메뉴 건너뛰기




Volumn 48, Issue 1, 1998, Pages 187-194

Inter- and intraspecific phylogenetic analysis of the genus Nocardioides and related taxa based on 16S rDNA sequences

Author keywords

16S rDNA sequence analysis; Nocardioides; Phylogeny

Indexed keywords

RIBOSOME DNA;

EID: 0344542711     PISSN: 00207713     EISSN: None     Source Type: Journal    
DOI: 10.1099/00207713-48-1-187     Document Type: Article
Times cited : (526)

References (30)
  • 1
    • 0024614668 scopus 로고
    • Molecular taxonomic studies on some LL-diaminopimelic acid-containing coryneforms from herbage: Description of Nocardioides fastidiosa sp. nov.
    • Collins, M. D. & Stackebrandt, E. (1989). Molecular taxonomic studies on some LL-diaminopimelic acid-containing coryneforms from herbage: description of Nocardioides fastidiosa sp. nov. FEMS Microbiol Lett 57, 289-294.
    • (1989) FEMS Microbiol Lett , vol.57 , pp. 289-294
    • Collins, M.D.1    Stackebrandt, E.2
  • 2
    • 0024578977 scopus 로고
    • Transfer of Pimelobacter tumescens to Terrabacter gen. nov. as Terrabacter tumescens comb. nov. and of Pimelobacter jensenii to Nocardioides as Nocardioides jensenii comb. nov.
    • Collins, M. D., Dorsch, M. & Stackebrandt, E. (1989). Transfer of Pimelobacter tumescens to Terrabacter gen. nov. as Terrabacter tumescens comb. nov. and of Pimelobacter jensenii to Nocardioides as Nocardioides jensenii comb. nov. Int J Syst Bacteriol 39, 1-6.
    • (1989) Int J Syst Bacteriol , vol.39 , pp. 1-6
    • Collins, M.D.1    Dorsch, M.2    Stackebrandt, E.3
  • 3
    • 0028244449 scopus 로고
    • Phylogenetic analysis of a new LL-diaminopimelic acid-containing coryneform bacterium from herbage, Nocardioides plantarum sp. nov.
    • Collins, M. D., Cockcroft, S. & Wallbanks, S. (1994). Phylogenetic analysis of a new LL-diaminopimelic acid-containing coryneform bacterium from herbage, Nocardioides plantarum sp. nov. Int J Syst Bacteriol 44, 523-526.
    • (1994) Int J Syst Bacteriol , vol.44 , pp. 523-526
    • Collins, M.D.1    Cockcroft, S.2    Wallbanks, S.3
  • 5
    • 0001545459 scopus 로고
    • AL
    • Edited by S. T. Williams, M. E. Sharpe & J. G. Holt. Baltimore: Williams & Wilkins
    • AL. In Bergey's Manual of Systematic Bacteriology, vol. 4, pp. 2362-2371. Edited by S. T. Williams, M. E. Sharpe & J. G. Holt. Baltimore: Williams & Wilkins.
    • (1989) Bergey's Manual of Systematic Bacteriology , vol.4 , pp. 2362-2371
    • Goodfellow, M.1
  • 8
    • 0028970331 scopus 로고
    • A phylogenetic analysis of the genus Saccharomonospora conducted with 16S rRNA gene sequences
    • Kim, S.-B., Yoon, J.-H., Kim, H., Lee, S. T., Park, Y.-H. & Goodfellow, M. (1995). A phylogenetic analysis of the genus Saccharomonospora conducted with 16S rRNA gene sequences. Int J Syst Bacteriol 45, 351-356.
    • (1995) Int J Syst Bacteriol , vol.45 , pp. 351-356
    • Kim, S.-B.1    Yoon, J.-H.2    Kim, H.3    Lee, S.T.4    Park, Y.-H.5    Goodfellow, M.6
  • 9
    • 0002768530 scopus 로고
    • A critical evaluation of the genera of aerobic actinomycetes
    • Edited by H. Prauser. Jena: Gustav Fischer Verlag
    • Lechevalier, M. P. & Lechevalier, H. A. (1970). A critical evaluation of the genera of aerobic actinomycetes. In The Actinomycetales, pp. 393-405. Edited by H. Prauser. Jena: Gustav Fischer Verlag.
    • (1970) The Actinomycetales , pp. 393-405
    • Lechevalier, M.P.1    Lechevalier, H.A.2
  • 10
    • 0027956550 scopus 로고
    • Biodegradation of pyridine by freely suspended and immobilized Pimelobacter sp.
    • Lee, S.-T., Rhee, S.-K. & Lee, G. M. (1994). Biodegradation of pyridine by freely suspended and immobilized Pimelobacter sp. Appl Microbiol Biotechnol 41, 652-657.
    • (1994) Appl Microbiol Biotechnol , vol.41 , pp. 652-657
    • Lee, S.-T.1    Rhee, S.-K.2    Lee, G.M.3
  • 11
    • 0344157226 scopus 로고
    • Studies of the classification of thermophilic actinomycetes : Determination of thermophilic members of Nocardiaceae
    • Lu, Y. & Yan, X. (1983). Studies of the classification of thermophilic actinomycetes : determination of thermophilic members of Nocardiaceae. Acta Microbiol Sin 23, 220-228.
    • (1983) Acta Microbiol Sin , vol.23 , pp. 220-228
    • Lu, Y.1    Yan, X.2
  • 12
    • 0025870605 scopus 로고
    • Description of the erythromycin-producing bacterium Arthrobacter sp. strain NRRL B-3381 as Aeromicrobium erythreum gen. nov., sp. nov.
    • Miller, E. S., Woese, C. R. & Brenner, S. (1991). Description of the erythromycin-producing bacterium Arthrobacter sp. strain NRRL B-3381 as Aeromicrobium erythreum gen. nov., sp. nov. Int J Syst Bacteriol 41, 363-368.
    • (1991) Int J Syst Bacteriol , vol.41 , pp. 363-368
    • Miller, E.S.1    Woese, C.R.2    Brenner, S.3
  • 13
    • 0020426055 scopus 로고
    • Lipids in the classification of Nocardioides : Reclassification of Arthrobacter simplex (Jensen) Lochhead in the genus Nocardioides (Prauser) emend. O'Donnell et al. as Nocardioides simplex comb. nov.
    • O'Donnell, A. G., Goodfellow, M. & Minnikin, D. E. (1982). Lipids in the classification of Nocardioides : reclassification of Arthrobacter simplex (Jensen) Lochhead in the genus Nocardioides (Prauser) emend. O'Donnell et al. as Nocardioides simplex comb. nov. Arch Microbiol 133, 323-329.
    • (1982) Arch Microbiol , vol.133 , pp. 323-329
    • O'Donnell, A.G.1    Goodfellow, M.2    Minnikin, D.E.3
  • 14
    • 0026281333 scopus 로고
    • Phylogenetic analysis of some LL-diaminopimelic acid-containing coryneform bacteria from human skin : Description of Propionibacterium innocuum sp. nov.
    • Pitcher, D. G. & Collins, M. D. (1991). Phylogenetic analysis of some LL-diaminopimelic acid-containing coryneform bacteria from human skin : description of Propionibacterium innocuum sp. nov. FEMS Microbiol Lett 84, 295-300.
    • (1991) FEMS Microbiol Lett , vol.84 , pp. 295-300
    • Pitcher, D.G.1    Collins, M.D.2
  • 15
    • 0017235134 scopus 로고
    • Nocardioides, a new genus of the order Actinomycetales
    • Prauser, H. (1976). Nocardioides, a new genus of the order Actinomycetales. Int J Syst Bacteriol 26, 58-65.
    • (1976) Int J Syst Bacteriol , vol.26 , pp. 58-65
    • Prauser, H.1
  • 16
    • 84985240004 scopus 로고
    • Nocardioides luteus spec. nov.
    • Prauser, H. (1984). Nocardioides luteus spec. nov. Z Allg Mikrobiol 24, 647-648.
    • (1984) Z Allg Mikrobiol , vol.24 , pp. 647-648
    • Prauser, H.1
  • 17
    • 0006559857 scopus 로고
    • AL
    • Edited by S. T. Williams, M. E. Sharpe & J. G. Holt. Baltimore : Williams & Wilkins
    • AL. In Bergey's Manual of Systematic Bacteriology, vol. 4, pp. 2371-2375. Edited by S. T. Williams, M. E. Sharpe & J. G. Holt. Baltimore : Williams & Wilkins.
    • (1989) Bergey's Manual of Systematic Bacteriology , vol.4 , pp. 2371-2375
    • Prauser, H.1
  • 18
    • 0030221792 scopus 로고    scopus 로고
    • Effects of pyridine on the fatty acid composition of Pimelobacter sp.
    • Rhee, S.-K., Lee, G. M., Kim, Y. B. & Lee, S.-T. (1996). Effects of pyridine on the fatty acid composition of Pimelobacter sp. FEMS Microbiol Lett 141, 139-143.
    • (1996) FEMS Microbiol Lett , vol.141 , pp. 139-143
    • Rhee, S.-K.1    Lee, G.M.2    Kim, Y.B.3    Lee, S.-T.4
  • 19
    • 0344588687 scopus 로고
    • Two new species of Nocardioides
    • Ruan, J. S. & Zhang, Y. M. (1979). Two new species of Nocardioides. Acta Microbiol Sin 19, 347-352.
    • (1979) Acta Microbiol Sin , vol.19 , pp. 347-352
    • Ruan, J.S.1    Zhang, Y.M.2
  • 20
    • 0023375195 scopus 로고
    • The neighbor-joining method: A new method for reconstructing phylogenetic trees
    • Saitou, N. & Nei, M. (1987). The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 4, 406-425.
    • (1987) Mol Biol Evol , vol.4 , pp. 406-425
    • Saitou, N.1    Nei, M.2
  • 21
    • 0028028182 scopus 로고
    • Taxonomic note: A place for DNA-DNA reassociation and 16S rRNA sequence analysis in the present species definition in bacteriology
    • Stackebrandt, E. & Goebel, B. M. (1994). Taxonomic note: a place for DNA-DNA reassociation and 16S rRNA sequence analysis in the present species definition in bacteriology. Int J Syst Bacteriol 44, 846-849.
    • (1994) Int J Syst Bacteriol , vol.44 , pp. 846-849
    • Stackebrandt, E.1    Goebel, B.M.2
  • 22
    • 0000665623 scopus 로고
    • Nucleic acids and classification
    • Edited by M. Goodfellow & A. G. O'Donnell. London : Academic Press
    • Stackebrandt, E. & Liesack, W. (1993). Nucleic acids and classification. In Handbook of New Bacterial Systematics, pp. 152-189. Edited by M. Goodfellow & A. G. O'Donnell. London : Academic Press.
    • (1993) Handbook of New Bacterial Systematics , pp. 152-189
    • Stackebrandt, E.1    Liesack, W.2
  • 23
    • 0020509401 scopus 로고
    • Pimelobacter gen. nov., a new genus of coryneform bacteria with LL-diaminopimelic acid in the cell wall
    • Suzuki, K. & Komagata, K. (1983). Pimelobacter gen. nov., a new genus of coryneform bacteria with LL-diaminopimelic acid in the cell wall. J Gen Appl Microbiol 29, 59-71.
    • (1983) J Gen Appl Microbiol , vol.29 , pp. 59-71
    • Suzuki, K.1    Komagata, K.2
  • 24
    • 0027970072 scopus 로고
    • Transfer of Nocardioides fastidiosa Collins and Stackebrandt 1989 to the genus Aeromicrobium as Aeromicrobium fastidiosum comb. nov.
    • Tamura, T. & Yokota, A. (1994). Transfer of Nocardioides fastidiosa Collins and Stackebrandt 1989 to the genus Aeromicrobium as Aeromicrobium fastidiosum comb. nov. Int J Syst Bacteriol 44, 608-611.
    • (1994) Int J Syst Bacteriol , vol.44 , pp. 608-611
    • Tamura, T.1    Yokota, A.2
  • 25
    • 0027968068 scopus 로고
    • CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position specific gap penalties and weight matrix choice
    • Thompson, J. D., Higgins, D. G. & Gibson, T. J. (1994). CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position specific gap penalties and weight matrix choice. Nucleic Acids Res 22, 4673-4680.
    • (1994) Nucleic Acids Res , vol.22 , pp. 4673-4680
    • Thompson, J.D.1    Higgins, D.G.2    Gibson, T.J.3
  • 26
    • 0000770675 scopus 로고
    • International Committee on Systematic Bacteriology. Report of the Ad Hoc Committee on reconciliation of approaches to bacterial systematics
    • Wayne, L. G., Brenner, D. J., Colwell, R. R. & 9 other authors (1987). International Committee on Systematic Bacteriology. Report of the Ad Hoc Committee on reconciliation of approaches to bacterial systematics. Int J Syst Bacteriol 37, 463-464.
    • (1987) Int J Syst Bacteriol , vol.37 , pp. 463-464
    • Wayne, L.G.1    Brenner, D.J.2    Colwell, R.R.3
  • 28
    • 0343554782 scopus 로고    scopus 로고
    • Restriction fragment length polymorphism analysis of PCR-amplified 16S ribosomal DNA for rapid identification of Saccharomonospora strains
    • Yoon, J.-H., Lee, S. T., Kim, S.-B., Kim, W. Y., Goodfellow, M. & Park, Y.-H. (1997). Restriction fragment length polymorphism analysis of PCR-amplified 16S ribosomal DNA for rapid identification of Saccharomonospora strains. Int J Syst Bacteriol 47, 111-114.
    • (1997) Int J Syst Bacteriol , vol.47 , pp. 111-114
    • Yoon, J.-H.1    Lee, S.T.2    Kim, S.-B.3    Kim, W.Y.4    Goodfellow, M.5    Park, Y.-H.6
  • 29
    • 0030743074 scopus 로고    scopus 로고
    • Reclassification of Nocardioides simplex ATCC 13260, ATCC 19565, and ATCC 19566 as Rhodococcus erythropolis
    • Yoon, J.-H., Lee, J.-S., Shin, Y. K., Park, Y.-H. & Lee, S. T. (1997). Reclassification of Nocardioides simplex ATCC 13260, ATCC 19565, and ATCC 19566 as Rhodococcus erythropolis. Int J Syst Bacteriol 47, 904-907.
    • (1997) Int J Syst Bacteriol , vol.47 , pp. 904-907
    • Yoon, J.-H.1    Lee, J.-S.2    Shin, Y.K.3    Park, Y.-H.4    Lee, S.T.5
  • 30
    • 0030870287 scopus 로고    scopus 로고
    • Nocardioides pyridinolyticus sp. nov., a pyridine-degrading bacterium isolated from the oxic zone of an oil shale column
    • Yoon, J.-H., Rhee, S.-K., Lee, J.-S., Park, Y.-H. & Lee, S. T. (1997). Nocardioides pyridinolyticus sp. nov., a pyridine-degrading bacterium isolated from the oxic zone of an oil shale column. Int J Syst Bacteriol 47, 933-938.
    • (1997) Int J Syst Bacteriol , vol.47 , pp. 933-938
    • Yoon, J.-H.1    Rhee, S.-K.2    Lee, J.-S.3    Park, Y.-H.4    Lee, S.T.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.