikuchi S, Awayama T et al (2004) Monophyletic origin of naked barley inferred from molecular analyses of a marker closely linked to the naked caryopsis gene. nud. Theor Appl Genet 108: 1236-1242.
    • (2004) Theor Appl Genet , vol.108 , pp. 1236-1242
    • Taketa, S.1    Kikuchi, S.2    Awayama, T.3
  • 45
    • 34547781750 scopus 로고    scopus 로고
    • MEGA4: Molecular evolutionary genetics analysis (MEGA) software version 4.0
    • Tamura K, Dudley J, Nei M, Kumar S (2007) MEGA4: molecular evolutionary genetics analysis (MEGA) software version 4. 0. Mol Biol Evol 24: 1596-1599.
    • (2007) Mol Biol Evol , vol.24 , pp. 1596-1599
    • Tamura, K.1    Dudley, J.2    Nei, M.3    Kumar, S.4
  • 46
    • 0002470531 scopus 로고
    • The S-poor prolamins of wheat, barley and rye
    • Tatham A, Shewry P (1995) The S-poor prolamins of wheat, barley and rye. J Cereal Sci 22: 1-16.
    • (1995) J Cereal Sci , vol.22 , pp. 1-16
    • Tatham, A.1    Shewry, P.2
  • 47
    • 0027968068 scopus 로고
    • CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-speciWc gap penalties and weight matrix choice
    • Thompson JD, Higgins DG, Gibson TJ (1994) CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-speciWc gap penalties and weight matrix choice. Nucleic Acids Res 22: 4673-4680.
    • (1994) Nucleic Acids Res , vol.22 , pp. 4673-4680
    • Thompson, J.D.1    Higgins, D.G.2    Gibson, T.J.3
  • 48
    • 0026811685 scopus 로고
    • Conserved structure and organization of B hordein genes in the Hor2 locus of barley
    • Vicente-Carbajosa J, Beritashvili DR, Kraev AS et al (1992) Conserved structure and organization of B hordein genes in the Hor2 locus of barley. Plant Mol Biol 18: 453-458.
    • (1992) Plant Mol Biol , vol.18 , pp. 453-458
    • Vicente-Carbajosa, J.1    Beritashvili, D.R.2    Kraev, A.S.3
  • 49
    • 0029049164 scopus 로고
    • A novel DNA binding domain that may form a single zinc finger motif
    • Yanagisawa S (1995) A novel DNA binding domain that may form a single zinc finger motif. Nucleic Acids Res 23: 3403-3410.
    • (1995) Nucleic Acids Res , vol.23 , pp. 3403-3410
    • Yanagisawa, S.1
  • 50
    • 84981809484 scopus 로고
    • Decimal code for growth stages of cereals
    • Zadoks J, Chang T, Konzak C (1974) Decimal code for growth stages of cereals. Weed Res 14: 415-421.
    • (1974) Weed Res , vol.14 , pp. 415-421
    • Zadoks, J.1    Chang, T.2    Konzak, C.3
  • 51
    • 0000435440 scopus 로고
    • Ribosomal DNA polymorphisms and the Oriental-Occidental genetic differentiation in cultivated barley
    • Zhang Q, Maroof MS, Yang G et al (1992) Ribosomal DNA polymorphisms and the Oriental-Occidental genetic differentiation in cultivated barley. Theor Appl Genet 84: 682-687.
    • (1992) Theor Appl Genet , vol.84 , pp. 682-687
    • Zhang, Q.1    Maroof, M.S.2    Yang, G.3
  • 52
    • 0038150597 scopus 로고    scopus 로고
    • Identification of SNPs and development of allele-specific PCR markers for γ-gliadin alleles in Triticum aestivum
    • Zhang W, Gianibelli MC, Ma W et al (2003) Identification of SNPs and development of allele-specific PCR markers for γ-gliadin alleles in Triticum aestivum. Theor Appl Genet 107: 130-138.
    • (2003) Theor Appl Genet , vol.107 , pp. 130-138
    • Zhang, W.1    Gianibelli, M.C.2    Ma, W.3
  • 53
    • 33750076645 scopus 로고    scopus 로고
    • Characterization of three low-molecular-weight Glu-D3 subunit genes in common wheat
    • Zhao XL, Xia XC, He ZH et al (2006) Characterization of three low-molecular-weight Glu-D3 subunit genes in common wheat. Theor Appl Genet 113: 1247-1259.
    • (2006) Theor Appl Genet , vol.113 , pp. 1247-1259
    • Zhao, X.L.1    Xia, X.C.2    He, Z.H.3


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