Nanofabricated racks of aligned and anchored DNA substrates for single-molecule imaging

Langmuir

Volumn 26, Issue 2, 2010, Pages 1372-1379

  Gorman, Jason ^a   Fazio, Teresa ^b   Wang, Feng ^a   Wind, Shalom ^b   Greene, Eric C ^a  

^a Och Spine at New York Presbyterian Hospitals   (United States)

^b NONE   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ANCHOR POINT; BI-LAYER; BIOLOGICAL MACROMOLECULE; DNA MOLECULES; DNA SUBSTRATES; EXPERIMENTAL DESIGN; EXPERIMENTAL PLATFORM; FUNCTIONAL ELEMENTS; HYDRODYNAMIC FORCES; LIPID DIFFUSION; NEW STRATEGY; PROOF OF PRINCIPLES; PROTEIN-DNA INTERACTIONS; QUANTUM DOT; SINGLE-MOLECULE IMAGING; SINGLE-MOLECULE STUDIES; TAGGED PROTEINS; TOTAL INTERNAL REFLECTION FLUORESCENCE MICROSCOPY;

AVIATION; FLUORESCENCE MICROSCOPY; GENES; LIPID BILAYERS; MOLECULES; PROTEINS; REFRACTIVE INDEX; SEMICONDUCTOR QUANTUM DOTS; SUBSTRATES;

DNA;

BIOTIN; DIGOXIGENIN; DNA; FLUORESCEIN ISOTHIOCYANATE; QUANTUM DOT;

ARTICLE; CHEMISTRY; LIPID BILAYER; METHODOLOGY; MICROFLUIDICS; MICROSCOPY; MOLECULAR IMAGING; NANOTECHNOLOGY;

BIOTIN; DIGOXIGENIN; DNA; FLUORESCEIN-5-ISOTHIOCYANATE; LIPID BILAYERS; MICROFLUIDICS; MICROSCOPY; MOLECULAR IMAGING; NANOTECHNOLOGY; QUANTUM DOTS;

EID: 74249105084     PISSN: 07437463     EISSN: None     Source Type: Journal    
DOI: 10.1021/la902443e     Document Type: Article

References (39)

1. Bustamante, C.; Bryant, Z.; Smith, S. B. Nature 2003, 421, 423-427
2. Cairns, B. R. Nat. Struct. Mol. Biol. 2007, 14, 989-996
3. Zlatanova, J.; van Holde, K. Mol. Cell 2006, 24, 317-329
4. van Oijen, A. M. Biopolymers 2007, 85, 144-153
5. Riehn, R.; Austin, R. H.; Sturm, J. C. Nano Lett. 2006, 6, 1973-1976
6. Riehn, R.; Lu, M.; Wang, Y. M.; Lim, S. F.; Cox, E. C.; Austin, R. H. Proc. Natl. Acad. Sci. U.S.A. 2005, 102, 10012-10016
7. Tegenfeldt, J. O.; Prinz, C.; Cao, H.; Huang, R. L.; Austin, R. H.; Chou, S. Y.; Cox, E. C.; Sturm, J. C. Appl. Bioanal. Chem. 2004, 378, 1678-1692
8. Fazio, T.; Visnapuu, M. L.; Wind, S.; Greene, E. C. Langmuir 2008, 24, 10524-10531
9. Visnapuu, M. L.; Fazio, T.; Wind, S.; Greene, E. C. Langmuir 2008, 24, 11293-11299
10. Granéli, A.; Yeykal, C.; Prasad, T. K.; Greene, E. C. Langmuir 2006, 22, 292-299
11. Chan. Y. H.; Boxer, S. G. Curr. Opin. Chem. Biol. 2007, 11, 581-587
12. Perez, T. D.; Nelson, W. J.; Boxer, S. G.; Kam, L. Langmuir 2005, 21, 11963-11968
13. Floyd, D. L.; Ragains, J. R.; Skehel. J. J.; Harrison, S. C.; van Oijen, A. M. Proc. Natl. Acad. Sci. U.S.A. 2008, 105, 15382-15387
14. Sackmann, E. Science 1996, 271, 43-48
15. Cremer, P. S.; Boxer, S. G. J. Phys. Chem. B 1999, 103, 2554-2559
16. Groves, J. T.; Boxer, S. G. Acc. Chem. Res. 2002, 35, 149-157
17. Groves, J. T.; Ulman, N.; Boxer, S. G. Scince 1997, 275, 651-653
18. Tanaka, M.; Hermann, J.; Haase, I.; Fischer, M.; Boxer, S. G. Langmuir 2007, 23, 5638-5644
19. Groves, J. T.; Boxer, S. G.; McConnell, H. M. Proc. Natl. Acad. Sci. U.S.A. 1997, 94, 13390-13395
20. Jackson, B. L.; Nye, J. A.; Groves, J. T. Langmuir 2008, 24, 6189-6193
21. Gorman, J.; Chowdhury, A.; Surtees, J. A.; Shimada, J.; Reichman, D. R.; Alani, E.; Greene, E. C. Mol. Cell 2007, 28, 359-370
22. Granéli, A.; Yeykal, C.; Robertson, R. B.; Greene, E. C. Proc. Natl. Acad. Sci. U.S.A. 2006, 103, 1221-1226
23. Prasad, T. K.; Robertson, R. B.; Visnapuu, M. L.; Chi, P.; Sung, P.; Greene, E. C. J. Mol. Biol. 2007, 369, 940-953
24. Prasad, T. K.; Yeykal, C.; Greene, E. C. J. Mol. Biol. 2006, 363, 713-728
25. Visnapuu, M. L.; Greene, E. C. Nat. Struct. Mal. Biol. 2009, in press.
26. Gorman, J.; Greene, E. C. Nat. Struct. Mol. Biol. 2008, 15, 768-774
27. Tafvizi, A.; Huang, F.; Leith, J. S.; Fersht, A. R.; Mirny, L. A.; van Oijen, A. M. Biophys. J. 2008, 95, L01-3.
28. Chou, S. Y.; Krauss, P. R.; Renstrom, P. J. Science 1996, 272, 85-87
29. Gao, H.; Tan, H.; Zhang, W.; Morton, K.; Chou, S. Y. Nano Lett. 2006, 6, 2438-2441
30. Knoll, W.; Rothenhäusler, B. Nature 1988, 332, 615-617
31. Kim, G.; Campbell, C. T. Biomaterials 2007, 28, 2380-2392
32. Kunkel, T. A.; Erie, D. A. Annu. Rev. Biochem. 2005, 74, 681-710.
33. Gorman, J.; Plys, A.; Alani, E.; Greene, E. C., manuscript in preparation.
34. Lebofsky, R.; Bensimon, A. Briefings Funct. Genomics Proteomics 2003, 1, 385-396
35. Kabata, H.; Kurosawa, O.; Arai, I.; Washizu, M.; Margarson, S. A.; Glass, R. E.; Shimamoto, N. Science 1993, 262, 1561-1563
36. Guan, J.; Lee, L. J. Proc. Natl. Acad, Sci. U.S.A. 2005, 102, 18321-18325
37. Kim, S.; Blainey, P. C.; Schroeder, C. M.; Xie, S. X. Nat. Methods 2007, 4, 397-399
38. Assi, F.; Jenks, R.; Yang, J.; Love, C.; Prentiss, M. J. Appl. Phys. 2002, 92, 5584-5586
39. Lin, J.; Qi, R.; Aston, C.; Jing, J.; Anantharaman, T. S.; Mishra, B.; White, O.; Daly, M. J.; Minton, K. W.; Venter, J. C.; Schwartz, D. C. Science 1999, 285, 1558-1562