A phylogenetic microarray targeting 16S rRNA genes from the bacterial division Acidobacteria reveals a lineage-specific distribution in a soil clay fraction

Soil Biology and Biochemistry

Volumn 42, Issue 5, 2010, Pages 739-747

  Liles, Mark R ^a   Turkmen, Ozgur ^a   Manske, Brian F ^b   Zhang, Mingzi ^b   Rouillard, Jean Marie ^c   George, Isabelle ^d   Balser, Teri ^b   Billor, Nedret ^a   Goodman, Robert M ^e  

^a AUBURN UNIVERSITY   (United States)

^b UNIVERSITY OF WISCONSIN MADISON   (United States)

^c UNIVERSITY OF MICHIGAN   (United States)

^d UNIVERSITÉ CATHOLIQUE DE LOUVAIN   (Belgium)

^e RUTGERS UNIVERSITY   (United States)

Author keywords

16S rRNA; Acidobacteria; Clay; Microarray; Phylochip; Phylogeny

Indexed keywords

16S RRNA; 16S RRNA GENE; ACIDOBACTERIA; COMPLEX SOILS; HIGH-DENSITY; HYBRIDIZATION SIGNAL; LEVEL DISTRIBUTION; LINEAR RELATIONSHIPS; MICROBIAL ASSEMBLAGE; MICROBIAL POPULATIONS; OLIGONUCLEOTIDE MICROARRAY; OLIGONUCLEOTIDE PROBES; PHYLOGENETIC ANALYSIS; PREDICTIVE VALUES; PROBE SEQUENCE; QUANTITATIVE PCR; RELATIVE ABUNDANCE; RRNA GENES; SOIL CLAY FRACTIONS; SPECIFIC DISTRIBUTION; WISCONSIN;

BACTERIOLOGY; BIOLOGY; GENES; OLIGONUCLEOTIDES; PROBES; RNA;

SOILS;

BACTERIUM; CLAY SOIL; HYBRIDIZATION; MICROBIAL COMMUNITY; PHYLOGENETICS; RNA; SOIL MICROORGANISM;

ACIDOBACTERIA; BACTERIA (MICROORGANISMS);

EID: 77749330122     PISSN: 00380717     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.soilbio.2010.01.007     Document Type: Article

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