메뉴 건너뛰기




Volumn 142, Issue 1, 2009, Pages 91-95

A perspective: Metatranscriptomics as a tool for the discovery of novel biocatalysts

Author keywords

Metagenomics; Metatranscriptomics; Next generation sequencing technologies; Novel biocatalysts

Indexed keywords

BIOTECHNOLOGICAL APPLICATIONS; EFFICIENT METHOD; EXPRESSION PROFILING; INNOVATIVE APPROACHES; METAGENOMICS; METATRANSCRIPTOMICS; MICROBIAL COMMUNITIES; NEXT GENERATION SEQUENCING TECHNOLOGIES; NOVEL BIOCATALYSTS;

EID: 65749105400     PISSN: 01681656     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.jbiotec.2009.03.022     Document Type: Article
Times cited : (83)

References (33)
  • 1
    • 42349093774 scopus 로고    scopus 로고
    • Single-cell identification in microbial communities by improved fluorescence in situ hybridization techniques
    • Amann R., and Fuchs B.M. Single-cell identification in microbial communities by improved fluorescence in situ hybridization techniques. Nat. Rev. Microbiol. 6 (2008) 339
    • (2008) Nat. Rev. Microbiol. , vol.6 , pp. 339
    • Amann, R.1    Fuchs, B.M.2
  • 2
    • 57449117295 scopus 로고    scopus 로고
    • DNA microarray analysis of the heat shock transcriptome of the obligate intracytoplasmic pathogen Rickettsia prowazekii
    • Audia J.P., Patton M.C., and Winkler H.H. DNA microarray analysis of the heat shock transcriptome of the obligate intracytoplasmic pathogen Rickettsia prowazekii. Appl. Environ. Microbiol. 74 (2008) 7809-7812
    • (2008) Appl. Environ. Microbiol. , vol.74 , pp. 7809-7812
    • Audia, J.P.1    Patton, M.C.2    Winkler, H.H.3
  • 5
    • 52949152827 scopus 로고    scopus 로고
    • Sediment denitrifier community composition and nirS gene expression investigated with functional gene microarrays
    • Bulow S.E., Francis C.A., Jackson G.A., and Ward B.B. Sediment denitrifier community composition and nirS gene expression investigated with functional gene microarrays. Environ. Microbiol. 10 (2008) 3057-3069
    • (2008) Environ. Microbiol. , vol.10 , pp. 3057-3069
    • Bulow, S.E.1    Francis, C.A.2    Jackson, G.A.3    Ward, B.B.4
  • 6
    • 55749094854 scopus 로고    scopus 로고
    • Fast forward genetics
    • Darby A.C., and Hall N. Fast forward genetics. Nat. Biotechnol. 26 (2008) 1248-1249
    • (2008) Nat. Biotechnol. , vol.26 , pp. 1248-1249
    • Darby, A.C.1    Hall, N.2
  • 7
    • 44049102130 scopus 로고    scopus 로고
    • The use of molecular techniques based on ribosomal RNA and DNA for rumen microbial ecosystem studies: a review
    • Deng W., Xi D., Mao H., and Wanapat M. The use of molecular techniques based on ribosomal RNA and DNA for rumen microbial ecosystem studies: a review. Mol. Biol. Rep. 35 (2008) 265-274
    • (2008) Mol. Biol. Rep. , vol.35 , pp. 265-274
    • Deng, W.1    Xi, D.2    Mao, H.3    Wanapat, M.4
  • 10
    • 33846435742 scopus 로고    scopus 로고
    • Microarray-based analysis of microbial community rnas by whole-community rna amplification
    • Gao H., Yang Z.K., Gentry T.J., Wu L., Schadt C.W., and Zhou J. Microarray-based analysis of microbial community rnas by whole-community rna amplification. Appl. Environ. Microbiol. 73 (2007) 563-571
    • (2007) Appl. Environ. Microbiol. , vol.73 , pp. 563-571
    • Gao, H.1    Yang, Z.K.2    Gentry, T.J.3    Wu, L.4    Schadt, C.W.5    Zhou, J.6
  • 11
    • 52449114817 scopus 로고    scopus 로고
    • Detection of large numbers of novel sequences in the metatranscriptomes of complex marine microbial communities
    • Gilbert J.A., Field D., Huang Y., Edwards R., Li W., Gilna P., and JointF I. Detection of large numbers of novel sequences in the metatranscriptomes of complex marine microbial communities. PLoS ONE 3 (2008) e3042
    • (2008) PLoS ONE , vol.3
    • Gilbert, J.A.1    Field, D.2    Huang, Y.3    Edwards, R.4    Li, W.5    Gilna, P.6    JointF, I.7
  • 12
    • 52949115612 scopus 로고    scopus 로고
    • Microbiology: metagenomics
    • Hugenholtz P., and Tyson G.W. Microbiology: metagenomics. Nature 455 (2008) 481
    • (2008) Nature , vol.455 , pp. 481
    • Hugenholtz, P.1    Tyson, G.W.2
  • 17
    • 55549108089 scopus 로고    scopus 로고
    • Engineered enzymes for chemical production
    • Luetz S., Giver L., and Lalonde J. Engineered enzymes for chemical production. Biotechnol. Bioeng. 101 (2008) 647-653
    • (2008) Biotechnol. Bioeng. , vol.101 , pp. 647-653
    • Luetz, S.1    Giver, L.2    Lalonde, J.3
  • 20
    • 0030982247 scopus 로고    scopus 로고
    • A molecular view of microbial diversity and the biosphere
    • Pace N.R. A molecular view of microbial diversity and the biosphere. Science 276 (1997) 734-740
    • (1997) Science , vol.276 , pp. 734-740
    • Pace, N.R.1
  • 21
    • 33846110892 scopus 로고    scopus 로고
    • Analysis of environmental transcriptomes by DNA microarrays
    • Parro V., Moreno-Paz M., and Gonzalez-Toril E. Analysis of environmental transcriptomes by DNA microarrays. Environ. Microbiol. 9 (2007) 453-464
    • (2007) Environ. Microbiol. , vol.9 , pp. 453-464
    • Parro, V.1    Moreno-Paz, M.2    Gonzalez-Toril, E.3
  • 23
    • 55949122708 scopus 로고    scopus 로고
    • DNA microarray-based global transcriptional profiling of Yersinia pestis in multicellularity
    • Qiu J., Guo Z., Liu H., Zhou D., Han Y., and Yang R. DNA microarray-based global transcriptional profiling of Yersinia pestis in multicellularity. J. Microbiol. 46 (2008) 557-563
    • (2008) J. Microbiol. , vol.46 , pp. 557-563
    • Qiu, J.1    Guo, Z.2    Liu, H.3    Zhou, D.4    Han, Y.5    Yang, R.6
  • 24
    • 67349147516 scopus 로고    scopus 로고
    • A novel family VIII carboxylesterase derived from a leachate metagenome library exhibits promiscuous beta-lactamase activity on nitrocefin
    • Rashamuse K., Magomani V., Ronneburg T., and Brady D. A novel family VIII carboxylesterase derived from a leachate metagenome library exhibits promiscuous beta-lactamase activity on nitrocefin. Appl. Microbiol. Biotechnol. (2009)
    • (2009) Appl. Microbiol. Biotechnol.
    • Rashamuse, K.1    Magomani, V.2    Ronneburg, T.3    Brady, D.4
  • 25
    • 49649106060 scopus 로고    scopus 로고
    • Genomics of cellulosic biofuels
    • Rubin E.M. Genomics of cellulosic biofuels. Nature 454 (2008) 841
    • (2008) Nature , vol.454 , pp. 841
    • Rubin, E.M.1
  • 28
    • 3543107224 scopus 로고    scopus 로고
    • Prospecting for biocatalysts and drugs in the genomes of non-cultured microorganisms
    • Streit W., Daniel R., and Jaeger K.-E. Prospecting for biocatalysts and drugs in the genomes of non-cultured microorganisms. Curr. Opin. Biotechnol. 15 (2004) 285-290
    • (2004) Curr. Opin. Biotechnol. , vol.15 , pp. 285-290
    • Streit, W.1    Daniel, R.2    Jaeger, K.-E.3
  • 29
    • 0037052493 scopus 로고    scopus 로고
    • Prokaryotic diversity-magnitude, dynamics, and controlling factors
    • Torsvik V., Øvreås L., and Thingstad T.F. Prokaryotic diversity-magnitude, dynamics, and controlling factors. Science 296 (2002) 1064-1066
    • (2002) Science , vol.296 , pp. 1064-1066
    • Torsvik, V.1    Øvreås, L.2    Thingstad, T.F.3
  • 30
    • 84920629237 scopus 로고    scopus 로고
    • A renaissance for the pioneering 16S rRNA gene
    • Tringe S.G., and Hugenholtz P. A renaissance for the pioneering 16S rRNA gene. Curr. Opin. Microbiol. 11 (2008) 442-446
    • (2008) Curr. Opin. Microbiol. , vol.11 , pp. 442-446
    • Tringe, S.G.1    Hugenholtz, P.2
  • 31
    • 49649087440 scopus 로고    scopus 로고
    • Simultaneous assessment of soil microbial community structure and function through analysis of the meta-transcriptome
    • Urich T., Lanzen A., Qi J., Huson D.H., Schleper C., and SchusterF S.C. Simultaneous assessment of soil microbial community structure and function through analysis of the meta-transcriptome. PLoS ONE 3 (2008) e2527
    • (2008) PLoS ONE , vol.3
    • Urich, T.1    Lanzen, A.2    Qi, J.3    Huson, D.H.4    Schleper, C.5    SchusterF, S.C.6
  • 33
    • 55149119892 scopus 로고    scopus 로고
    • A novel DNA microarray for rapid diagnosis of enteropathogenic bacteria in stool specimens of patients with diarrhea
    • You Y., Fu C., Zeng X., Fang D., Yan X., Sun B., Xiao D., and Zhang J. A novel DNA microarray for rapid diagnosis of enteropathogenic bacteria in stool specimens of patients with diarrhea. J. Microbiol. Methods 75 (2008) 566-571
    • (2008) J. Microbiol. Methods , vol.75 , pp. 566-571
    • You, Y.1    Fu, C.2    Zeng, X.3    Fang, D.4    Yan, X.5    Sun, B.6    Xiao, D.7    Zhang, J.8


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.