메뉴 건너뛰기




Volumn 22, Issue 15, 2003, Pages 3930-3940

Efficient RNA 2′-O-methylation requires juxtaposed and symmetrically assembled archaeal box C/D and C′/D′ RNPs

Author keywords

Archaea; Box C D RNP; Ribonucleotide methylation; SnoRNA; SRNA

Indexed keywords

CORE PROTEIN; FIBRILLARIN; RECOMBINANT PROTEIN; RIBONUCLEOPROTEIN; RIBONUCLEOTIDE; RNA;

EID: 0043026864     PISSN: 02614189     EISSN: None     Source Type: Journal    
DOI: 10.1093/emboj/cdg368     Document Type: Article
Times cited : (97)

References (34)
  • 2
    • 0028197030 scopus 로고
    • Fibrillarin-like proteins occur in the domain Archaea
    • Amiri, K. (1994) Fibrillarin-like proteins occur in the domain Archaea. J. Bacteriol., 176, 2124-2127.
    • (1994) J. Bacteriol. , vol.176 , pp. 2124-2127
    • Amiri, K.1
  • 4
    • 0029919357 scopus 로고    scopus 로고
    • Processing of the intron-encoded U16 and U18 snoRNAs: The conserved C and D boxes control both the processing reaction and the stability of the mature snoRNA
    • Caffarelli, E., Fatica, A., Prislei, S., DeGregorio, E., Fragapane, P. and Bozzoni, I. (1996) Processing of the intron-encoded U16 and U18 snoRNAs: the conserved C and D boxes control both the processing reaction and the stability of the mature snoRNA. EMBO J., 15, 1121-1131.
    • (1996) EMBO J. , vol.15 , pp. 1121-1131
    • Caffarelli, E.1    Fatica, A.2    Prislei, S.3    DeGregorio, E.4    Fragapane, P.5    Bozzoni, I.6
  • 5
    • 0037099680 scopus 로고    scopus 로고
    • Site-specific cross-linking analyses reveal an asymmetric distribution for a box C/D snoRNP
    • Cahill, N., Friend, K., Speckman, W., Li, Z., Terns, R., Terns, M. and Steitz, J. (2002) Site-specific cross-linking analyses reveal an asymmetric distribution for a box C/D snoRNP. EMBO J., 21, 3816-3828.
    • (2002) EMBO J. , vol.21 , pp. 3816-3828
    • Cahill, N.1    Friend, K.2    Speckman, W.3    Li, Z.4    Terns, R.5    Terns, M.6    Steitz, J.7
  • 6
    • 0029826456 scopus 로고    scopus 로고
    • Processing of fibrillarin-associated snoRNAs from pre-mRNA introns: An exonucleolytic process exclusively directed by the common stem-box terminal structure
    • Cavaille, J. and Bachellerie, J.P. (1996) Processing of fibrillarin-associated snoRNAs from pre-mRNA introns: an exonucleolytic process exclusively directed by the common stem-box terminal structure. Biochimie, 78, 443-456.
    • (1996) Biochimie , vol.78 , pp. 443-456
    • Cavaille, J.1    Bachellerie, J.P.2
  • 7
    • 0032052773 scopus 로고    scopus 로고
    • SnoRNA-guided ribose methylation of rRNA: Structural features of the guide RNA duplex influencing the extent of the reaction
    • Cavaille, J. and Bachellerie, J.P. (1998) SnoRNA-guided ribose methylation of rRNA: structural features of the guide RNA duplex influencing the extent of the reaction. Nucleic Acids Res., 26, 1576-1587.
    • (1998) Nucleic Acids Res. , vol.26 , pp. 1576-1587
    • Cavaille, J.1    Bachellerie, J.P.2
  • 8
    • 0034999985 scopus 로고    scopus 로고
    • A guided tour: Small RNA function in Archaea
    • Dennis, P., Omer, A. and Lowe, T. (2001) A guided tour: small RNA function in Archaea. Mol. Microbiol., 40, 509-519.
    • (2001) Mol. Microbiol. , vol.40 , pp. 509-519
    • Dennis, P.1    Omer, A.2    Lowe, T.3
  • 9
    • 0036786431 scopus 로고    scopus 로고
    • Purified box C/D snoRNPs are able to reproduce site-specific 2′-O-methylation of target RNA in vitro
    • Galardi, S., Fatica, A., Bachi, A., Scaloni, A., Presutti, C. and Bozzoni, I. (2002) Purified box C/D snoRNPs are able to reproduce site-specific 2′-O-methylation of target RNA in vitro. Mol. Cell. Biol., 22, 6663-6668.
    • (2002) Mol. Cell. Biol. , vol.22 , pp. 6663-6668
    • Galardi, S.1    Fatica, A.2    Bachi, A.3    Scaloni, A.4    Presutti, C.5    Bozzoni, I.6
  • 10
    • 0034615782 scopus 로고    scopus 로고
    • Archaeal homologs of eukaryotic methylation guide small nucleolar RNAs: Lessons from the Pyrococcus genomes
    • Gaspin, C., Cavaille, J., Erauso, G. and Bachellerie, J.-P. (2000) Archaeal homologs of eukaryotic methylation guide small nucleolar RNAs: lessons from the Pyrococcus genomes. J. Mol. Biol., 297, 895-906.
    • (2000) J. Mol. Biol. , vol.297 , pp. 895-906
    • Gaspin, C.1    Cavaille, J.2    Erauso, G.3    Bachellerie, J.-P.4
  • 11
    • 0035253857 scopus 로고    scopus 로고
    • A small nucleolar guide RNA functions both in 2′-O-ribose methylation and pseudouridylation of the U5 spliceosomal RNA
    • Jady, B. and Kiss, T. (2001) A small nucleolar guide RNA functions both in 2′-O-ribose methylation and pseudouridylation of the U5 spliceosomal RNA. EMBO J., 20, 541-551.
    • (2001) EMBO J. , vol.20 , pp. 541-551
    • Jady, B.1    Kiss, T.2
  • 12
    • 0037133942 scopus 로고    scopus 로고
    • Small nucleolar RNAs: An abundant group of non-coding RNAs with diverse cellular functions
    • Kiss, T. (2002) Small nucleolar RNAs: an abundant group of non-coding RNAs with diverse cellular functions. Cell, 109, 145-148.
    • (2002) Cell , vol.109 , pp. 145-148
    • Kiss, T.1
  • 13
    • 0242614611 scopus 로고    scopus 로고
    • Sequence and structural elements of methylation guide snoRNAs essential for site-specific ribose methylation of pre-rRNA
    • Kiss-Laszlo, Z., Henry, Y. and Kiss, T. (1998) Sequence and structural elements of methylation guide snoRNAs essential for site-specific ribose methylation of pre-rRNA. EMBO J., 17, 797-807.
    • (1998) EMBO J. , vol.17 , pp. 797-807
    • Kiss-Laszlo, Z.1    Henry, Y.2    Kiss, T.3
  • 14
    • 0035423087 scopus 로고    scopus 로고
    • The kink-turn: A new RNA secondary structure motif
    • Klein, D., Schmeing, T., Moore, P. and Steitz, T. (2001) The kink-turn: a new RNA secondary structure motif. EMBO J., 20, 4214-4221.
    • (2001) EMBO J. , vol.20 , pp. 4214-4221
    • Klein, D.1    Schmeing, T.2    Moore, P.3    Steitz, T.4
  • 15
    • 0037082424 scopus 로고    scopus 로고
    • Archaeal ribosomal protein L7 is a functional homolog of the eukaryotic 15.5kD/Snu13p snoRNP core protein
    • Kuhn, J., Tran, E. and Maxwell, E.S. (2002) Archaeal ribosomal protein L7 is a functional homolog of the eukaryotic 15.5kD/Snu13p snoRNP core protein. Nucleic Acids Res., 30, 931-941.
    • (2002) Nucleic Acids Res. , vol.30 , pp. 931-941
    • Kuhn, J.1    Tran, E.2    Maxwell, E.S.3
  • 16
    • 0033053360 scopus 로고    scopus 로고
    • Nop58p is a common component of the box C+D snoRNPs that is required for snoRNA stability
    • Lafontaine, D. and Tollervey, D. (1999) Nop58p is a common component of the box C+D snoRNPs that is required for snoRNA stability. RNA, 5, 455-467.
    • (1999) RNA , vol.5 , pp. 455-467
    • Lafontaine, D.1    Tollervey, D.2
  • 17
    • 0034126359 scopus 로고    scopus 로고
    • Synthesis and assembly of the box C+D small nucleolar RNPs
    • Lafontaine, D. and Tollervey, D. (2000) Synthesis and assembly of the box C+D small nucleolar RNPs. Mol. Cell. Biol., 20, 2650-2659.
    • (2000) Mol. Cell. Biol. , vol.20 , pp. 2650-2659
    • Lafontaine, D.1    Tollervey, D.2
  • 18
    • 0032502894 scopus 로고    scopus 로고
    • Crystal structure and evolution of a transfer RNA splicing enzyme
    • Li, H., Trotta, C. and Abelson, J. (1998) Crystal structure and evolution of a transfer RNA splicing enzyme. Science, 280, 279-284.
    • (1998) Science , vol.280 , pp. 279-284
    • Li, H.1    Trotta, C.2    Abelson, J.3
  • 19
    • 0034081813 scopus 로고    scopus 로고
    • Box C/D snoRNA-associated proteins: Two pairs of evolutionarily ancient proteins and possible links to replication and transcription
    • Newman, D., Kuhn, J., Shanab, G. and Maxwell, S. (2000) Box C/D snoRNA-associated proteins: two pairs of evolutionarily ancient proteins and possible links to replication and transcription. RNA, 6, 861-879.
    • (2000) RNA , vol.6 , pp. 861-879
    • Newman, D.1    Kuhn, J.2    Shanab, G.3    Maxwell, S.4
  • 21
    • 0037117533 scopus 로고    scopus 로고
    • In vitro reconstitution and activity of a C/D box methylation guide ribonucleoprotein complex
    • Omer, A., Ziesche, S., Ebhardt, H. and Dennis, P. (2002) In vitro reconstitution and activity of a C/D box methylation guide ribonucleoprotein complex. Proc. Natl Acad. Sci. USA, 99, 5289-5294.
    • (2002) Proc. Natl. Acad. Sci. USA , vol.99 , pp. 5289-5294
    • Omer, A.1    Ziesche, S.2    Ebhardt, H.3    Dennis, P.4
  • 22
    • 0036773686 scopus 로고    scopus 로고
    • Exclusive interaction of the 15.5 kD protein with the terminal box C/D motif of a methylation guide snoRNP
    • Szewczak, L.W., DeGregorio, S., Strobel, S. and Steitz, J. (2002) Exclusive interaction of the 15.5 kD protein with the terminal box C/D motif of a methylation guide snoRNP. Chem. Biol., 9, 1095-1107.
    • (2002) Chem. Biol. , vol.9 , pp. 1095-1107
    • Szewczak, L.W.1    DeGregorio, S.2    Strobel, S.3    Steitz, J.4
  • 23
    • 0037082426 scopus 로고    scopus 로고
    • RNomics in Archaea reveals a further link between splicing of archaeal introns and rRNA processing
    • Tang, T. et al. (2002) RNomics in Archaea reveals a further link between splicing of archaeal introns and rRNA processing. Nucleic Acids Res., 30, 921-930.
    • (2002) Nucleic Acids Res. , vol.30 , pp. 921-930
    • Tang, T.1
  • 24
    • 0036176517 scopus 로고    scopus 로고
    • Small nucleolar RNAs: Versatile transacting molecules of ancient evolutionary origin
    • Terns, M. and Terns, R. (2002) Small nucleolar RNAs: versatile transacting molecules of ancient evolutionary origin. Gene Expr., 10, 17-39.
    • (2002) Gene Expr. , vol.10 , pp. 17-39
    • Terns, M.1    Terns, R.2
  • 25
    • 16044369360 scopus 로고    scopus 로고
    • Small nucleolar RNAs guide ribosomal RNA methylation
    • Tollervey, D. (1996) Small nucleolar RNAs guide ribosomal RNA methylation. Science, 273, 1056-1057.
    • (1996) Science , vol.273 , pp. 1056-1057
    • Tollervey, D.1
  • 26
    • 0027536869 scopus 로고
    • Temperature-sensitive mutations demonstrate roles for yeast fibrillarin in pre-rRNA processing, pre-rRNA methylation and ribosome assembly
    • Tollervey, D., Lehtonen, H., Jansen, R., Kern, H. and Hurt, E.C. (1993) Temperature-sensitive mutations demonstrate roles for yeast fibrillarin in pre-rRNA processing, pre-rRNA methylation and ribosome assembly. Cell, 72, 443-457.
    • (1993) Cell , vol.72 , pp. 443-457
    • Tollervey, D.1    Lehtonen, H.2    Jansen, R.3    Kern, H.4    Hurt, E.C.5
  • 27
    • 0024394168 scopus 로고
    • U3, U8 and U13 comprise a new class of mammalian snRNPs localized in the cell nucleolus
    • Tyc, K. and Steitz, J. (1989) U3, U8 and U13 comprise a new class of mammalian snRNPs localized in the cell nucleolus. EMBO J., 8, 3113-3119.
    • (1989) EMBO J. , vol.8 , pp. 3113-3119
    • Tyc, K.1    Steitz, J.2
  • 28
    • 0032214692 scopus 로고    scopus 로고
    • Modification of U6 spliceosomal RNA is guided by other small RNAs
    • Tycowski, K., You, Z., Graham, P. and Steitz, J. (1998) Modification of U6 spliceosomal RNA is guided by other small RNAs. Mol. Cell, 2, 629-638.
    • (1998) Mol. Cell , vol.2 , pp. 629-638
    • Tycowski, K.1    You, Z.2    Graham, P.3    Steitz, J.4
  • 29
    • 0034509631 scopus 로고    scopus 로고
    • Crystal structure of the spliceosomal 15.5 kD protein bound to a U4 snRNA fragment
    • Vidovic, I., Nottrott, S., Hartmuth, K., Luhrmann, R. and Ficner, R. (2000) Crystal structure of the spliceosomal 15.5 kD protein bound to a U4 snRNA fragment. Mol. Cell, 6, 1331-1342.
    • (2000) Mol. Cell , vol.6 , pp. 1331-1342
    • Vidovic, I.1    Nottrott, S.2    Hartmuth, K.3    Luhrmann, R.4    Ficner, R.5
  • 30
    • 0034141555 scopus 로고    scopus 로고
    • Crystal structure of a fibrillarin homologue from Methanococcus jannaschii, a hyperthermophile, at 1.6 A resolution
    • Wang, H., Boisvert, D., Kim, K., Kim, R. and Kim, S.H. (2000) Crystal structure of a fibrillarin homologue from Methanococcus jannaschii, a hyperthermophile, at 1.6 A resolution. EMBO J., 19, 317-323.
    • (2000) EMBO J. , vol.19 , pp. 317-323
    • Wang, H.1    Boisvert, D.2    Kim, K.3    Kim, R.4    Kim, S.H.5
  • 31
    • 0029805781 scopus 로고    scopus 로고
    • Elements essential for processing intronic U14 snoRNA are located at the termini of the mature snoRNA sequence and include conserved nucleotide boxes C and D
    • Watkins, N., Leverette, R., Xia, L. Andrews, M. and Maxwell, S. (1996) Elements essential for processing intronic U14 snoRNA are located at the termini of the mature snoRNA sequence and include conserved nucleotide boxes C and D. RNA, 2, 118-133.
    • (1996) RNA , vol.2 , pp. 118-133
    • Watkins, N.1    Leverette, R.2    Xia, L.3    Andrews, M.4    Maxwell, S.5
  • 32
    • 0034721649 scopus 로고    scopus 로고
    • A common core RNP structure shared between the small nucleolar box C/D RNPs and the spliceosomal U4 snRNP
    • Watkins, N. et al. (2000) A common core RNP structure shared between the small nucleolar box C/D RNPs and the spliceosomal U4 snRNP. Cell, 103, 457-466.
    • (2000) Cell , vol.103 , pp. 457-466
    • Watkins, N.1
  • 33
    • 0036889385 scopus 로고    scopus 로고
    • Conserved stem II of the box C/D motif is essential for nucleolar localization and is required, along with the 15.5 K protein, for the hierarchical assembly of the box C/D snoRNP
    • Watkins, N., Dickmanns, A. and Luhrmann, R. (2002) Conserved stem II of the box C/D motif is essential for nucleolar localization and is required, along with the 15.5 K protein, for the hierarchical assembly of the box C/D snoRNP. Mol. Cell. Biol., 22, 8342-8352.
    • (2002) Mol. Cell. Biol. , vol.22 , pp. 8342-8352
    • Watkins, N.1    Dickmanns, A.2    Luhrmann, R.3
  • 34
    • 0038719826 scopus 로고    scopus 로고
    • RNomics in Drosophila melanogaster: Identification of 66 candidates for novel non-messenger RNAs
    • Yuan, G., Klambt, C., Bachellerie, J.P., Brosius, J. and Huttenhofer, A. (2003) RNomics in Drosophila melanogaster: identification of 66 candidates for novel non-messenger RNAs. Nucleic Acids Res., 31, 2495-2507.
    • (2003) Nucleic Acids Res. , vol.31 , pp. 2495-2507
    • Yuan, G.1    Klambt, C.2    Bachellerie, J.P.3    Brosius, J.4    Huttenhofer, A.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.