The conformation of end-groups is one determinant of carotenoid topology suitable for high fidelity molecular recognition: A study of β- and ε-end-groups

Archives of Biochemistry and Biophysics

Volumn 493, Issue 2, 2010, Pages 169-174

  Landrum, John T ^a   Chatfield, David C ^a   Mebel, Alex M ^a   Alvarez Calderon, Francesca ^b   Fernandez, Melissa V ^a  

^a FLORIDA INTERNATIONAL UNIVERSITY   (United States)

^b UNIVERSITY OF COLORADO SCHOOL OF MEDICINE   (United States)

Author keywords

Ionone ring; Ionone ring; Carotenoids; Conformation; Lutein; Rotational barrier; Selective binding; Zeaxanthin

Indexed keywords

CAROTENOID; POLYENE;

ARTICLE; BINDING SITE; CALCULATION; CHEMICAL ANALYSIS; CHEMICAL BOND; CHEMICAL STRUCTURE; CONFORMATION; CONTROLLED STUDY; MATHEMATICAL COMPUTING; MOLECULAR RECOGNITION; PRIORITY JOURNAL; PROTEIN BINDING; STEREOSPECIFICITY; STRUCTURE ANALYSIS;

CAROTENOIDS; MODELS, MOLECULAR; MOLECULAR STRUCTURE; THERMODYNAMICS;

EID: 72949097005     PISSN: 00039861     EISSN: 10960384     Source Type: Journal    
DOI: 10.1016/j.abb.2009.10.007     Document Type: Article

References (28)

1. Phillip D., et al. J. Biol. Chem. 277 28 (2002) 25160-25169
2. Wang Y., Mao L., and Hu X. Biophys. J. 86 5 (2004) 3097-3111
3. Matsumoto A., et al. Biochem. Pharmacol. 74 2 (2007) 256-264
4. Ruprecht J.J., et al. Embo J. 23 18 (2004) 3609-3620
5. Salgado G.F., et al. Biochemistry 43 40 (2004) 12819-12828
6. Lin S.W., and Mathies R.A. Biophys. J. 56 4 (1989) 653-660
7. Kloer D.P., et al. Science 308 5719 (2005) 267-269
8. Dreon M.S., et al. FEBS J. 275 18 (2008) 4522-4530
9. Bhosale P., et al. Biochemistry 48 22 (2009) 4798-4807
10. Hazai E., et al. Bioorg. Med. Chem. 14 20 (2006) 6859-6867
11. Ulrich A.S., Heyn M.P., and Watts A. Biochemistry 31 42 (1992) 10390-10399
12. Bone R.A., et al. Invest. Ophthalmol. Vis. Sci 29 (1988) 843-849
13. Roszak A.W., et al. Structure 12 5 (2004) 765-773
14. Creemers A.F., et al. Proc. Natl. Acad. Sci. USA 99 14 (2002) 9101-9106
15. Young A.J., Phillip D., and Hashimoto H. J. Mol. Struct. 642 (2002) 137-145
16. Hashimoto H., et al. J. Mol. Struct. 604 (2002) 125-146
17. Noak K. Circular dichroism of carotenoids and its use in investigations of their structures configurations and conformations. In: Britton G., and Goodwin T.W. (Eds). Carotenoid Chemistry & Biochemistry (1981), Pergamon Press 135-153
18. Bart J.C.J., and MacGillavry C.H. Acta Cryst. B24 (1968) 1587-1606
19. Dreuw A. J. Phys. Chem. A 110 13 (2006) 4592-4599
20. Miller K. Bull. Soc. Chim. Belg. 97 (1988) 655
21. M.J. Frisc, et al., Gaussian 98, Revision A.6, Gaussian Inc., Pittsburgh, PA, 1998.
22. Pullman B., Langlet J., and Berthod H. J. Theoret. Biol. 23 (1969) 492-495
23. Honig B., Warshel A., and Karplus M. Acc. Chem. Res. 8 (1975) 92-100
24. Cramer C.J. Essentials of Computational Chemistry (2002), John Wiley & Sons., Chichester, England
25. Choi C.H. Chem. Phys. Lett. 276 (1997) 266268
26. Sancho-Garcia J.C. J. Chem. Phys. 124 (2006) 124112
27. Engeln R., Consalvo D., and Reuss J. Chem. Phys. (1992) 427-433
28. Sancho-Garcia J.C. J. Phys. Chem. A 109 15 (2005) 3470-3475