메뉴 건너뛰기




Volumn 37, Issue 19, 2009, Pages 6414-6428

Adaptation of topoisomerase I paralogs to nuclear and mitochondrial DNA

Author keywords

[No Author keywords available]

Indexed keywords

CELL NUCLEUS DNA; DNA TOPOISOMERASE; MITOCHONDRIAL DNA; MUTANT PROTEIN;

EID: 71049171605     PISSN: 03051048     EISSN: 13624962     Source Type: Journal    
DOI: 10.1093/nar/gkp708     Document Type: Article
Times cited : (23)

References (50)
  • 1
    • 0036085460 scopus 로고    scopus 로고
    • Cellular roles of DNA topoisomerases: A molecular perspective
    • Wang,J.C. (2002) Cellular roles of DNA topoisomerases: A molecular perspective. Nat. Rev. Mol. Cell Biol., 3, 430-440.
    • (2002) Nat. Rev. Mol. Cell Biol , vol.3 , pp. 430-440
    • Wang, J.C.1
  • 2
    • 0034923502 scopus 로고    scopus 로고
    • DNA Topoisomerases: Structure, function, and mechanism
    • Champoux,J.J. (2001) DNA Topoisomerases: Structure, function, and mechanism. Annu. Rev. Biochem., 70, 369-413.
    • (2001) Annu. Rev. Biochem , vol.70 , pp. 369-413
    • Champoux, J.J.1
  • 3
    • 0037126059 scopus 로고    scopus 로고
    • Dual localization of human DNA topoisomerase IIIalpha to mitochondria and nucleus
    • Wang,Y., Lyu,Y.L. and Wang,J.C. (2002) Dual localization of human DNA topoisomerase IIIalpha to mitochondria and nucleus. Proc. Natl Acad. Sci. USA, 99, 12114-12119.
    • (2002) Proc. Natl Acad. Sci. USA , vol.99 , pp. 12114-12119
    • Wang, Y.1    Lyu, Y.L.2    Wang, J.C.3
  • 4
    • 0142088886 scopus 로고    scopus 로고
    • A truncated form of DNA topoisomerase IIbeta associates with the mtDNA genome in mammalian mitochondria
    • Low,R.L., Orton,S. and Friedman,D.B. (2003) A truncated form of DNA topoisomerase IIbeta associates with the mtDNA genome in mammalian mitochondria. Eur. J. Biochem., 270, 4173-186.
    • (2003) Eur. J. Biochem , vol.270 , pp. 4173-4186
    • Low, R.L.1    Orton, S.2    Friedman, D.B.3
  • 6
    • 34247344170 scopus 로고    scopus 로고
    • Mitochondrial topoisomerases and alternative splicing of the human TOP1mt gene
    • Zhang,H., Meng,L.H. and Pommier,Y. (2007) Mitochondrial topoisomerases and alternative splicing of the human TOP1mt gene. Biochimie, 89, 474-481.
    • (2007) Biochimie , vol.89 , pp. 474-481
    • Zhang, H.1    Meng, L.H.2    Pommier, Y.3
  • 7
    • 2342633762 scopus 로고    scopus 로고
    • Thirteen-exon-motif signature for vertebrate nuclear and mitochondrial type IB topoisomerases
    • Zhang,H., Meng,L.H., Zimonjic,D.B., Popescu,N.C. and Pommier,Y. (2004) Thirteen-exon-motif signature for vertebrate nuclear and mitochondrial type IB topoisomerases. Nucleic Acids Res., 32, 2087-2092.
    • (2004) Nucleic Acids Res , vol.32 , pp. 2087-2092
    • Zhang, H.1    Meng, L.H.2    Zimonjic, D.B.3    Popescu, N.C.4    Pommier, Y.5
  • 8
    • 0029102818 scopus 로고
    • On the relationship of the ATP-independent, mitochondrial associated DNA topoisomerase of Saccharomyces cerevisiae to the nuclear topoisomerase I
    • Wang,J., Kearney,K., Derby,M. and Wernette,C.M. (1995) On the relationship of the ATP-independent, mitochondrial associated DNA topoisomerase of Saccharomyces cerevisiae to the nuclear topoisomerase I. Biochem. Biophys Res. Commun., 214, 723-729.
    • (1995) Biochem. Biophys Res. Commun , vol.214 , pp. 723-729
    • Wang, J.1    Kearney, K.2    Derby, M.3    Wernette, C.M.4
  • 9
    • 0030776860 scopus 로고    scopus 로고
    • Mitochondrial DNA topoisomerase I of Saccharomyces cerevisiae
    • Tua,A., Wang,J., Kulpa,V. and Wernette,C.M. (1997) Mitochondrial DNA topoisomerase I of Saccharomyces cerevisiae. Biochimie, 79, 341-350.
    • (1997) Biochimie , vol.79 , pp. 341-350
    • Tua, A.1    Wang, J.2    Kulpa, V.3    Wernette, C.M.4
  • 10
    • 34548627532 scopus 로고    scopus 로고
    • DNA replication and transcription in Mammalian mitochondria
    • Falkenberg,M., Larsson,N.G. and Gustafsson,C.M. (2007) DNA replication and transcription in Mammalian mitochondria. Annu. Rev. Biochem., 76, 679-699.
    • (2007) Annu. Rev. Biochem , vol.76 , pp. 679-699
    • Falkenberg, M.1    Larsson, N.G.2    Gustafsson, C.M.3
  • 12
    • 0029311281 scopus 로고
    • Chimeric green fluorescent protein as a tool for visualizing subcellular organelles in living cells
    • Rizzuto,R., Brini,M., Pizzo,P., Murgia,M. and Pozzan,T. (1995) Chimeric green fluorescent protein as a tool for visualizing subcellular organelles in living cells. Curr. Biol., 5, 635-642.
    • (1995) Curr. Biol , vol.5 , pp. 635-642
    • Rizzuto, R.1    Brini, M.2    Pizzo, P.3    Murgia, M.4    Pozzan, T.5
  • 13
    • 0024556150 scopus 로고
    • Engineering hybrid genes without the use of restriction enzymes: Gene splicing by overlap extension
    • Horton,R.M., Hunt,H.D., Ho,S.N., Pullen,J.K. and Pease,L.R. (1989) Engineering hybrid genes without the use of restriction enzymes: Gene splicing by overlap extension. Gene, 77, 61-68.
    • (1989) Gene , vol.77 , pp. 61-68
    • Horton, R.M.1    Hunt, H.D.2    Ho, S.N.3    Pullen, J.K.4    Pease, L.R.5
  • 14
    • 0037184095 scopus 로고    scopus 로고
    • The N-terminal domain anchors human topoisomerase I at fibrillar centers of nucleoli and nucleolar organizer regions of mitotic chromosomes
    • Christensen,M.O., Barthelmes,H.U., Boege,F. and Mielke,C. (2002) The N-terminal domain anchors human topoisomerase I at fibrillar centers of nucleoli and nucleolar organizer regions of mitotic chromosomes. J. Biol. Chem., 277, 35932-35938.
    • (2002) J. Biol. Chem , vol.277 , pp. 35932-35938
    • Christensen, M.O.1    Barthelmes, H.U.2    Boege, F.3    Mielke, C.4
  • 15
    • 0348149146 scopus 로고    scopus 로고
    • Residues 190-210 of human topoisomerase I are required for enzyme activity in vivo but not in vitro
    • Christensen,M.O., Barthelmes,H.U., Boege,F. and Mielke,C. (2003) Residues 190-210 of human topoisomerase I are required for enzyme activity in vivo but not in vitro. Nucleic Acids Res., 31, 7255-7263.
    • (2003) Nucleic Acids Res , vol.31 , pp. 7255-7263
    • Christensen, M.O.1    Barthelmes, H.U.2    Boege, F.3    Mielke, C.4
  • 17
    • 0031686754 scopus 로고    scopus 로고
    • High-titer human immunodeficiency virus type 1-based vector systems for gene delivery into nondividing cells
    • Mochizuki,H., Schwartz,J.P., Tanaka,K., Brady,R.O. and Reiser,J. (1998) High-titer human immunodeficiency virus type 1-based vector systems for gene delivery into nondividing cells. J. virol., 72, 8873-8883.
    • (1998) J. virol , vol.72 , pp. 8873-8883
    • Mochizuki, H.1    Schwartz, J.P.2    Tanaka, K.3    Brady, R.O.4    Reiser, J.5
  • 19
    • 34547119974 scopus 로고    scopus 로고
    • C-terminal regions of topoisomerase IIalpha and IIbeta determine isoform-specific functioning of the enzymes in vivo
    • Linka,R.M., Porter,A.C., Volkov,A., Mielke,C., Boege,F. and Christensen,M.O. (2007) C-terminal regions of topoisomerase IIalpha and IIbeta determine isoform-specific functioning of the enzymes in vivo. Nucleic Acids Res., 35, 3810-3822.
    • (2007) Nucleic Acids Res , vol.35 , pp. 3810-3822
    • Linka, R.M.1    Porter, A.C.2    Volkov, A.3    Mielke, C.4    Boege, F.5    Christensen, M.O.6
  • 20
    • 0034307416 scopus 로고    scopus 로고
    • An alternate form of Ku80 is required for DNA end-binding activity in mammalian mitochondria
    • Coffey,G. and Campbell,C. (2000) An alternate form of Ku80 is required for DNA end-binding activity in mammalian mitochondria. Nucleic Acids Res., 28, 3793-3800.
    • (2000) Nucleic Acids Res , vol.28 , pp. 3793-3800
    • Coffey, G.1    Campbell, C.2
  • 22
    • 0034783384 scopus 로고    scopus 로고
    • In human keratinocytes the common deletion reflects donor variabilities rather than chronologic aging and can be induced by ultraviolet A irradiation
    • Koch,H., Wittern,K.P. and Bergemann,J. (2001) In human keratinocytes the common deletion reflects donor variabilities rather than chronologic aging and can be induced by ultraviolet A irradiation. J. Invest. Dermatol., 117, 892-897.
    • (2001) J. Invest. Dermatol , vol.117 , pp. 892-897
    • Koch, H.1    Wittern, K.P.2    Bergemann, J.3
  • 23
    • 34250868951 scopus 로고    scopus 로고
    • Expression of catalytic mutants of the mtDNA helicase Twinkle and polymerase POLG causes distinct replication stalling phenotypes
    • Wanrooij,S., Goffart,S., Pohjoismaki,J.L., Yasukawa,T. and Spelbrink,J.N. (2007) Expression of catalytic mutants of the mtDNA helicase Twinkle and polymerase POLG causes distinct replication stalling phenotypes. Nucleic Acids Res., 35, 3238-3251.
    • (2007) Nucleic Acids Res , vol.35 , pp. 3238-3251
    • Wanrooij, S.1    Goffart, S.2    Pohjoismaki, J.L.3    Yasukawa, T.4    Spelbrink, J.N.5
  • 25
    • 0034731326 scopus 로고    scopus 로고
    • A novel nuclear localization signal in human DNA topoisomerase I
    • Mo,Y.Y., Wang,C. and Beck,W.T. (2000) A novel nuclear localization signal in human DNA topoisomerase I. J. Biol. Chem., 275, 41107-41113.
    • (2000) J. Biol. Chem , vol.275 , pp. 41107-41113
    • Mo, Y.Y.1    Wang, C.2    Beck, W.T.3
  • 26
    • 0026632325 scopus 로고
    • Identification of an N-terminal domain of eukaryotic DNA topoisomerase I dispensable for catalytic activity but essential for in vivo function
    • Alsner,J., Svejstrup,J.Q., Kjeldsen,E., Sorensen,B.S. and Westergaard,O. (1992) Identification of an N-terminal domain of eukaryotic DNA topoisomerase I dispensable for catalytic activity but essential for in vivo function. J. Biol. Chem., 267, 12408-12411.
    • (1992) J. Biol. Chem , vol.267 , pp. 12408-12411
    • Alsner, J.1    Svejstrup, J.Q.2    Kjeldsen, E.3    Sorensen, B.S.4    Westergaard, O.5
  • 28
    • 0034717114 scopus 로고    scopus 로고
    • Mitochondrial DNA depletion causes morphological changes in the mitochondrial reticulum of cultured human cells
    • Gilkerson,R.W., Margineantu,D.H., Capaldi,R.A. and Selker,J.M. (2000) Mitochondrial DNA depletion causes morphological changes in the mitochondrial reticulum of cultured human cells. FEBS letters, 474, 1-4.
    • (2000) FEBS letters , vol.474 , pp. 1-4
    • Gilkerson, R.W.1    Margineantu, D.H.2    Capaldi, R.A.3    Selker, J.M.4
  • 29
    • 0024448458 scopus 로고
    • Human cells lacking mtDNA: Repopulation with exogenous mitochondria by complementation
    • King,M.P. and Attardi,G. (1989) Human cells lacking mtDNA: Repopulation with exogenous mitochondria by complementation. Science, 246 500-503.
    • (1989) Science , vol.246 , pp. 500-503
    • King, M.P.1    Attardi, G.2
  • 31
    • 62549138340 scopus 로고    scopus 로고
    • A novel approach for organelle-specific DNA damage targeting reveals different susceptibility of mitochondrial DNA to the anticancer drugs camptothecin and topotecan
    • Diaz de la Loza,M.C. and Wellinger,R.E. (2009) A novel approach for organelle-specific DNA damage targeting reveals different susceptibility of mitochondrial DNA to the anticancer drugs camptothecin and topotecan. Nucleic Acids Res., 37, e26.
    • (2009) Nucleic Acids Res , vol.37
    • Diaz de la Loza, M.C.1    Wellinger, R.E.2
  • 33
    • 0024521381 scopus 로고
    • Studies on the inhibition of mitochondrial DNA replication by 3′-azido-3′-deoxythymidine and other dideoxynucleoside analogs which inhibit HIV-1 replication
    • Simpson,M.V., Chin,C.D., Keilbaugh,S.A., Lin,T.S. and Prusoff,W.H. (1989) Studies on the inhibition of mitochondrial DNA replication by 3′-azido-3′-deoxythymidine and other dideoxynucleoside analogs which inhibit HIV-1 replication. Biochem. Pharmacol., 38, 1033-1036.
    • (1989) Biochem. Pharmacol , vol.38 , pp. 1033-1036
    • Simpson, M.V.1    Chin, C.D.2    Keilbaugh, S.A.3    Lin, T.S.4    Prusoff, W.H.5
  • 34
    • 0036566855 scopus 로고    scopus 로고
    • Modulation of mitochondrial transcription in response to mtDNA depletion and repletion in HeLa cells
    • Seidel-Rogol,B.L. and Shadel,G.S. (2002) Modulation of mitochondrial transcription in response to mtDNA depletion and repletion in HeLa cells. Nucleic Acids Res., 30, 1929-1934.
    • (2002) Nucleic Acids Res , vol.30 , pp. 1929-1934
    • Seidel-Rogol, B.L.1    Shadel, G.S.2
  • 35
    • 0031566428 scopus 로고    scopus 로고
    • Reconstitution of human topoisomerase I by fragment complementation
    • Stewart,L., Ireton,G.C. and Champoux,J.J. (1997) Reconstitution of human topoisomerase I by fragment complementation. J. Mol. Biol., 269 355-372.
    • (1997) J. Mol. Biol , vol.269 , pp. 355-372
    • Stewart, L.1    Ireton, G.C.2    Champoux, J.J.3
  • 36
    • 54849425967 scopus 로고    scopus 로고
    • Mitochondrial Topoisomerase I Sites in the Regulatory D-Loop Region of Mitochondrial DNA
    • Zhang,H. and Pommier,Y. (2008) Mitochondrial Topoisomerase I Sites in the Regulatory D-Loop Region of Mitochondrial DNA. Biochemistry, 47, 11196-11203.
    • (2008) Biochemistry , vol.47 , pp. 11196-11203
    • Zhang, H.1    Pommier, Y.2
  • 37
    • 42449119272 scopus 로고    scopus 로고
    • Role of a tryptophan anchor in human topoisomerase I structure, function and inhibition
    • Laco,G.S. and Pommier,Y. (2008) Role of a tryptophan anchor in human topoisomerase I structure, function and inhibition. Biochem. J., 411, 523-530.
    • (2008) Biochem. J , vol.411 , pp. 523-530
    • Laco, G.S.1    Pommier, Y.2
  • 38
    • 0028787255 scopus 로고
    • Preferential binding of human topoisomerase I to superhelical DNA
    • Madden,K.R., Stewart,L. and Champoux,J.J. (1995) Preferential binding of human topoisomerase I to superhelical DNA. Embo. J., 14, 5399-5409.
    • (1995) Embo. J , vol.14 , pp. 5399-5409
    • Madden, K.R.1    Stewart, L.2    Champoux, J.J.3
  • 39
    • 0034194084 scopus 로고    scopus 로고
    • Functional expression of human DNA topoisomerase I and its subcellular localization in HeLa cells
    • Mo,Y.Y., Wang,P. and Beck,W.T. (2000) Functional expression of human DNA topoisomerase I and its subcellular localization in HeLa cells. Exp. Cell Res., 256, 480-490.
    • (2000) Exp. Cell Res , vol.256 , pp. 480-490
    • Mo, Y.Y.1    Wang, P.2    Beck, W.T.3
  • 40
    • 0037984268 scopus 로고    scopus 로고
    • Inducible expression of a dominant negative DNA polymerase-gamma depletes mitochondrial DNA and produces a rho0 phenotype
    • Jazayeri,M., Andreyev,A., Will,Y., Ward,M., Anderson,C.M. and Clevenger,W. (2003) Inducible expression of a dominant negative DNA polymerase-gamma depletes mitochondrial DNA and produces a rho0 phenotype. J. Biol. Chem., 278, 9823-9830.
    • (2003) J. Biol. Chem , vol.278 , pp. 9823-9830
    • Jazayeri, M.1    Andreyev, A.2    Will, Y.3    Ward, M.4    Anderson, C.M.5    Clevenger, W.6
  • 42
    • 3042695377 scopus 로고    scopus 로고
    • Drosophila mitochondrial transcription factor B2 regulates mitochondrial DNA copy number and transcription in schneider cells
    • Matsushima,Y., Garesse,R. and Kaguni,L.S. (2004) Drosophila mitochondrial transcription factor B2 regulates mitochondrial DNA copy number and transcription in schneider cells. J. Biol. Chem., 279, 26900-26905.
    • (2004) J. Biol. Chem , vol.279 , pp. 26900-26905
    • Matsushima, Y.1    Garesse, R.2    Kaguni, L.S.3
  • 43
    • 0024299511 scopus 로고
    • Transcription-dependent DNA supercoiling in yeast DNA topoisomerase mutants
    • Brill,S.J. and Sternglanz,R. (1988) Transcription-dependent DNA supercoiling in yeast DNA topoisomerase mutants. Cell, 54, 403-411.
    • (1988) Cell , vol.54 , pp. 403-411
    • Brill, S.J.1    Sternglanz, R.2
  • 44
    • 0025872128 scopus 로고
    • A general topoisomerase I-dependent transcriptional repression in the stationary phase in yeast
    • Choder,M. (1991) A general topoisomerase I-dependent transcriptional repression in the stationary phase in yeast. Genes Dev., 5, 2315-2326.
    • (1991) Genes Dev , vol.5 , pp. 2315-2326
    • Choder, M.1
  • 45
    • 0027138674 scopus 로고
    • Identification of human DNA topoisomerase I as a cofactor for activator-dependent transcription by RNA polymerase II
    • Kretzschmar,M., Meisterernst,M. and Roeder,R.G. (1993) Identification of human DNA topoisomerase I as a cofactor for activator-dependent transcription by RNA polymerase II. Proc. Natl Acad. Sci. USA, 90, 11508-11512.
    • (1993) Proc. Natl Acad. Sci. USA , vol.90 , pp. 11508-11512
    • Kretzschmar, M.1    Meisterernst, M.2    Roeder, R.G.3
  • 46
    • 0027186443 scopus 로고
    • DNA topoisomerase I is involved in both repression and activation of transcription
    • Merino,A., Madden,K.R., Lane,W.S., Champoux,J.J. and Reinberg,D. (1993) DNA topoisomerase I is involved in both repression and activation of transcription. Nature, 365, 227-232.
    • (1993) Nature , vol.365 , pp. 227-232
    • Merino, A.1    Madden, K.R.2    Lane, W.S.3    Champoux, J.J.4    Reinberg, D.5
  • 49
    • 0035860240 scopus 로고    scopus 로고
    • M phase-specific association of human topoisomerase IIIbeta with chromosomes
    • Kobayashi,M. and Hanai,R. (2001) M phase-specific association of human topoisomerase IIIbeta with chromosomes. Biochem. Biophys. Res. Commun., 287, 282-287.
    • (2001) Biochem. Biophys. Res. Commun , vol.287 , pp. 282-287
    • Kobayashi, M.1    Hanai, R.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.