Robust and accurate single nucleotide polymorphism genotyping by dynamic allele-specific hybridization (DASH): Design criteria and assay validation

Genome Research

Volumn 11, Issue 1, 2001, Pages 152-162

  Prince, Jonathan A ^a   Feuk, Lars ^a   Howell, W Mathias ^a   Jobs, Magnus ^a   Emahazion, Tesfai ^a   Blennow, Kaj ^b   Brookes, Anthony J ^a  

^a KAROLINSKA INSTITUTE   (Sweden)

^b UNIVERSITY OF GOTHENBURG   (Sweden)

Author keywords

[No Author keywords available]

Indexed keywords

PRIMER DNA;

ACCURACY; ARTICLE; ASSAY; CONTROLLED STUDY; COST; DYNAMIC ALLELE SPECIFIC HYBRIDIZATION; GENE AMPLIFICATION; GENE SEQUENCE; GENE STRUCTURE; GENOTYPE; HYBRIDIZATION; OLIGONUCLEOTIDE PROBE; POLYMERASE CHAIN REACTION; PREDICTION; PRIORITY JOURNAL; RELIABILITY; SCORING SYSTEM; SINGLE NUCLEOTIDE POLYMORPHISM; STANDARDIZATION; TECHNIQUE; TEMPERATURE; THERMODYNAMICS; VALIDATION PROCESS;

ALLELES; DNA; DNA PRIMERS; GENOTYPE; GUIDELINES; HETEROZYGOTE DETECTION; HOMOZYGOTE; HUMANS; NUCLEIC ACID CONFORMATION; NUCLEIC ACID HYBRIDIZATION; POLYMERASE CHAIN REACTION; POLYMORPHISM, RESTRICTION FRAGMENT LENGTH; POLYMORPHISM, SINGLE NUCLEOTIDE; REPRODUCIBILITY OF RESULTS; RESEARCH DESIGN; SENSITIVITY AND SPECIFICITY;

EID: 0035147075     PISSN: 10889051     EISSN: None     Source Type: Journal    
DOI: 10.1101/gr.150201     Document Type: Article

References (21)

1. No association between the α2-macroglobulin (A2M) deletion and Alzheimer's disease, and no change in A2M mRNA, protein, or protein expression
2. The Essence of SNPs
3. HGBASE: A database of SNPs and other variations in and around human genes
4. Sequence diversity in 36 candidate genes for cardiovascular disorders
5. Characterization of single-nucleotide polymorphisms in coding regions of human genes
6. Relaxation kinetics of dimer formation by self complementary oligonucleotides
7. Identification of 167 polymorphisms in 88 genes from candidate neurodegeneration pathways
8. Dynamic allele-specific hybridization. A new method for scoring single nucleotide polymorphisms
9. Theory of thermal transitions in low molecular weight RNA chains
10. Multiplex genotype determination at a DNA sequence polymorphism cluster in the human immunoglobulin heavy-chain region
11. Drug firms to create public database of genetic mutations
12. Mining SNPs from EST databases
13. Product differentiation by analysis of DNA melting curves during the polymerase chain reaction
14. Stability and properties of double and triple helices: Dramatic effects of RNA or DNA backbone composition
15. A unified view of polymer, dumbbell, and oligonucleotide DNA nearest-neighbor thermodynamics
16. dbSNP: A database of single nucleotide polymorphisms
17. Population variation of human mtDNA control region sequences detected by enzymatic amplification and sequence-specific oligonucleotide probes
18. Detection of point mutations in human genes by the solid-phase minisequencing method
19. Overlapping genomic sequences: A treasure trove of single-nucleotide polymorphisms
20. Large-scale identification, mapping, and genotyping of single-nucleotide polymorphisms in the human genome
21. Proposed nomenclature of apoE isoproteins, apoE genotypes, and phenotypes