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Volumn 26, Issue 1, 2009, Pages 335-352

Functional metagenomics: Recent advances and future challenges

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIA;

EID: 77749243418     PISSN: 02648725     EISSN: 20465556     Source Type: Journal    
DOI: 10.5661/bger-26-335     Document Type: Article
Times cited : (47)

References (42)
  • 5
    • 31944434504 scopus 로고    scopus 로고
    • Stable-isotope probing of DNA: Insights into the function of uncultivated microorganisms from isotopically labeled metagenomes
    • Friedrich, M.W., 2006. Stable-isotope probing of DNA:insights into the function of uncultivated microorganisms from isotopically labeled metagenomes. Current Opinion in Biotechnology, 17:59–66.
    • (2006) Current Opinion in Biotechnology , vol.17 , pp. 59-66
    • Friedrich, M.W.1
  • 7
    • 52449114817 scopus 로고    scopus 로고
    • Detection of large numbers of novel sequences in the metatranscriptomes of complex marine microbial communities
    • Gilbert, J.A., Field, D., Huang, Y., Edwards, R., Li, W., Gilna, P., and Joint, I., 2008. Detection of large numbers of novel sequences in the metatranscriptomes of complex marine microbial communities. PLoS ONE, 3:e3042
    • (2008) PLoS ONE , vol.3 , pp. e3042
    • Gilbert, J.A.1    Field, D.2    Huang, Y.3    Edwards, R.4    Li, W.5    Gilna, P.6    Joint, I.7
  • 9
    • 10344227692 scopus 로고    scopus 로고
    • Metagenomics: Application of genomics to uncultured microorganisms
    • Handelsman, J., 2004. Metagenomics:application of genomics to uncultured microorganisms. Microbiology and Molecular Biology Reviews, 68:669–685.
    • (2004) Microbiology and Molecular Biology Reviews , vol.68 , pp. 669-685
    • Handelsman, J.1
  • 10
    • 0032192790 scopus 로고    scopus 로고
    • Molecular biological access to the chemistry of unknown soil microbes: A new frontier for natural products
    • Handelsman, J., Rondon, M.R., Brady, S.F., Clardy, J., and Goodman, R.M., 1998. Molecular biological access to the chemistry of unknown soil microbes:a new frontier for natural products. Chemistry and Biology, 5:R245–249.
    • (1998) Chemistry and Biology , vol.5 , pp. R245-R249
    • Handelsman, J.1    Rondon, M.R.2    Brady, S.F.3    Clardy, J.4    Goodman, R.M.5
  • 13
    • 85069185830 scopus 로고    scopus 로고
    • Genome sequence databases (overview): Sequencing and assembly
    • Schaechter M., (ed), New York: Elsevier
    • Lapidus, A., 2009. “ Genome sequence databases (overview):sequencing and assembly ”. In The Encyclopedia of Microbiology, Edited by:Schaechter, M., 196–210. New York:Elsevier.
    • (2009) The Encyclopedia of Microbiology , pp. 196-210
    • Lapidus, A.1
  • 15
    • 38549144166 scopus 로고    scopus 로고
    • The Genomes On Line Database (GOLD) in 2007: Status of genomic and metagenomic projects and their associated metadata
    • Liolios, K., Mavromatis, K., Tavernarakis, N., and Kyrpides, N.C., 2008. The Genomes On Line Database (GOLD) in 2007:status of genomic and metagenomic projects and their associated metadata. Nucleic Acids Research, 36:D475–479.
    • (2008) Nucleic Acids Research , vol.36 , pp. D475-D479
    • Liolios, K.1    Mavromatis, K.2    Tavernarakis, N.3    Kyrpides, N.C.4
  • 17
    • 38949113807 scopus 로고    scopus 로고
    • Bacterial carbon processing by generalist species in the coastal ocean
    • Mou, X., Sun, S., Edwards, R.A., Hodson, R.E., and Moran, M.A., 2008. Bacterial carbon processing by generalist species in the coastal ocean. Nature, 451:708–711.
    • (2008) Nature , vol.451 , pp. 708-711
    • Mou, X.1    Sun, S.2    Edwards, R.A.3    Hodson, R.E.4    Moran, M.A.5
  • 19
    • 66649089244 scopus 로고    scopus 로고
    • Comparative day/night metatranscriptomic analysis of microbial communities in the North Pacific subtropical gyre
    • Poretsky, R.S., Hewson, I., Sun, S., Allen, A.E., Zehr, J.P., and Moran, M.A., 2009. Comparative day/night metatranscriptomic analysis of microbial communities in the North Pacific subtropical gyre. Environmental Microbiology, 11:1358–1375.
    • (2009) Environmental Microbiology , vol.11 , pp. 1358-1375
    • Poretsky, R.S.1    Hewson, I.2    Sun, S.3    Allen, A.E.4    Zehr, J.P.5    Moran, M.A.6
  • 20
    • 65449125343 scopus 로고    scopus 로고
    • Targeting the human microbiome with antibiotics, probiotics, and prebiotics: Gastroenterology enters the metagenomics era
    • Preidis, G.A., and Versalovic, J., 2009. Targeting the human microbiome with antibiotics, probiotics, and prebiotics:gastroenterology enters the metagenomics era. Gastroenterology, 136:2015–2031.
    • (2009) Gastroenterology , vol.136 , pp. 2015-2031
    • Preidis, G.A.1    Versalovic, J.2
  • 22
    • 23944495106 scopus 로고    scopus 로고
    • Metagenomics for studying unculturable microorganisms: Cutting the Gordian knot
    • Schloss, PD, and Handelsman, J., 2005. Metagenomics for studying unculturable microorganisms:cutting the Gordian knot. Genome Biology, 6:229
    • (2005) Genome Biology , vol.6 , pp. 229
    • Schloss, P.D.1    Handelsman, J.2
  • 24
    • 0025860931 scopus 로고
    • Analysis of a marine picoplankton community by 16S rRNA gene cloning and sequencing
    • Schmidt, T.M., DeLong, E.F., and Pace, N.R., 1991. Analysis of a marine picoplankton community by 16S rRNA gene cloning and sequencing. Journal of Bacteriology, 173:4371–4378.
    • (1991) Journal of Bacteriology , vol.173 , pp. 4371-4378
    • Schmidt, T.M.1    DeLong, E.F.2    Pace, N.R.3
  • 25
    • 58149086963 scopus 로고    scopus 로고
    • Next-generation sequencingthe promise and perils of charting the great microbial unknown
    • Snyder, L.A., Loman, N., Pallen, M.J., and Penn, C.W., 2008. Next-generation sequencingthe promise and perils of charting the great microbial unknown. Microbial Ecology, 57:1–3.
    • (2008) Microbial Ecology , vol.57 , pp. 1-3
    • Snyder, L.A.1    Loman, N.2    Pallen, M.J.3    Penn, C.W.4
  • 26
    • 0021779934 scopus 로고
    • Measurement of in situ activities of nonphotosynthetic microorganisms in aquatic and terrestrial habitats
    • Staley, J.T., and Konopka, A., 1985. Measurement of in situ activities of nonphotosynthetic microorganisms in aquatic and terrestrial habitats. Annual Review of Microbiology, 39:321–346.
    • (1985) Annual Review of Microbiology , vol.39 , pp. 321-346
    • Staley, J.T.1    Konopka, A.2
  • 32
    • 49649087440 scopus 로고    scopus 로고
    • Simultaneous assessment of soil microbial community structure and function through analysis of the meta-transcriptome
    • Urich, T., Lanzén, A., Qi, J., Huson, D.H., Schleper, C., and Schuster, S.C., 2008. Simultaneous assessment of soil microbial community structure and function through analysis of the meta-transcriptome. PLoS One, 3:e2527
    • (2008) PLoS One , vol.3 , pp. e2527
    • Urich, T.1    Lanzén, A.2    Qi, J.3    Huson, D.H.4    Schleper, C.5    Schuster, S.C.6
  • 34
    • 60749119754 scopus 로고    scopus 로고
    • Systems biology: Functional analysis of natural microbial consortia using community proteomics
    • VerBerkmoes, N.C., Denef, V.J., Hettich, R.L., and Banfield, J.F., 2009. Systems biology:Functional analysis of natural microbial consortia using community proteomics. Nature Reviews Microbiology, 7:196–205.
    • (2009) Nature Reviews Microbiology , vol.7 , pp. 196-205
    • VerBerkmoes, N.C.1    Denef, V.J.2    Hettich, R.L.3    Banfield, J.F.4
  • 36
    • 65749105400 scopus 로고    scopus 로고
    • A perspective: Metatranscriptomics as a tool for the discovery of novel biocatalysts
    • Warnecke, F., and Hess, M., 2009. A perspective:metatranscriptomics as a tool for the discovery of novel biocatalysts. Journal of Biotechnology, 142:91–95.
    • (2009) Journal of Biotechnology , vol.142 , pp. 91-95
    • Warnecke, F.1    Hess, M.2
  • 38
    • 49449111457 scopus 로고    scopus 로고
    • Community proteogenomics highlights microbial strain-variant protein expression within activated sludge performing enhanced biological phosphorus removal
    • Wilmes, P., Andersson, A.F., Lefsrud, M.G., Wexler, M., Shah, M., Zhang, B., Hettich, R.L., Bond, P.L., VerBerkmoes, N. C., and Banfield, J.F., 2008. Community proteogenomics highlights microbial strain-variant protein expression within activated sludge performing enhanced biological phosphorus removal. ISME Journal, 2:853–864.
    • (2008) ISME Journal , vol.2 , pp. 853-864
    • Wilmes, P.1    Andersson, A.F.2    Lefsrud, M.G.3    Wexler, M.4    Shah, M.5    Zhang, B.6    Hettich, R.L.7    Bond, P.L.8    VerBerkmoes, N.C.9    Banfield, J.F.10
  • 39
  • 40
    • 0032488048 scopus 로고    scopus 로고
    • A manifesto for microbial genomics
    • Woese, C.R., 1998. A manifesto for microbial genomics. Current Biology, 8:R781–R783.
    • (1998) Current Biology , vol.8 , pp. R781-R783
    • Woese, C.R.1


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