메뉴 건너뛰기




Volumn 20, Issue 5, 2004, Pages 956-966

Cohort analysis of a single nucleotide polymorphism on DNA chips

Author keywords

Cohort analysis; DNA chips; Single nucleotide polymorphism

Indexed keywords

BIOSENSORS; DISSOCIATION; GENES; MUTAGENESIS; PHENOLS; PROTEINS;

EID: 7644238946     PISSN: 09565663     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.bios.2004.06.012     Document Type: Article
Times cited : (7)

References (49)
  • 1
    • 0033824460 scopus 로고    scopus 로고
    • Determination of single-nucleotide polymorphisms by real-time pyrophosphate DNA sequencing
    • Alderborn A., Kristofferson A., Hammerling U. Determination of single-nucleotide polymorphisms by real-time pyrophosphate DNA sequencing. Genome Res. 10:2000;1249-1258
    • (2000) Genome Res. , vol.10 , pp. 1249-1258
    • Alderborn, A.1    Kristofferson, A.2    Hammerling, U.3
  • 3
    • 0032533431 scopus 로고    scopus 로고
    • Signal amplification of padlock probes by rolling circle replication
    • Banér J., Nilsson M., Mendel-Hartvig M., Landegren U. Signal amplification of padlock probes by rolling circle replication. Nucl. Acids Res. 26:1998;5073-5078
    • (1998) Nucl. Acids Res. , vol.26 , pp. 5073-5078
    • Banér, J.1    Nilsson, M.2    Mendel-Hartvig, M.3    Landegren, U.4
  • 4
    • 0026056970 scopus 로고
    • Genetic disease detection and DNA amplification using cloned thermostable ligase
    • Barany F. Genetic disease detection and DNA amplification using cloned thermostable ligase. Proc. Natl. Acad. Sci. USA. 88:1991;189-193
    • (1991) Proc. Natl. Acad. Sci. USA , vol.88 , pp. 189-193
    • Barany, F.1
  • 5
    • 0037630867 scopus 로고    scopus 로고
    • The use of nuclear and mitochondrial single nucleotide polymorphisms to identify cryptic species
    • Belfiore N.M., Hoffman G.F., Baker R.J., Dewoody J.A. The use of nuclear and mitochondrial single nucleotide polymorphisms to identify cryptic species. Mol. Ecol. 12:2003;2011-2017
    • (2003) Mol. Ecol. , vol.12 , pp. 2011-2017
    • Belfiore, N.M.1    Hoffman, G.F.2    Baker, R.J.3    Dewoody, J.A.4
  • 6
    • 0030673034 scopus 로고    scopus 로고
    • Real time measurement of nucleic acid hybridization using evanescent wave sensors - Steps towards the genosensor
    • Bier F.F., Kleinjung F., Scheller F.W. Real time measurement of nucleic acid hybridization using evanescent wave sensors - steps towards the genosensor. Sens. Actuators B. 38-39:1997;78-82
    • (1997) Sens. Actuators B , vol.3839 , pp. 78-82
    • Bier, F.F.1    Kleinjung, F.2    Scheller, F.W.3
  • 7
    • 2342577561 scopus 로고    scopus 로고
    • Early failure of dental implants and TNF-alpha (G-308A) gene polymorphism
    • Campos M.I., dos Santos M.C., et al. Early failure of dental implants and TNF-alpha (G-308A) gene polymorphism. Implant Dent. 13(1):2004;95-101
    • (2004) Implant Dent. , vol.13 , Issue.1 , pp. 95-101
    • Campos, M.I.1    Dos Santos, M.C.2
  • 8
    • 0032991552 scopus 로고    scopus 로고
    • Characterization of single-nucleotide polymorphisms in coding regions of human genes
    • Cargill M., Altshuler D., Ireland J. Characterization of single-nucleotide polymorphisms in coding regions of human genes. Nat. Genet. 22:1999;231-238
    • (1999) Nat. Genet. , vol.22 , pp. 231-238
    • Cargill, M.1    Altshuler, D.2    Ireland, J.3
  • 9
    • 0036448454 scopus 로고    scopus 로고
    • Sulfation through the looking glass - Recent advances in sulfotransferase research for the curious
    • Coughtrie M.W.H. Sulfation through the looking glass - recent advances in sulfotransferase research for the curious. Pharmacogenomics J. 2:2002;297-308
    • (2002) Pharmacogenomics J. , vol.2 , pp. 297-308
    • Coughtrie, M.W.H.1
  • 10
    • 0035315846 scopus 로고    scopus 로고
    • Manufacturing DNA microarrays of high spot homogeneity and reduced background signal
    • Diehl F., Grahlmann S., Beier M., Hoheisel J.D. Manufacturing DNA microarrays of high spot homogeneity and reduced background signal. Nucl. Acids Res. 29(7):2001;e38
    • (2001) Nucl. Acids Res. , vol.29 , Issue.7 , pp. 38
    • Diehl, F.1    Grahlmann, S.2    Beier, M.3    Hoheisel, J.D.4
  • 11
    • 0034031964 scopus 로고    scopus 로고
    • Association between functional genetic polymorphisms of human sulfotransferases 1A1 and 1A2
    • Engelke C.E.H., Meinl W., Boeing H., Glatt H. Association between functional genetic polymorphisms of human sulfotransferases 1A1 and 1A2. Pharmacogenomics. 10:2000;163-169
    • (2000) Pharmacogenomics , vol.10 , pp. 163-169
    • Engelke, C.E.H.1    Meinl, W.2    Boeing, H.3    Glatt, H.4
  • 12
    • 7644231165 scopus 로고    scopus 로고
    • High-density fibre optic array technology and its application in functional genomic studies
    • Fan J., Che D., Zhao C., Zhou L., Feng W. High-density fibre optic array technology and its application in functional genomic studies. Chin. Sci. Bull. 48(18):2003;1903-1905
    • (2003) Chin. Sci. Bull. , vol.48 , Issue.18 , pp. 1903-1905
    • Fan, J.1    Che, D.2    Zhao, C.3    Zhou, L.4    Feng, W.5
  • 13
    • 0033578928 scopus 로고    scopus 로고
    • Universal DNA microarray method for multiplex detection of low abundance point mutations
    • Gerry N.P., Witowski N.E., Day J., Hammer R.P., Barany G., Barany F. Universal DNA microarray method for multiplex detection of low abundance point mutations. J. Mol. Biol. 292:1999;251-262
    • (1999) J. Mol. Biol. , vol.292 , pp. 251-262
    • Gerry, N.P.1    Witowski, N.E.2    Day, J.3    Hammer, R.P.4    Barany, G.5    Barany, F.6
  • 18
    • 0036137971 scopus 로고    scopus 로고
    • Effect of oligonucleotide truncation on single-nucleotide distinction by solid-phase hybridization
    • Jobs M., Frederiksson S., Brookes A.J., Landegren U. Effect of oligonucleotide truncation on single-nucleotide distinction by solid-phase hybridization. Anal. Chem. 74:2002;199-202
    • (2002) Anal. Chem. , vol.74 , pp. 199-202
    • Jobs, M.1    Frederiksson, S.2    Brookes, A.J.3    Landegren, U.4
  • 19
    • 0038781886 scopus 로고    scopus 로고
    • DASH-2: Flexible, low-cost, and high-throughput SNP genotyping by dynamic allele-specific hybridization on membrane arrays
    • Jobs M., Howell W.M., et al. DASH-2: flexible, low-cost, and high-throughput SNP genotyping by dynamic allele-specific hybridization on membrane arrays. Genome Res. 13:2003;916-924
    • (2003) Genome Res. , vol.13 , pp. 916-924
    • Jobs, M.1    Howell, W.M.2
  • 20
    • 0344436038 scopus 로고    scopus 로고
    • DNA sequence variation in a non-coding region of low recombination on the human X chromosome
    • Kaessmann H., Heißig F., von Haeseler A., Pääbo S. DNA sequence variation in a non-coding region of low recombination on the human X chromosome. Nat. Genet. 22:1999;78-81
    • (1999) Nat. Genet. , vol.22 , pp. 78-81
    • Kaessmann, H.1    Heißig, F.2    Von Haeseler, A.3    Pääbo, S.4
  • 21
    • 10744221619 scopus 로고    scopus 로고
    • Large-scale genotyping of complex DNA
    • Kennedy G.C., Matsuzaki H. Large-scale genotyping of complex DNA. Nat. Biotechnol. 21(10):2003;1233-1237
    • (2003) Nat. Biotechnol. , vol.21 , Issue.10 , pp. 1233-1237
    • Kennedy, G.C.1    Matsuzaki, H.2
  • 23
    • 0033829676 scopus 로고    scopus 로고
    • Kinetische Messungen auf einem DNA-Chip
    • Kleinjung F. Kinetische Messungen auf einem DNA-Chip. Medgen. 12:2000;307
    • (2000) Medgen , vol.12 , pp. 307
    • Kleinjung, F.1
  • 24
    • 0035776497 scopus 로고    scopus 로고
    • Methods for genotyping single nucleotide polymorphisms
    • Kwok P.-Y. Methods for genotyping single nucleotide polymorphisms. Annu. Rev. Genom. Human Genet. 2:2001;235-258
    • (2001) Annu. Rev. Genom. Human Genet. , vol.2 , pp. 235-258
    • Kwok, P.-Y.1
  • 25
    • 0033006003 scopus 로고    scopus 로고
    • Allelic discrimination using fluorogenic probes and the 5′ nuclease assay
    • Livak K.J. Allelic discrimination using fluorogenic probes and the 5′ nuclease assay. Genet. Anal.: Biomol. Eng. 14:1999;143-149
    • (1999) Genet. Anal.: Biomol. Eng. , vol.14 , pp. 143-149
    • Livak, K.J.1
  • 26
    • 0031831323 scopus 로고    scopus 로고
    • Mutation detection and single-molecule counting using isothermal rolling-circle amplification
    • Lizardi P.M., Huang X., Zhu Z., Bray-Ward P., Thomas D.C., Ward D.C. Mutation detection and single-molecule counting using isothermal rolling-circle amplification. Nat. Genet. 19:1998;225-232
    • (1998) Nat. Genet. , vol.19 , pp. 225-232
    • Lizardi, P.M.1    Huang, X.2    Zhu, Z.3    Bray-Ward, P.4    Thomas, D.C.5    Ward, D.C.6
  • 27
    • 0035666996 scopus 로고    scopus 로고
    • Characterization of human liver thermostable phenol sulfotransferase (SULT1A1) allozymes with 3,3′,5-triiodothyronine as the substrate
    • Li X., Clemens D.L. Characterization of human liver thermostable phenol sulfotransferase (SULT1A1) allozymes with 3,3′,5-triiodothyronine as the substrate. J. Endokrinol. 171:2001;525-532
    • (2001) J. Endokrinol. , vol.171 , pp. 525-532
    • Li, X.1    Clemens, D.L.2
  • 28
    • 12144286180 scopus 로고    scopus 로고
    • Parallel genotyping of over 10.000 SNPs using a one-primer assay on a high-density oligonucleotide array
    • Matsuzaki H., Loi H., et al. Parallel genotyping of over 10.000 SNPs using a one-primer assay on a high-density oligonucleotide array. Genome Res. 14:2004;414-425
    • (2004) Genome Res. , vol.14 , pp. 414-425
    • Matsuzaki, H.1    Loi, H.2
  • 29
    • 0034081306 scopus 로고    scopus 로고
    • Suggestions for the nomenclature of human alleles: Relevance to ecogenetics, pharmacogenetics and molecular epidemiology
    • Nebert D.W. Suggestions for the nomenclature of human alleles: relevance to ecogenetics, pharmacogenetics and molecular epidemiology. Pharmacogenomics. 10:1999;279-290
    • (1999) Pharmacogenomics , vol.10 , pp. 279-290
    • Nebert, D.W.1
  • 30
    • 0030922230 scopus 로고    scopus 로고
    • Padlock probes reveal single-nucleotide differences, parent of origin and in situ distribution of centromeric sequences in human chromosomes 13 and 21
    • Nilsson M., Krejci K., Koch J., Kwiatkowski M., Gustavsson P., Landegren U. Padlock probes reveal single-nucleotide differences, parent of origin and in situ distribution of centromeric sequences in human chromosomes 13 and 21. Nat. Genet. 16:1997;252-255
    • (1997) Nat. Genet. , vol.16 , pp. 252-255
    • Nilsson, M.1    Krejci, K.2    Koch, J.3    Kwiatkowski, M.4    Gustavsson, P.5    Landegren, U.6
  • 31
    • 0027478270 scopus 로고
    • Solid phase DNA minisequencing by an enzymatic luminometric inorganic pyrophosphate detection assay
    • Nyren P., Pettersson B., Uhlen M. Solid phase DNA minisequencing by an enzymatic luminometric inorganic pyrophosphate detection assay. Anal. Biochem. 208:1993;171-175
    • (1993) Anal. Biochem. , vol.208 , pp. 171-175
    • Nyren, P.1    Pettersson, B.2    Uhlen, M.3
  • 32
    • 0032548972 scopus 로고    scopus 로고
    • Genetic polymorphisms in human liver phenol sulfotransferases involved in the bioactivation of N-hydroxy derivatives of carcinogenic arylamines and heterocyclic amines
    • Ozawa S., Tang Y.-M., Yamazoe Y., Kato R., Lang N.P., Kadlubar F.F. Genetic polymorphisms in human liver phenol sulfotransferases involved in the bioactivation of N-hydroxy derivatives of carcinogenic arylamines and heterocyclic amines. Chemico-Biol. Interactions. 109:1998;237-248
    • (1998) Chemico-Biol. Interactions , vol.109 , pp. 237-248
    • Ozawa, S.1    Tang, Y.-M.2    Yamazoe, Y.3    Kato, R.4    Lang, N.P.5    Kadlubar, F.F.6
  • 33
    • 0032858714 scopus 로고    scopus 로고
    • Sulfating-activity and stability of cDNA-expressed allozymes of human phenol sulfotransferase, ST1A3*1 (213 Arg) and ST 1A3*2 (213 His), both of which exist in Japanese as well as Caucasians
    • Ozawa S., Shimidzu M. Sulfating-activity and stability of cDNA-expressed allozymes of human phenol sulfotransferase, ST1A3*1 (213 Arg) and ST 1A3*2 (213 His), both of which exist in Japanese as well as Caucasians. J. Biochem. 126:1999;271-277
    • (1999) J. Biochem. , vol.126 , pp. 271-277
    • Ozawa, S.1    Shimidzu, M.2
  • 35
    • 0030810721 scopus 로고    scopus 로고
    • Minisequencing: A specific tool for DNA analysis and diagnostics on oligonucleotide arrays
    • Pastinen T., Kurg A., Metspalu A., Peltonen L., Syvänen A.-S. Minisequencing: a specific tool for DNA analysis and diagnostics on oligonucleotide arrays. Genome Res. 7:1997;606-614
    • (1997) Genome Res. , vol.7 , pp. 606-614
    • Pastinen, T.1    Kurg, A.2    Metspalu, A.3    Peltonen, L.4    Syvänen, A.-S.5
  • 36
    • 0035147075 scopus 로고    scopus 로고
    • Robust and accurate single nucleotide polymorphism genotyping by dynamic allele-specific hybridization (DASH): Design criteria and assay validation
    • Prince J.A., Feuk L., Howell W.M., Jobs M., Emahazion T., Blennow K., Brookes A.J. Robust and accurate single nucleotide polymorphism genotyping by dynamic allele-specific hybridization (DASH): design criteria and assay validation. Genome Res. 11:2001;152-162
    • (2001) Genome Res. , vol.11 , pp. 152-162
    • Prince, J.A.1    Feuk, L.2    Howell, W.M.3    Jobs, M.4    Emahazion, T.5    Blennow, K.6    Brookes, A.J.7
  • 38
  • 39
    • 0035524458 scopus 로고    scopus 로고
    • Pharmacogenetics and cancer therapy
    • Relling M.V., Dervieux T. Pharmacogenetics and cancer therapy. Nature. 1:2001;99-108
    • (2001) Nature , vol.1 , pp. 99-108
    • Relling, M.V.1    Dervieux, T.2
  • 40
    • 0001442557 scopus 로고
    • Genetic analysis of amplified DNA with immobilized sequence-specific oligonucleotide probes
    • Saiki R.K., Walsh P.S., Levenson C.H., Erlich H.A. Genetic analysis of amplified DNA with immobilized sequence-specific oligonucleotide probes. Proc. Natl. Acad. Sci. USA. 86:1989;6230-6234
    • (1989) Proc. Natl. Acad. Sci. USA , vol.86 , pp. 6230-6234
    • Saiki, R.K.1    Walsh, P.S.2    Levenson, C.H.3    Erlich, H.A.4
  • 43
    • 0038639109 scopus 로고    scopus 로고
    • Association of E-cadherin gene 3′-UTR C/T polymorphism with calcium oxalate stone disease
    • Tsai F.-J., Wu H.-C., Chen H.-Y., Lu H.-F., Hsu C.-D., Chen W.-C. Association of E-cadherin gene 3′-UTR C/T polymorphism with calcium oxalate stone disease. Urol. Int. 70:2003;278-281
    • (2003) Urol. Int. , vol.70 , pp. 278-281
    • Tsai, F.-J.1    Wu, H.-C.2    Chen, H.-Y.3    Lu, H.-F.4    Hsu, C.-D.5    Chen, W.-C.6
  • 44
    • 0031983834 scopus 로고    scopus 로고
    • Multicolor molecular beacons for allele discrimination
    • Tyagi S., Bratu D.P., Kramer F.R. Multicolor molecular beacons for allele discrimination. Nat. Biotechnol. 16:1998;49-53
    • (1998) Nat. Biotechnol. , vol.16 , pp. 49-53
    • Tyagi, S.1    Bratu, D.P.2    Kramer, F.R.3
  • 45
    • 0029670262 scopus 로고    scopus 로고
    • Molecular beacons: Probes that fluoresce upon hybridization
    • Tyagi S., Kramer F.R. Molecular beacons: probes that fluoresce upon hybridization. Nat. Biotechnol. 14:1996;303-308
    • (1996) Nat. Biotechnol. , vol.14 , pp. 303-308
    • Tyagi, S.1    Kramer, F.R.2
  • 46
    • 7644241233 scopus 로고    scopus 로고
    • On-chip synthesis of extended, long-chain DNA by PCR. Biosensors 2002
    • Book of Abstracts. Kyoto, Japan, 15-17 May 2002.
    • von Nickisch-Rosenegk, M., Marschan, X., Andresen, D., Bier, F.F., 2002. On-chip synthesis of extended, long-chain DNA by PCR. Biosensors 2002. Book of Abstracts. The Seventh World Congress of Biosensors, Kyoto, Japan, 15-17 May 2002. pp. 1-1.38.
    • (2002) The Seventh World Congress of Biosensors , pp. 1-138
    • Von Nickisch-Rosenegk, M.1    Marschan, X.2    Andresen, D.3    Bier, F.F.4
  • 48
    • 0037713608 scopus 로고    scopus 로고
    • Rapid detection of the known SNPs of CYP2C9 using oligonucleotide microarray
    • Wen S.-Y., Wang H., Sun O.-J., Wang S.-Q. Rapid detection of the known SNPs of CYP2C9 using oligonucleotide microarray. World J. Gastroenterol. 9(6):2003;1342-1346
    • (2003) World J. Gastroenterol. , vol.9 , Issue.6 , pp. 1342-1346
    • Wen, S.-Y.1    Wang, H.2    Sun, O.-J.3    Wang, S.-Q.4
  • 49
    • 0042121256 scopus 로고    scopus 로고
    • Mfold web server for nucleic acid folding and hybridization prediction
    • Zuker M. Mfold web server for nucleic acid folding and hybridization prediction. Nucl. Acids Res. 31(13):2003;3406-3415
    • (2003) Nucl. Acids Res. , vol.31 , Issue.13 , pp. 3406-3415
    • Zuker, M.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.