Planomicrobium flavidum sp. nov., isolated from a marine solar saltern, and transfer of Planococcus stackebrandtii Mayilraj et al. 2005 to the genus Planomicrobium as Planomicrobium stackebrandtii comb. nov

International Journal of Systematic and Evolutionary Microbiology

Volumn 59, Issue 12, 2009, Pages 2929-2933

  Jung, Yong Taek ^a,b   Kang, So Jung ^a   Oh, Tae Kwang ^a   Yoon, Jung Hoon ^a   Kim, Bong Hee ^b  

^a Korea Research Institute of Bioscience and Biotechnology (KRIBB)   (South Korea)

^b Chungnam National University   (South Korea)

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIAL DNA; CYTOSINE; FATTY ACID; GUANINE; MENAQUINONE; RNA 16S;

ARTICLE; BACILLUS (ROD SHAPED BACTERIUM); BACTERIAL GROWTH; BACTERIAL STRAIN; BACTERIUM ISOLATE; DNA CONTENT; GENE SEQUENCE; GENETIC SIMILARITY; GRAM POSITIVE BACTERIUM; MARINE SPECIES; NEW SPECIES; NONHUMAN; NUCLEOTIDE SEQUENCE; PH; PHENOTYPE; PHYLOGENY; PLANOCOCCUS STACKEBRANDTII; PLANOMICROBIUM FLAVIDUM; PLANOMICROBIUM STACKEBRANDTII; PRIORITY JOURNAL; SPECIES DIFFERENTIATION; TAXONOMY; TEMPERATURE;

BACILLALES; BASE COMPOSITION; DNA, BACTERIAL; DNA, RIBOSOMAL; GEOLOGIC SEDIMENTS; MOLECULAR SEQUENCE DATA; PHYLOGENY; RNA, RIBOSOMAL, 16S; SEAWATER;

BACTERIA (MICROORGANISMS); COCCOIDEA; PLANOCOCCUS STACKEBRANDTII; PLANOMICROBIUM; POSIBACTERIA;

EID: 72149110350     PISSN: 14665026     EISSN: None     Source Type: Journal    
DOI: 10.1099/ijs.0.009191-0     Document Type: Article

References (21)

1. Bruns, A., Rohde, M. & Berthe-Corti, L. (2001). Muricauda ruestringensis gen. nov., sp. nov., a facultatively anaerobic, appendaged bacterium from German North Sea intertidal sediment. Int J Syst Evol Microbiol 51, 1997-2006.
2. Cowan, S. T. & Steel, K. J. (1965). Manual for the identification of medical bacteria. London: Cambridge University Press.
3. Dai, X., Wang, Y.-N., Wang, B.-J., Liu, S.-J. & Zhou, Y.-G. (2005). Planomicrobium chinense sp. nov., isolated from coastal sediment, and transfer of Planococcus psychrophilus and Planococcus alkanoclasticus to Planomicrobium as Planomicrobium psychrophilum comb. nov. and Planomicrobium alkanoclasticum comb. nov. Int J Syst Evol Microbiol 55, 699-702.
4. Engelhardt, M. A., Daly, K., Swannell, R. P. J. & Head, I. M. (2001). Isolation and characterization of a novel hydrocarbon-degrading, Gram-positive bacterium, isolated from intertidal sediment, and description of Planococcus alkanoclasticus sp. nov. J Appl Microbiol 90, 237-247.
5. Ezaki, T., Hashimoto, Y. & Yabuuchi, E. (1989). Fluorometric deoxyribonucleic acid-deoxyribonucleic acid hybridization in microdilution wells as an alternative to membrane filter hybridization in which radioisotopes are used to determine genetic relatedness among bacterial strains. Int J Syst Bacteriol 39, 224-229.
6. Junge, K., Gosink, J. J., Hoppe, H.-G. & Staley, J. T. (1998). Arthrobacter, Brachybacterium and Planococcus isolates identified from Antarctic sea ice brine. Description of Planococcus mcmeekinii sp. nov. Syst Appl Microbiol 21, 306-314.
7. Komagata, K. & Suzuki, K. (1987). Lipids and cell-wall analysis in bacterial systematics. Methods Microbiol 19, 161-203.
8. Lányi, B. (1987). Classical and rapid identification methods for medically important bacteria. Methods Microbiol 19, 1-67.
9. Leifson, E. (1963). Determination of carbohydrate metabolism of marine bacteria. J Bacteriol 85, 1183-1184.
10. Mayilraj, S., Prasad, G. S., Suresh, K., Saini, H. S., Shivaji, S. & Chakrabarti, T. (2005). Planococcus stackebrandtii sp. nov., isolated from a cold desert of the Himalayas, India. Int J Syst Evol Microbiol 55, 91-94.
11. Nakagawa, Y., Sakane, T. & Yokota, A. (1996). Emendation of the genus Planococcus and transfer of Flavobacterium okeanokoites Zobell and Upham 1944 to the genus Planococcus as Planococcus okeanokoites comb. nov. Int J Syst Bacteriol 46, 866-870.
12. Reddy, G. S. N., Prakash, J. S. S., Vairamani, M., Prabhakar, S., Matsumoto, G. I. & Shivaji, S. (2002). Planococcus antarcticus and Planococcus psychrophilus spp. nov. isolated from cyanobacterial mat samples collected from ponds in Antarctica. Extremophiles 6, 253-261.
13. Sasser, M. (1990). Identification of bacteria by gas chromatography of cellular fatty acids, Technical Note no. 1. Newark, DE: MIDI.
14. Stackebrandt, E. & Goebel, B. M. (1994). Taxonomic note: a place for DNA-DNA reassociation and 16S rRNA sequence analysis in the present species definition in bacteriology. Int J Syst Bacteriol 44, 846-849.
15. Tamaoka, J. & Komagata, K. (1984). Determination of DNA base composition by reversed-phase high-performance liquid chromatography. FEMS Microbiol Lett 25, 125-128.
16. Wayne, L. G., Brenner, D. J., Colwell, R. R., Grimont, P. A. D., Kandler, O., Krichevsky, M. I., Moore, L. H., Moore, W. E. C., Murray, R. G. E. & other authors (1987). International Committee on Systematic Bacteriology. Report of the ad hoc committee on reconciliation of approaches to bacterial systematics. Int J Syst Bacteriol 37, 463-464.
17. Yoon, J.-H., Kim, H., Kim, S.-B., Kim, H.-J., Kim, W. Y., Lee, S. T., Goodfellow, M. & Park, Y.-H. (1996). Identification of Saccharomonospora strains by the use of genomic DNA fragments and rRNA gene probes. Int J Syst Bacteriol 46, 502-505.
18. Yoon, J.-H., Lee, S. T. & Park, Y.-H. (1998). Inter- and intraspecific phy-logenetic analysis of the genus Nocardioides and related taxa based on 16S rRNA gene sequences. Int J Syst Bacteriol 48, 187-194.
19. Yoon, J.-H., Kang, S.-S., Lee, K.-C., Kho, Y. H., Kang, K. H. & Park, Y.-H. (2001). Planomicrobium koreense gen. nov., sp. nov., a bacterium isolated from the Korean traditional fermented seafood jeotgal, and transfer of Planococcus okeanokoites (Nakagawa et al. 1996) and Planococcus mcmeekinii (Junge et al. 1998) to the genus Planomicrobium. Int J Syst Evol Microbiol 51, 1511-1520.
20. Yoon, J.-H., Kang, K. H. & Park, Y.-H. (2003). Psychrobacter jeotgali sp. nov., isolated from jeotgal, a traditional Korean fermented seafood. Int J Syst Evol Microbiol 53, 449-454.
21. Zhang, D.-C., Liu, H.-C., Xin, Y.-H., Yu, Y., Zhou, P.-J. & Zhou, Y. G. (2009). Planomicrobium glaciei sp. nov., a psychrotolerant bacterium isolated from a glacier. Int J Syst Evol Microbiol 59, 1387-1390