Genome Sequence Databases: Sequencing and Assembly

Encyclopedia of Microbiology, Third Edition

Volumn , Issue , 2009, Pages 196-210

  Lapidus, A L ^a  

^a DOE JOINT GENOME INSTITUTE   (United States)

Author keywords

contig; DNA sequencing; genome finishing; misassembly; read; scaffold; Whole Genome Shotgun assembly

Indexed keywords

EID: 85069185830     PISSN: None     EISSN: None     Source Type: Book    
DOI: 10.1016/B978-012373944-5.00028-6     Document Type: Chapter

References (28)

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15. http://amos.sourceforge.net/ - AMOS: A Modular Open-Source Assembler
16. http://www.appliedbiosystems.com/ - Applied Biosystems
17. http://www.jgi.doe.gov/ - JGI DOE Joint Genome Institute US Department of Energy
18. http://www.ebi.ac.uk/ - EMBL-EBI
19. http://genome.jgi-psf.org/ - Eukaryotic Genomics
20. http://www.genomesonline.org/ - GOLD: The Genomes On Line Database
21. http://www.algorithm.cs.sunysb.edu/ - Index of
22. http://www.pasteur.fr/ - Institut Pasteur
23. http://www.phrap.org/ - Laboratory of PHIL GREEN
24. http://www.ncbi.nlm.nih.gov/ - National Center for Biotechnology Information
25. http://shgc.stanford.edu/ - Stanford Human Genome Center
26. http://www.synamatix.com/ - Synamatix Next Generation Bioinformatics
27. http://www.vmatch.de/ - The Vmatch large scale sequence analysis software
28. http://staden.sourceforge.net/ - Welcome to the Staden Package www site