-
1
-
-
0036794074
-
The SBP2 and 15.5 kD/Snu13p proteins share the same RNA binding domain: Identification of SBP2 amino acids important to SECIS RNA binding
-
Allmang C, Carbon P, Krol A. 2002. The SBP2 and 15.5 kD/Snu13p proteins share the same RNA binding domain: Identification of SBP2 amino acids important to SECIS RNA binding. RNA 8: 1308-1318.
-
(2002)
RNA
, vol.8
, pp. 1308-1318
-
-
Allmang, C.1
Carbon, P.2
Krol, A.3
-
2
-
-
0034637111
-
The complete atomic structure of the large ribosomal subunit at 2.4 Å resolution
-
DOI 10.1126/science.289.5481.905
-
Ban N, Nissen P, Hansen J, Moore PB, Steitz JA. 2000. The complete atomic structure of the large ribosomal subunit at 2.4 Å resolution. Science 289: 905-920. (Pubitemid 30659939)
-
(2000)
Science
, vol.289
, Issue.5481
, pp. 905-920
-
-
Ban, N.1
Nissen, P.2
Hansen, J.3
Moore, P.B.4
Steitz, T.A.5
-
3
-
-
39049164474
-
The Hsp90 chaperone controls the biogenesis of L7Ae RNPs through conserved machinery
-
DOI 10.1083/jcb.200708110
-
Boulon S, Marmier-Gourrier N, Pradet-Balade B, Wurth L, Verheggen C, Jady BE, Rothe B, Pescia C, Robert MC, Kiss T, et al. 2008. The Hsp90 chaperone controls the biogenesis of L7Ae RNPs through conserved machinery. J Cell Biol 180: 579-595. (Pubitemid 351240705)
-
(2008)
Journal of Cell Biology
, vol.180
, Issue.3
, pp. 579-595
-
-
Boulon, S.1
Marmier-Gourrier, N.2
Pradet-Balade, B.3
Wurth, L.4
Verheggen, C.5
Jady, B.E.6
Rothe, B.7
Pescia, C.8
Robert, M.-C.9
Kiss, T.10
Bardoni, B.11
Krol, A.12
Branlant, C.13
Allmang, C.14
Bertrand, E.15
Charpentier, B.16
-
4
-
-
0037099680
-
Site-specific cross-linking analyses reveal an asymmetric protein distribution for a box C/D snoRNP
-
DOI 10.1093/emboj/cdf376
-
Cahill NM, Friend K, Speckman W, Li ZH, Terns RM, Terns MP, Steitz JA. 2002. Site-specific cross-linking analyses reveal an asymmetric protein distribution for a box C/D snoRNP. EMBO J 21: 3816-3828. (Pubitemid 34787054)
-
(2002)
EMBO Journal
, vol.21
, Issue.14
, pp. 3816-3828
-
-
Cahill, N.M.1
Friend, K.2
Speckmann, W.3
Li, Z.-H.4
Terns, R.M.5
Terns, M.P.6
Steitz, J.A.7
-
5
-
-
4444326475
-
The archaeal sRNA binding protein L7Ae has a 3D structure very similar to that of its eukaryal counterpart while having a broader RNA-binding specificity
-
DOI 10.1016/j.jmb.2004.07.046, PII S0022283604008745
-
Charron C, Manival X, Clery A, Senty-Segault V, Charpentier B, Marmier-Gourrier N, Branlant C, Aubry A. 2004. The archaeal sRNA binding protein L7Ae has a 3D structure very similar to that of its eukaryal counterpart while having a broader RNA-binding specificity. J Mol Biol 342: 757-773. (Pubitemid 39165648)
-
(2004)
Journal of Molecular Biology
, vol.342
, Issue.3
, pp. 757-773
-
-
Charron, C.1
Manival, X.2
Clery, A.3
Senty-Segault, V.4
Charpentier, B.5
Marmier-Gourrier, N.6
Branlant, C.7
Aubry, A.8
-
6
-
-
34247894065
-
An improved definition of the RNA-binding specificity of SECIS-binding protein 2, an essential component of the selenocysteine incorporation machinery
-
DOI 10.1093/nar/gkm066
-
Clery A, Bourguignon-Igel V, Allmang C, Krol A, Branlant C. 2007. An improved definition of the RNA-binding specificity of SECIS-binding protein 2, an essential component of the selenocysteine incorporation machinery. Nucleic Acids Res 35: 1868-1884. (Pubitemid 47061656)
-
(2007)
Nucleic Acids Research
, vol.35
, Issue.6
, pp. 1868-1884
-
-
Clery, A.1
Bourguignon-Igel, V.2
Allmang, C.3
Krol, A.4
Branlant, C.5
-
7
-
-
0034999985
-
A guided tour: Small RNA function in Aarchaea
-
DOI 10.1046/j.1365-2958.2001.02381.x
-
Dennis PP, Omer A, Lowe T. 2001. A guided tour: Small RNA function in Archaea. Mol Microbiol 40: 509-519. (Pubitemid 32453106)
-
(2001)
Molecular Microbiology
, vol.40
, Issue.3
, pp. 509-519
-
-
Dennis, P.P.1
Omer, A.2
Lowe, T.3
-
8
-
-
1642458391
-
Analysis of Snu13p mutations reveals differential interactions with the U4 snRNA and U3 snoRNA
-
Dobbyn HC, O'Keefe RT. 2004. Analysis of Snu13p mutations reveals differential interactions with the U4 snRNA and U3 snoRNA. RNA 10: 308-320.
-
(2004)
RNA
, vol.10
, pp. 308-320
-
-
Dobbyn, H.C.1
O'Keefe, R.T.2
-
9
-
-
0030976931
-
An evolutionarily conserved U5 snRNP-specific protein is a GTP-binding factor closely related to the ribosomal translocase EF-2
-
DOI 10.1093/emboj/16.13.4092
-
Fabrizio P, Laggerbauer B, Lauber J, Lane WS, Lührmann R. 1997. An evolutionarily conserved U5 snRNP-specific protein is a GTP-binding factor closely related to the ribosomal translocase EF-2. EMBO J 16: 4092-4106. (Pubitemid 27281024)
-
(1997)
EMBO Journal
, vol.16
, Issue.13
, pp. 4092-4106
-
-
Fabrizio, P.1
Laggerbauer, B.2
Lauber, J.3
Lane, W.S.4
Luhrmann, R.5
-
10
-
-
33748460634
-
Assembly of the Archaeal Box C/D sRNP Can Occur via Alternative Pathways and Requires Temperature-facilitated sRNA Remodeling
-
DOI 10.1016/j.jmb.2006.07.091, PII S0022283606009910
-
Gagnon KT, Zhang X, Agris PF, Maxwell ES. 2006. Assembly of the archaeal box C/D sRNP can occur via alternative pathways and requires temperature-facilitated sRNA remodeling. J Mol Biol 362: 1025-1042. (Pubitemid 44353524)
-
(2006)
Journal of Molecular Biology
, vol.362
, Issue.5
, pp. 1025-1042
-
-
Gagnon, K.T.1
Zhang, X.2
Agris, P.F.3
Maxwell, E.S.4
-
11
-
-
84889450956
-
The Box C/D RNPS: Evolutionarily ancient nucleotide modification complexes
-
ed. HC Smith Wiley, Hoboken, NJ
-
Gagnon KT, Zhang X, Maxwell ES. 2008. The Box C/D RNPS: Evolutionarily ancient nucleotide modification complexes. In The Box C/D RNPS: Evolutionarily ancient nucleotide modification complexes (ed. HC Smith), pp. 311-339. Wiley, Hoboken, NJ.
-
(2008)
The Box C/D RNPS: Evolutionarily Ancient Nucleotide Modification Complexes
, pp. 311-339
-
-
Gagnon, K.T.1
Zhang, X.2
Maxwell, E.S.3
-
12
-
-
2342638215
-
Structure of protein L7Ae bound to a K-turn derived from an archaeal box H/ACA sRNA at 1.8 Å resolution
-
DOI 10.1016/j.str.2004.03.015, PII S0969212604000966
-
Hamma T, Ferré-D'Amaré AR. 2004. Structure of protein L7Ae bound to a K-turn derived from an archaeal box H/ACA sRNA at 1.8 Å resolution. Structure 12: 893-903. (Pubitemid 38595777)
-
(2004)
Structure
, vol.12
, Issue.5
, pp. 893-903
-
-
Hamma, T.1
Ferre-D'Amare, A.R.2
-
13
-
-
0035394728
-
Accumulation of H/ACA snoRNPs depends on the integrity of the conserved central domain of the RNA-binding protein Nhp2p
-
Henras A, Dez C, Noaillac-Depeyre J, Henry Y, Caizergues-Ferrer M. 2001. Accumulation of H/ACA snoRNPs depends on the integrity of the conserved central domain of the RNA-binding protein Nhp2p. Nucleic Acids Res 29: 2733-2746. (Pubitemid 32685036)
-
(2001)
Nucleic Acids Research
, vol.29
, Issue.13
, pp. 2733-2746
-
-
Henras, A.1
Dez, C.2
Noaillac-Depeyre, J.3
Henry, Y.4
Caizergues-Ferrer, M.5
-
14
-
-
0242614611
-
Sequence and structural elements of methylation guide snoRNAs essential for site-specific ribose methylation of pre-rRNA
-
DOI 10.1093/emboj/17.3.797
-
Kiss-Laszlo Z, Henry Y, Kiss T. 1998. Sequence and structural elements of methylation guide snoRNAs essential for site-specific ribose methylation of pre-rRNA. EMBO J 17: 797-807. (Pubitemid 28062058)
-
(1998)
EMBO Journal
, vol.17
, Issue.3
, pp. 797-807
-
-
Kiss-Laszlo, Z.1
Henry, Y.2
Kiss, T.3
-
16
-
-
0028225137
-
A novel RNA-binding motif in omnipotent suppressors of translation termination, ribosomal proteins and a ribosome modification enzyme?
-
Koonin EV, Bork P, Sander C. 1994. A novel RNA-binding motif in omnipotent suppressors of translation termination, ribosomal proteins and a ribosome modification enzyme? Nucleic Acids Res 22: 2166-2167.
-
(1994)
Nucleic Acids Res
, vol.22
, pp. 2166-2167
-
-
Koonin, E.V.1
Bork, P.2
Sander, C.3
-
17
-
-
0037082424
-
Archaeal ribosomal protein L7 is a functional homolog of the eukaryotic 15.5kD/Snu13p snoRNP core protein
-
Kuhn J, Tran E, Maxwell ES. 2002. Archaeal ribosomal protein L7 is a functional homolog of the eukaryotic 15.5kD/Snu13p snoRNP core protein. Nucleic Acids Res 30: 931-941. (Pubitemid 34679661)
-
(2002)
Nucleic Acids Research
, vol.30
, Issue.4
, pp. 931-941
-
-
Kuhn, J.F.1
Tran, E.J.2
Maxwell, E.S.3
-
18
-
-
0032785638
-
Copper ion inducible and repressible promoter systems in yeast
-
DOI 10.1016/S0076-6879(99)06010-3
-
Labbe S, Thiele DJ. 1999. Copper inducible and repressible promoter systems in yeast. Methods Enzymol 306: 145-153. (Pubitemid 29356829)
-
(1999)
Methods in Enzymology
, vol.306
, pp. 145-153
-
-
Labbe, S.1
Thiele, D.J.2
-
19
-
-
33748947672
-
Crystal structure of an H/ACA box ribonucleoprotein particle
-
DOI 10.1038/nature05151, PII NATURE05151
-
Li L, Ye K. 2006. Crystal structure of an H/ACA box ribonucleoprotein particle. Nature 443: 302-307. (Pubitemid 44435144)
-
(2006)
Nature
, vol.443
, Issue.7109
, pp. 302-307
-
-
Li, L.1
Ye, K.2
-
20
-
-
34147095881
-
Binding of the human Prp31 Nop domain to a composite RNA-protein platform in U4 snRNP
-
DOI 10.1126/science.1137924
-
Liu S, Li P, Dybkov O, Nottrott S, Hartmuth S, Lührmann R, Carlomango T, Wahl MC. 2007. Binding of the human Prp31 Nop domain to a composite RNA-protein platform in U4 snRNP. Science 316: 115-120. (Pubitemid 46559531)
-
(2007)
Science
, vol.316
, Issue.5821
, pp. 115-120
-
-
Liu, S.1
Li, P.2
Dybkov, O.3
Nottrott, S.4
Hartmuth, K.5
Luhrmann, R.6
Carlomagno, T.7
Wahl, M.C.8
-
21
-
-
0032710024
-
A novel loop-loop recognition motif in the yeast ribosomal protein L30 autoregulatory RNA complex
-
Mao H, White SA, Williamson JR. 1999. A novel loop-loop recognition motif in the yeast ribosomal protein L30 autoregulatory RNA complex. Nat Struct Biol 6: 1139-1147.
-
(1999)
Nat Struct Biol
, vol.6
, pp. 1139-1147
-
-
Mao, H.1
White, S.A.2
Williamson, J.R.3
-
22
-
-
2342475659
-
Molecular basis of box C/D RNA-protein interactions: Cocrystal structure of archaeal L7Ae and a box C/D RNA
-
DOI 10.1016/j.str.2004.02.033, PII S0969212604001169
-
Moore T, Zhang Y, Fenley MO, Li H. 2004. Molecular basis of box C/D RNA-protein interactions: Cocrystal structure of archaeal L7Ae and a box C/D RNA. Structure 12: 807-818. (Pubitemid 38595769)
-
(2004)
Structure
, vol.12
, Issue.5
, pp. 807-818
-
-
Moore, T.1
Zhang, Y.2
Fenley, M.O.3
Li, H.4
-
23
-
-
29144449192
-
The K-loop, a general feature of the Pyrococcus C/D guide RNAs, is an RNA structural motif related to the K-turn
-
DOI 10.1093/nar/gki962
-
Nolivos S, Carpousis AJ, Clouet-d'Orval B. 2005. The K-loop, a general feature of the Pyrococcus C/D guide RNAs, is an RNA structural motif related to the K-turn. Nucleic Acids Res 33: 6507-6514. (Pubitemid 41806414)
-
(2005)
Nucleic Acids Research
, vol.33
, Issue.20
, pp. 6507-6514
-
-
Nolivos, S.1
Carpousis, A.J.2
Clouet-D'Orval, B.3
-
24
-
-
0037117533
-
In vitro reconstitution and activity of a C/D box methylation guide ribonucleoprotein complex
-
Omer A, Ziesche S, Ebhardt H, Dennis PP. 2002. In vitro reconstitution and activity of a C/D box methylation guide ribonucleoprotein complex. Proc Natl Acad Sci 99: 5289-5294.
-
(2002)
Proc Natl Acad Sci
, vol.99
, pp. 5289-5294
-
-
Omer, A.1
Ziesche, S.2
Ebhardt, H.3
Dennis, P.P.4
-
25
-
-
20544468675
-
Structural comparison of yeast snoRNP and spliceosomal protein Snu13p with its homologs
-
DOI 10.1016/j.bbrc.2005.05.141, PII S0006291X05010776
-
Oruganti S, Zhang Y, Li H. 2005. Structural comparison of yeast snoRNP and spliceosomal protein Snu13p with its homologs. Biochem Biophys Res Commun 333: 550-554. (Pubitemid 40848326)
-
(2005)
Biochemical and Biophysical Research Communications
, vol.333
, Issue.2
, pp. 550-554
-
-
Oruganti, S.V.1
Zhang, Y.2
Li, H.3
-
26
-
-
0037324527
-
Binding of L7Ae protein to the K-turn of archaeal snoRNAs: A shared RNA binding motif for C/D and H/ACA box snoRNAs in Archaea
-
DOI 10.1093/nar/gkg175
-
Rozhdestvensky TS, Tang TH, Tchirkova IV, Brosius J, Bachellerie JP, Huttenhofer A. 2003. Binding of L7Ae protein to the K-turn of archaeal snoRNAs: A shared RNA binding motif for C/D and H/ACA box snoRNAs in Archaea. Nucleic Acids Res 31: 869-877. (Pubitemid 36240424)
-
(2003)
Nucleic Acids Research
, vol.31
, Issue.3
, pp. 869-877
-
-
Rozhdestvensky, T.S.1
Tang, T.H.2
Tchirkova, I.V.3
Brosius, J.4
Bachellerie, J.-P.5
Huttenhofer, A.6
-
27
-
-
12744255164
-
Ribosomal protein L7a binds RNA through two distinct RNA-binding domains
-
Russo G, Cuccurese M, Monti G, Russo A, Amoresano A, Peitropaolo C. 2005. Ribosomal protein L7a binds RNA through two distinct RNA-binding domains. Biochem J 385: 289-299.
-
(2005)
Biochem J
, vol.385
, pp. 289-299
-
-
Russo, G.1
Cuccurese, M.2
Monti, G.3
Russo, A.4
Amoresano, A.5
Peitropaolo, C.6
-
28
-
-
37349039360
-
Functional implications for a prototypical K-turn binding protein from structural and dynamical studies of 15.5K
-
Soss SE, Flynn PF. 2007. Functional implications for a prototypical K-turn binding protein from structural and dynamical studies of 15.5K. Biochemistry 46: 14979-14986.
-
(2007)
Biochemistry
, vol.46
, pp. 14979-14986
-
-
Soss, S.E.1
Flynn, P.F.2
-
29
-
-
0036773686
-
Exclusive interaction of the 15.5kD protein with the terminal box C/D motif of a methylation guide snoRNP
-
Szewczak LB, DeGregorio SJ, Strobel SA, Steitz JA. 2002. Exclusive interaction of the 15.5kD protein with the terminal box C/D motif of a methylation guide snoRNP. Chem Biol 9: 1095-1107.
-
(2002)
Chem Biol
, vol.9
, pp. 1095-1107
-
-
Szewczak, L.B.1
Degregorio, S.J.2
Strobel, S.A.3
Steitz, J.A.4
-
30
-
-
0043026864
-
Efficient RNA 2′-O-methylation requires juxtaposed and symmetrically assembled archaeal box C/D and C′/D′ RNPs
-
DOI 10.1093/emboj/cdg368
-
Tran EJ, Zhang X, Maxwell ES. 2003. Efficient RNA 2′-O-methylation requires juxtaposed and symmetrically assembled archaeal box C/D and C′/D′ RNPs. EMBO J 22: 3930-3940. (Pubitemid 36975719)
-
(2003)
EMBO Journal
, vol.22
, Issue.15
, pp. 3930-3940
-
-
Tran, E.J.1
Zhang, X.2
Maxwell, E.S.3
-
31
-
-
13944251291
-
Conserved spacing between the box C/D and C′/D′ RNPs of the archaeal box C/D sRNP complex is required for efficient 2′-O-methylation of target RNAs
-
DOI 10.1261/rna.7223405
-
Tran EJ, Zhang X, Lackey L, Maxwell ES. 2005. Conserved spacing between the box C/D and C′/D′ RNPs of the archaeal box C/D sRNP complex is required for efficient 2′-O-methylation of target RNAs. RNA 11: 285-293. (Pubitemid 40270821)
-
(2005)
RNA
, vol.11
, Issue.3
, pp. 285-293
-
-
Tran, E.1
Zhang, X.2
Lackey, L.3
Maxwell, E.S.4
-
32
-
-
0034509631
-
Crystal structure of the spliceosomal 15.5kD protein bound to a U4 snRNA fragment
-
DOI 10.1016/S1097-2765(00)00131-3
-
Vidovic I, Nottrot S, Hartmuth K, Lührmann R, Ficner R. 2000. Crystal structure of the spliceosomal 15.5kD protein bound to a U4 snRNA fragment. Mol Cell 6: 1331-1342. (Pubitemid 32045926)
-
(2000)
Molecular Cell
, vol.6
, Issue.6
, pp. 1331-1342
-
-
Vidovic, I.1
Nottrott, S.2
Hartmuth, K.3
Luhrmann, R.4
Ficner, R.5
-
33
-
-
2442542173
-
Architecture and assembly of mammalian H/ACA small nucleolar and telomerase ribonucleoproteins
-
DOI 10.1038/sj.emboj.7600181
-
Wang C, Meier UT. 2004. Architecture and assembly of mammalian H/ACA small nucleolar and telomerase ribonucleoproteins. EMBO J 23: 1857-1867. (Pubitemid 38649648)
-
(2004)
EMBO Journal
, vol.23
, Issue.8
, pp. 1857-1867
-
-
Wang, C.1
Meier, U.T.2
-
34
-
-
0034721649
-
A common core RNP structure shared between the small nucleolar box C/D RNPs and the spliceosomal U4 snRNP
-
Watkins NJ, Segault V, Charpentier B, Nottrott S, Fabrizio P, Bachi A, Wilm M, Rosbash M, Branlant C, Lührmann R. 2000. A common core RNP structure shared between the small nucleolar box C/D RNPs and the spliceosomal U4 snRNP. Cell 103: 457-466.
-
(2000)
Cell
, vol.103
, pp. 457-466
-
-
Watkins, N.J.1
Segault, V.2
Charpentier, B.3
Nottrott, S.4
Fabrizio, P.5
Bachi, A.6
Wilm, M.7
Rosbash, M.8
Branlant, C.9
Lührmann, R.10
-
35
-
-
2342599644
-
Mutual interactions between subunits of the human RNase MRP ribonucleoprotein complex
-
Welting TJM, van Venrooij WJ, Pruijn GJM. 2004. Mutual interactions between subunits of the human RNase MRP ribonucleoprotein complex. Nucleic Acids Res 32: 2138-2146.
-
(2004)
Nucleic Acids Res
, vol.32
, pp. 2138-2146
-
-
Welting, T.J.M.1
Van Venrooij, W.J.2
Pruijn, G.J.M.3
-
36
-
-
33646890462
-
The coiled-coil domain of the Nop56/58 core protein is dispensable for sRNP assembly but is critical for archaeal box C/D sRNP-guided nucleotide methylation
-
DOI 10.1261/rna.2230106
-
Zhang X, Champion EA, Tran E, Brown BA II, Baserga SJ, Maxwell ES. 2006. The coiled-coil domain of the Nop56/58 core protein is dispensable for sRNP assembly but is critical for archaeal box C/D sRNP-guided nucleotide methylation. RNA 12: 1092-1103. (Pubitemid 43788127)
-
(2006)
RNA
, vol.12
, Issue.6
, pp. 1092-1103
-
-
Zhang, X.1
Champion, E.A.2
Tran, E.J.3
Brown II, B.A.4
Baserga, S.J.5
Stuart Maxwell, E.6
|