메뉴 건너뛰기




Volumn 10, Issue , 2009, Pages

A bi-dimensional genome scan for prolificacy traits in pigs shows the existence of multiple epistatic QTL

Author keywords

[No Author keywords available]

Indexed keywords

ANIMAL EXPERIMENT; ARTICLE; CHROMOSOME 13; CHROMOSOME 17; CONTROLLED STUDY; CROSS BREEDING; EPISTASIS; FEMALE; GENE INTERACTION; GENOME ANALYSIS; INHERITANCE; LINKAGE ANALYSIS; LITTER SIZE; MALE; NONHUMAN; PHENOTYPIC VARIATION; QUANTITATIVE TRAIT LOCUS MAPPING; REPRODUCTIVE SUCCESS; SINGLE NUCLEOTIDE POLYMORPHISM; SWINE; ANIMAL; CHROMOSOME MAP; GENETICS; GENOME; GENOTYPE; HUMAN; QUANTITATIVE TRAIT LOCUS;

EID: 75449118754     PISSN: None     EISSN: 14712164     Source Type: Journal    
DOI: 10.1186/1471-2164-10-636     Document Type: Article
Times cited : (42)

References (45)
  • 1
    • 0034523871 scopus 로고    scopus 로고
    • Single QTL effects, epistasis, and pleiotropy account for two-thirds of the phenotypic F-2 variance of growth and obesity in DU6i × DBA/2 mice
    • 10.1101/gr.GR1499R, 313074, 11116089
    • Brockmann GA, Kratzsch J, Haley CS, Renne U, Schwerin M, Karle S. Single QTL effects, epistasis, and pleiotropy account for two-thirds of the phenotypic F-2 variance of growth and obesity in DU6i × DBA/2 mice. Genome Research 2000, 10:1941-1957. 10.1101/gr.GR1499R, 313074, 11116089.
    • (2000) Genome Research , vol.10 , pp. 1941-1957
    • Brockmann, G.A.1    Kratzsch, J.2    Haley, C.S.3    Renne, U.4    Schwerin, M.5    Karle, S.6
  • 4
    • 24644490562 scopus 로고    scopus 로고
    • Simultaneous mapping of epistatic QTL in DU6i × DBA/2 mice
    • 10.1007/s00335-004-2425-4, 16151693
    • Carlborg O, Brockmann A, Haley CS. Simultaneous mapping of epistatic QTL in DU6i × DBA/2 mice. Mammalian Genome 2005, 16:481-494. 10.1007/s00335-004-2425-4, 16151693.
    • (2005) Mammalian Genome , vol.16 , pp. 481-494
    • Carlborg, O.1    Brockmann, A.2    Haley, C.S.3
  • 5
    • 0037350268 scopus 로고    scopus 로고
    • A global search reveals epistatic interaction between QTL for early growth in the chicken
    • 10.1101/gr.528003, 430275, 12618372
    • Carlborg O, Kerje S, Schütz K, Jacobsson L, Jensen P, Andersson L. A global search reveals epistatic interaction between QTL for early growth in the chicken. Genome Research 2003, 13:413-421. 10.1101/gr.528003, 430275, 12618372.
    • (2003) Genome Research , vol.13 , pp. 413-421
    • Carlborg, O.1    Kerje, S.2    Schütz, K.3    Jacobsson, L.4    Jensen, P.5    Andersson, L.6
  • 6
    • 4344693087 scopus 로고    scopus 로고
    • Simultaneous mapping of epistatic QTL in chickens reveals clusters of QTL pairs with similar genetic effects on growth
    • 10.1017/S0016672304006779, 15462413
    • Carlborg O, Burt D, Hocking P, Haley CS. Simultaneous mapping of epistatic QTL in chickens reveals clusters of QTL pairs with similar genetic effects on growth. Genetical Research 2004, 83:197-209. 10.1017/S0016672304006779, 15462413.
    • (2004) Genetical Research , vol.83 , pp. 197-209
    • Carlborg, O.1    Burt, D.2    Hocking, P.3    Haley, C.S.4
  • 8
    • 0031917465 scopus 로고    scopus 로고
    • Epistatic interactions between smell-impaired loci in Drosophila melanogaster
    • 1460070, 9560402
    • Fedorowicz GM, Fry DJ, Anholt RR, Mackay TF. Epistatic interactions between smell-impaired loci in Drosophila melanogaster. Genetics 1998, 148:1885-1891. 1460070, 9560402.
    • (1998) Genetics , vol.148 , pp. 1885-1891
    • Fedorowicz, G.M.1    Fry, D.J.2    Anholt, R.R.3    Mackay, T.F.4
  • 9
    • 0242286604 scopus 로고    scopus 로고
    • Mapping determinants of variation in energy metabolism, respiration and flight in Drosophila
    • 1462806, 14573475
    • Montooth KL, Marden JH, Clark AG. Mapping determinants of variation in energy metabolism, respiration and flight in Drosophila. Genetics 2003, 165(2):623-635. 1462806, 14573475.
    • (2003) Genetics , vol.165 , Issue.2 , pp. 623-635
    • Montooth, K.L.1    Marden, J.H.2    Clark, A.G.3
  • 10
    • 1542350622 scopus 로고    scopus 로고
    • Domestic-animal genomics: deciphering the genetics of complex traits
    • Andersson L, Georges M. Domestic-animal genomics: deciphering the genetics of complex traits. Nature Review Genetics 2004, 5:202-212.
    • (2004) Nature Review Genetics , vol.5 , pp. 202-212
    • Andersson, L.1    Georges, M.2
  • 11
    • 0003061746 scopus 로고    scopus 로고
    • Biology and genetics of reproduction
    • Cambridge, UK: CAB International, University Press, Rothschild MF, Ruvinsky A
    • Rothschild MF, Bidanel JP. Biology and genetics of reproduction. The Genetics of the Pig 1998, 313-343. Cambridge, UK: CAB International, University Press, Rothschild MF, Ruvinsky A.
    • (1998) The Genetics of the Pig , pp. 313-343
    • Rothschild, M.F.1    Bidanel, J.P.2
  • 14
    • 0038513474 scopus 로고    scopus 로고
    • Mapping quantitative trait loci affecting female reproductive traits on porcine chromosome 8
    • 10.1095/biolreprod.102.012955, 12606397
    • King AH, Jiang ZH, Gibson JP, Haley CS, Archibald AL. Mapping quantitative trait loci affecting female reproductive traits on porcine chromosome 8. Biology of Reproduction 2003, 68(6):2172-2179. 10.1095/biolreprod.102.012955, 12606397.
    • (2003) Biology of Reproduction , vol.68 , Issue.6 , pp. 2172-2179
    • King, A.H.1    Jiang, Z.H.2    Gibson, J.P.3    Haley, C.S.4    Archibald, A.L.5
  • 16
    • 70449365600 scopus 로고    scopus 로고
    • Quantitative trait loci for litter size and prenatal loss in a White Duroc × Chinese Erhualian resource population
    • Li K, Ren J, Xing Y, Zhang Z, Ma J, Guo Y, Huang L. Quantitative trait loci for litter size and prenatal loss in a White Duroc × Chinese Erhualian resource population. Animal Genetics 2009, 40:963-966.
    • (2009) Animal Genetics , vol.40 , pp. 963-966
    • Li, K.1    Ren, J.2    Xing, Y.3    Zhang, Z.4    Ma, J.5    Guo, Y.6    Huang, L.7
  • 17
    • 33746520681 scopus 로고    scopus 로고
    • Genetic approaches to the improvement of fertility traits in the pig
    • Spötter A, Distl O. Genetic approaches to the improvement of fertility traits in the pig. Veterinary Journal 2006, 172(2):234-247.
    • (2006) Veterinary Journal , vol.172 , Issue.2 , pp. 234-247
    • Spötter, A.1    Distl, O.2
  • 18
    • 3442894519 scopus 로고    scopus 로고
    • Epistasis: too often neglected in complex trait studies?
    • Carlborg O, Haley CS. Epistasis: too often neglected in complex trait studies?. Nature Reviews 2004, 5:619-625.
    • (2004) Nature Reviews , vol.5 , pp. 619-625
    • Carlborg, O.1    Haley, C.S.2
  • 19
    • 0000108406 scopus 로고
    • Estimation of crossbreeding parameters between Large White and Meishan porcine breeds. I. Reproductive performance
    • Bidanel JP, Caritez JC, Legault C. Estimation of crossbreeding parameters between Large White and Meishan porcine breeds. I. Reproductive performance. Genetics, Selection, Evolution 1989, 21:507-526.
    • (1989) Genetics, Selection, Evolution , vol.21 , pp. 507-526
    • Bidanel, J.P.1    Caritez, J.C.2    Legault, C.3
  • 21
    • 0141525024 scopus 로고    scopus 로고
    • Mitochondrial DNA sequence variation and phylogenetic relationships among Iberian pigs and other domestic and wild pig populations
    • 10.1046/j.1365-2052.2003.01010.x, 14510666
    • Alves E, Óvilo C, Rodríguez MC, Silió L. Mitochondrial DNA sequence variation and phylogenetic relationships among Iberian pigs and other domestic and wild pig populations. Animal Genetics 2003, 34(5):319-324. 10.1046/j.1365-2052.2003.01010.x, 14510666.
    • (2003) Animal Genetics , vol.34 , Issue.5 , pp. 319-324
    • Alves, E.1    Óvilo, C.2    Rodríguez, M.C.3    Silió, L.4
  • 22
    • 3543102119 scopus 로고    scopus 로고
    • Heterosis and epistasis for teat number and fluctuating asymmetry in crosses between Jiaxing and Iberian pigs
    • 10.1038/sj.hdy.6800498, 15241457
    • Fernández A, Toro MA, Rodriguez C, Silió L. Heterosis and epistasis for teat number and fluctuating asymmetry in crosses between Jiaxing and Iberian pigs. Heredity 2004, 93(2):222-227. 10.1038/sj.hdy.6800498, 15241457.
    • (2004) Heredity , vol.93 , Issue.2 , pp. 222-227
    • Fernández, A.1    Toro, M.A.2    Rodriguez, C.3    Silió, L.4
  • 24
    • 43649100754 scopus 로고    scopus 로고
    • Detection of quantitative trait loci for teat number and female reproductive traits in Meishan × Large White F2 pigs
    • Bidanel JP, Rosendo A, Iannuccelli N, Gilbert H, Caritez JC, Billon Y, Prunier A, Milan D. Detection of quantitative trait loci for teat number and female reproductive traits in Meishan × Large White F2 pigs. Animal 2008, 2:813-820.
    • (2008) Animal , vol.2 , pp. 813-820
    • Bidanel, J.P.1    Rosendo, A.2    Iannuccelli, N.3    Gilbert, H.4    Caritez, J.C.5    Billon, Y.6    Prunier, A.7    Milan, D.8
  • 25
    • 9744271816 scopus 로고    scopus 로고
    • A genome scan for quantitative trait loci and imprinted regions affecting reproduction in pigs
    • Holl JW, Cassady JP, Pomp D, Johnson RK. A genome scan for quantitative trait loci and imprinted regions affecting reproduction in pigs. Journal of Animal. Science 2004, 82:3421-3429.
    • (2004) Journal of Animal. Science , vol.82 , pp. 3421-3429
    • Holl, J.W.1    Cassady, J.P.2    Pomp, D.3    Johnson, R.K.4
  • 26
    • 84974286161 scopus 로고
    • Comparative reproductive-performance in Meishan and Large White pigs and their crosses
    • Haley CS, Lee GJ, Ritchie M. Comparative reproductive-performance in Meishan and Large White pigs and their crosses. Animal Science 1995, 60(2):259-267.
    • (1995) Animal Science , vol.60 , Issue.2 , pp. 259-267
    • Haley, C.S.1    Lee, G.J.2    Ritchie, M.3
  • 27
    • 33748786838 scopus 로고    scopus 로고
    • Genetic variation of farrowing kinetics traits and relationships with litter size and perinatal mortality in French Large White sows
    • 10.2527/jas.2005-775, 16612006
    • Canario L, Roy N, Gruand J, Bidanel JP. Genetic variation of farrowing kinetics traits and relationships with litter size and perinatal mortality in French Large White sows. Journal of Animal Science 2006, 84:1053-1058. 10.2527/jas.2005-775, 16612006.
    • (2006) Journal of Animal Science , vol.84 , pp. 1053-1058
    • Canario, L.1    Roy, N.2    Gruand, J.3    Bidanel, J.P.4
  • 28
    • 0030779657 scopus 로고    scopus 로고
    • Gene effects on a quantitative trait: two-locus epistatic effects measured at microsatellite markers and at estimated QTL
    • Routman E, Cheverud JM. Gene effects on a quantitative trait: two-locus epistatic effects measured at microsatellite markers and at estimated QTL. Evolution 1997, 51(5):1654-1662.
    • (1997) Evolution , vol.51 , Issue.5 , pp. 1654-1662
    • Routman, E.1    Cheverud, J.M.2
  • 29
    • 0037418206 scopus 로고    scopus 로고
    • Single-locus heterotic effects and dominance by dominance interactions can adequately explain the genetic basis of heterosis in an elite rice hybrid
    • 10.1073/pnas.0437907100, 151382, 12604771
    • Hua JP, Xing YZ, Wu WR, Xu CG, Sun XL, Yu SB, Zhang QF. Single-locus heterotic effects and dominance by dominance interactions can adequately explain the genetic basis of heterosis in an elite rice hybrid. PNAS 2003, 100(5):2574-2579. 10.1073/pnas.0437907100, 151382, 12604771.
    • (2003) PNAS , vol.100 , Issue.5 , pp. 2574-2579
    • Hua, J.P.1    Xing, Y.Z.2    Wu, W.R.3    Xu, C.G.4    Sun, X.L.5    Yu, S.B.6    Zhang, Q.F.7
  • 30
    • 0004287113 scopus 로고
    • Genetics of the evolutionary process
    • New York: Columbia University Press, 1208968, 17246845
    • Dobzhansky T. Genetics of the evolutionary process. 1937, New York: Columbia University Press, 1208968, 17246845.
    • (1937)
    • Dobzhansky, T.1
  • 31
    • 0002084648 scopus 로고
    • Bearing of the Drosophila work on systematics
    • Oxford: Clarendon, Huxley J
    • Muller HJ. Bearing of the Drosophila work on systematics. The new systematics 1940, 185-268. Oxford: Clarendon, Huxley J.
    • (1940) The new systematics , pp. 185-268
    • Muller, H.J.1
  • 32
    • 0002101476 scopus 로고
    • Isolating mechanisms, evolution and temperature
    • Muller HJ. Isolating mechanisms, evolution and temperature. Biological Symposium 1942, 6:71-125.
    • (1942) Biological Symposium , vol.6 , pp. 71-125
    • Muller, H.J.1
  • 33
    • 33744497560 scopus 로고    scopus 로고
    • Polymorphisms of the porcine dopamine beta-hydroxylase gene and their relation to reproduction and piglet survivability in an Iberian × Meishan F2 intercross
    • 10.1111/j.1365-2052.2006.01457.x, 16734693
    • Tomàs A, Casellas J, Ramirez O, Pérez-Enciso M, Rodriguez C, Noguera JL, Sánchez A. Polymorphisms of the porcine dopamine beta-hydroxylase gene and their relation to reproduction and piglet survivability in an Iberian × Meishan F2 intercross. Animal Genetics 2006, 37(3):279-282. 10.1111/j.1365-2052.2006.01457.x, 16734693.
    • (2006) Animal Genetics , vol.37 , Issue.3 , pp. 279-282
    • Tomàs, A.1    Casellas, J.2    Ramirez, O.3    Pérez-Enciso, M.4    Rodriguez, C.5    Noguera, J.L.6    Sánchez, A.7
  • 34
    • 52149092140 scopus 로고    scopus 로고
    • An Association Analysis Between a Silent C558T Polymorphism at the Pig Vascular Cell Adhesion Molecule 1 Locus and Sow Reproduction and Piglet Survivability Traits
    • Ramirez O, Tomàs A, Casellas J, Blanch M, Noguera JL, Amills M. An Association Analysis Between a Silent C558T Polymorphism at the Pig Vascular Cell Adhesion Molecule 1 Locus and Sow Reproduction and Piglet Survivability Traits. Reproduction Domestic Animals 2008, 43(5):542-546.
    • (2008) Reproduction Domestic Animals , vol.43 , Issue.5 , pp. 542-546
    • Ramirez, O.1    Tomàs, A.2    Casellas, J.3    Blanch, M.4    Noguera, J.L.5    Amills, M.6
  • 35
    • 33744492600 scopus 로고    scopus 로고
    • An association study between polymorphisms of the porcine bone morphogenetic protein receptor type1beta(BMPR1β) and reproductive performance of Iberian × Meishan F2 sows
    • 10.1111/j.1365-2052.2006.01456.x, 16734701
    • Tomàs A, Frigo E, Casellas J, Ramirez O, Ovilo C, Noguera JL, Sánchez A. An association study between polymorphisms of the porcine bone morphogenetic protein receptor type1beta(BMPR1β) and reproductive performance of Iberian × Meishan F2 sows. Animal Genetics 2006, 37(3):297-298. 10.1111/j.1365-2052.2006.01456.x, 16734701.
    • (2006) Animal Genetics , vol.37 , Issue.3 , pp. 297-298
    • Tomàs, A.1    Frigo, E.2    Casellas, J.3    Ramirez, O.4    Ovilo, C.5    Noguera, J.L.6    Sánchez, A.7
  • 36
    • 33748437501 scopus 로고    scopus 로고
    • High amino acid variation in the intracellular domain of the pig prolactin receptor (PRLR) and its relation to ovulation rate and piglet survival traits
    • 10.2527/jas.2005-664, 16864857
    • Tomàs A, Casellas J, Ramirez O, Muñoz G, Noguera JL, Sánchez A. High amino acid variation in the intracellular domain of the pig prolactin receptor (PRLR) and its relation to ovulation rate and piglet survival traits. Journal of Animal Science 2006, 84(8):1991-1998. 10.2527/jas.2005-664, 16864857.
    • (2006) Journal of Animal Science , vol.84 , Issue.8 , pp. 1991-1998
    • Tomàs, A.1    Casellas, J.2    Ramirez, O.3    Muñoz, G.4    Noguera, J.L.5    Sánchez, A.6
  • 39
    • 0003490904 scopus 로고    scopus 로고
    • Documentation of CRI-MAP
    • Green P, Falls K, Crooks S. Documentation of CRI-MAP. , http://linkage.rockefeller.edu/soft/crimap/
    • Green, P.1    Falls, K.2    Crooks, S.3
  • 40
    • 0028219062 scopus 로고
    • Mapping quantitative trait loci in crosses between outbreed lines using least squares
    • 1205874, 8005424
    • Haley CS, Knott SA, Elsen JM. Mapping quantitative trait loci in crosses between outbreed lines using least squares. Genetics 1994, 136:1195-1207. 1205874, 8005424.
    • (1994) Genetics , vol.136 , pp. 1195-1207
    • Haley, C.S.1    Knott, S.A.2    Elsen, J.M.3
  • 41
    • 0000046644 scopus 로고
    • An extension of the concept of partitioning hereditary variance for analysis of covariances among relatives when epistasis is present
    • 1209694, 17247525
    • Cockerham CC. An extension of the concept of partitioning hereditary variance for analysis of covariances among relatives when epistasis is present. Genetics 1954, 39:859-882. 1209694, 17247525.
    • (1954) Genetics , vol.39 , pp. 859-882
    • Cockerham, C.C.1
  • 42
    • 0036199370 scopus 로고    scopus 로고
    • Modeling epistasis of quantitative trait loci using Cockerham's model
    • 1462022, 11901137
    • Kao C-H, Zeng Z-B. Modeling epistasis of quantitative trait loci using Cockerham's model. Genetics 2002, 160:1243-1261. 1462022, 11901137.
    • (2002) Genetics , vol.160 , pp. 1243-1261
    • Kao, C.-.H.1    Zeng, Z.-.B.2
  • 43
    • 0024508964 scopus 로고
    • Mapping mendelian factors underlying quantitative traits using RFLP linkage maps
    • 1203601, 2563713
    • Lander ES, Botstein D. Mapping mendelian factors underlying quantitative traits using RFLP linkage maps. Genetics 1989, 121:185-199. 1203601, 2563713.
    • (1989) Genetics , vol.121 , pp. 185-199
    • Lander, E.S.1    Botstein, D.2
  • 44
    • 0001677717 scopus 로고
    • Controlling the False discovery rate - a practical and powerful approach to multiple testing
    • Benjamini Y, Hochberg Y. Controlling the False discovery rate - a practical and powerful approach to multiple testing. Journal of the Royal Statistical Society B 1995, 57:289-300.
    • (1995) Journal of the Royal Statistical Society B , vol.57 , pp. 289-300
    • Benjamini, Y.1    Hochberg, Y.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.