Crystal structure of enzyme I of the phosphoenolpyruvate sugar phosphotransferase system in the dephosphorylated state

Journal of Biological Chemistry

Volumn 284, Issue 48, 2009, Pages 33169-33176

  Oberholzer, Anselm E ^a   Schneider, Philipp ^a   Slebold, Christian ^a,b   Baumann, Ulrich ^a   Erni, Bernhard ^a  

^a UNIVERSITY OF BERN   (Switzerland)

^b UNIVERSITY OF OXFORD   (United Kingdom)

Author keywords

[No Author keywords available]

Indexed keywords

ACTIVE SITE; BINDING DOMAIN; CARBON METABOLISM; CARRIER PROTEINS; DIMER INTERFACE; E. COLI; HELICAL HAIRPINS; HISTIDINE RESIDUES; IN-LINE; N-TERMINALS; PHOSPHOENOLPYRUVATES; PHOSPHOTRANSFERASE SYSTEM; S. AUREUS; STAPHYLOCOCCUS AUREUS; SUBDOMAIN; TEMPERATURE FACTOR;

BINDING ENERGY; BINDING SITES; BIOCHEMISTRY; ENZYMES; ESCHERICHIA COLI; SUGAR (SUCROSE); SUGARS;

CRYSTAL STRUCTURE;

CALCIUM ION; CYSTEINE; GLUCOKINASE; HISTIDINE; PHOSPHOENOLPYRUVATE SUGAR PHOSPHOTRANSFERASE;

AMINO TERMINAL SEQUENCE; ARTICLE; BINDING SITE; CARBON METABOLISM; CARBOXY TERMINAL SEQUENCE; CONFORMATIONAL TRANSITION; CONTROLLED STUDY; CRYSTAL STRUCTURE; CRYSTALLIZATION; ENZYME ACTIVITY; ESCHERICHIA COLI; NONHUMAN; PRIORITY JOURNAL; PROTEIN CONFORMATION; PROTEIN DOMAIN; PROTEIN EXPRESSION; STAPHYLOCOCCUS AUREUS; SUGAR TRANSPORT;

AMINO ACID SEQUENCE; BACTERIAL PROTEINS; CRYSTALLOGRAPHY, X-RAY; KINETICS; MODELS, MOLECULAR; MOLECULAR SEQUENCE DATA; PHOSPHOENOLPYRUVATE SUGAR PHOSPHOTRANSFERASE SYSTEM; PHOSPHORYLATION; PROTEIN BINDING; PROTEIN STRUCTURE, SECONDARY; PROTEIN STRUCTURE, TERTIARY; SEQUENCE HOMOLOGY, AMINO ACID; STAPHYLOCOCCUS AUREUS;

BACTERIA (MICROORGANISMS); ESCHERICHIA COLI; STAPHYLOCOCCUS AUREUS;

EID: 70450225333     PISSN: 00219258     EISSN: 1083351X     Source Type: Journal    
DOI: 10.1074/jbc.M109.057612     Document Type: Article

References (47)

1. Görke, B., and Stülke, J. (2008) Nat. Rev. Microbiol. 6, 613-624
2. Deutscher, J., Francke, C., and Postma, P. W. (2006) Microbiol. Mol. Biol. Rev. 70, 939-1031
3. Barabote, R. D., and Saier, M. H., Jr. (2005) Microbiol. Mol. Biol. Rev. 69, 608-634
4. Saier, M. H., Hvorup, R. N., and Barabote, R. D. (2005) Biochem. Soc. Trans. 33, 220-224
5. Robillard, G. T., and Broos, J. (1999) Biochim. Biophys. Acta 1422, 73-104
6. Siebold, C., Flükiger, K., Beutler, R., and Erni, B. (2001) FEBS Lett. 504, 104-111
7. Bolhuis, H., Palm, P., Wende, A., Falb, M., Rampp, M., Rodriguez-Valera, F., Pfeiffer, F., and Oesterhelt, D. (2006) BMC Genomics 7, 169
8. Ginsburg, A., and Peterkofsky, A. (2002) Arch. Biochem. Biophys. 397, 273-278
9. Márquez, J., Reinelt, S., Koch, B., Engelmann, R., Hengstenberg, W., and Scheffzek, K. (2006) J. Biol. Chem. 281, 32508-32515
10. Teplyakov, A., Lim, K., Zhu, P. P., Kapadia, G., Chen, C. C., Schwartz, J., Howard, A., Reddy, P. T., Peterkofsky, A., and Herzberg, O. (2006) Proc. Natl. Acad. Sci. U.S.A. 103, 16218-16223
11. Liao, D. I., Silverton, E., Seok, Y. J., Lee, B. R., Peterkofsky, A., and Davies, D. R. (1996) Structure 4, 861-872
12. Oberholzer, A. E., Bumann, M., Schneider, P., Bächler, C., Siebold, C., Baumann, U., and Erni, B. (2005) J. Mol. Biol. 346, 521-532
13. Garrett, D. S., Seok, Y. J., Peterkofsky, A., Clore, G. M., and Gronenborn, A. M. (1997) Biochemistry 36, 4393-4398
14. Garrett, D. S., Seok, Y. J., Peterkofsky, A., Gronenborn, A. M., and Clore, G. M. (1999) Nat. Struct. Biol. 6, 166-173
15. Peterkofsky, A., Wang, G., Garrett, D. S., Lee, B. R., Seok, Y. J., and Clore, G. M. (2001) J. Mol. Microbiol. Biotechnol. 3, 347-354
16. Herzberg, O., Chen, C. C., Kapadia, G., McGuire, M., Carroll, L. J., Noh, S. J., and Dunaway-Mariano, D. (1996) Proc. Natl. Acad. Sci. U.S.A. 93, 2652-2657
17. Garcia-Alles, L. F., Flükiger, K., Hewel, J., Gutknecht, R., Siebold, C., Schürch, S., and Erni, B. (2002) J. Biol. Chem. 277, 6934-6942
18. Seok, Y. J., Lee, B. R., Gazdar, C., Svenson, I., Yadla, N., and Peterkofsky, A. (1996) Biochemistry 35, 236-242
19. Herzberg, O., Chen, C. C., Liu, S., Tempczyk, A., Howard, A., Wei, M., Ye, D., and Dunaway-Mariano, D. (2002) Biochemistry 41, 780-787
20. Wei, M., Li, Z., Ye, D., Herzberg, O., and Dunaway-Mariano, D. (2000) J. Biol. Chem. 275, 41156-41165
21. Xu, Y., Yankie, L., Shen, L., Jung, Y. S., Mariano, P. S., Dunaway-Mariano, D., and Martin, B. M. (1995) Biochemistry 34, 2181-2187
22. Lim, K., Read, R. J., Chen, C. C., Tempczyk, A., Wei, M., Ye, D., Wu, C., Dunaway-Mariano, D., and Herzberg, O. (2007) Biochemistry 46, 14845-14853
23. Fox, D. K., and Roseman, S. (1986) J. Biol. Chem. 261, 13487-13497
24. Fox, D. K., Meadow, N. D., and Roseman, S. (1986) J. Biol. Chem. 261, 13498-13503
25. Patel, H. V., Vyas, K. A., Mattoo, R. L., Southworth, M., Perler, F. B., Comb, D., and Roseman, S. (2006) J. Biol. Chem. 281, 17579-17587
26. Patel, H. V., Vyas, K. A., Savtchenko, R., and Roseman, S. (2006) J. Biol. Chem. 281, 17570-17578
27. García-Alles, L. F., Alfonso, I., and Erni, B. (2003) Biochemistry 42, 4744-4750
28. Seok, Y. J., Lee, B. R., Zhu, P. P., and Peterkofsky, A. (1996) Proc. Natl. Acad. Sci. U.S.A. 93, 347-351
29. Weigel, N., Kukuruzinska, M. A., Nakazawa, A., Waygood, E. B., and Roseman, S. (1982) J. Biol. Chem. 257, 14477-14491
30. LiCalsi, C., Crocenzi, T. S., Freire, E., and Roseman, S. (1991) J. Biol. Chem. 266, 19519-19527
31. Hesterkamp, T., and Erni, B. (1999) J. Mol. Microbiol. Biotechnol. 1, 309-317
32. Kabsch, W. (1993) J. Appl. Crystallogr. 26, 795-800
33. Kabsch, W. (1988) J. Appl. Crystallogr. 22, 916-924
34. McCoy, A. J., Grosse-Kunstleve, R. W., Storoni, L. C., and Read, R. J. (2005) Acta Crystallogr. D Biol. Crystallogr. 61, 458-464
35. Emsley, P., and Cowtan, K. (2004) Acta Crystallogr. D Biol. Crystallogr. 60, 2126-2132
36. Adams, P. D., Grosse-Kunstleve, R. W., Hung, L. W., Ioerger, T. R., Mc-Coy, A. J., Moriarty, N. W., Read, R. J., Sacchettini, J. C., Sauter, N. K., and Terwilliger, T. C. (2002) Acta Crystallogr. D Biol. Crystallogr. 58, 1948-1954
37. Siebold, C. (2002) Structural Studies on Proteins of the Bacterial Phosphotransferase System. Ph.D thesis, University of Bern
38. Suh, J. Y., Cai, M., Williams, D. C., Jr., and Clore, G. M. (2006) J. Biol. Chem. 281, 8939-8949
39. Suh, J. Y., Cai, M., and Clore, G. M. (2008) J. Biol. Chem. 283, 18980-18989
40. Lahiri, S. D., Zhang, G., Dunaway-Mariano, D., and Allen, K. N. (2003) Science 299, 2067-2071
41. Christen, S., Srinivas, A., Bähler, P., Zeller, A., Pridmore, D., Bieniossek, C., Baumann, U., and Erni, B. (2006) J. Biol. Chem. 281, 23129-23137
42. Nunn, R. S., Marković-Housley, Z., Génovésio-Taverne, J. C., Flükiger, K., Rizkallah, P. J., Jansonius, J. N., Schirmer, T., and Erni, B. (1996) J. Mol. Biol. 259, 502-511
43. Zurbriggen, A., Jeckelmann, J. M., Christen, S., Bieniossek, C., Baumann, U., and Erni, B. (2008) J. Biol. Chem. 283, 35789-35796
44. Gorrell, A., Lawrence, S. H., and Ferry, J. G. (2005) J. Biol. Chem. 280, 10731-10742
45. Lukat, G. S., McCleary, W. R., Stock, A. M., and Stock, J. B. (1992) Proc. Natl. Acad. Sci. U.S.A. 89, 718-722
46. Klein, A. H., Shulla, A., Reimann, S. A., Keating, D. H., and Wolfe, A. J. (2007) J. Bacteriol. 189, 5574-5581
47. Xue, Y., Xu, Y., Liu, Y., Ma, Y., and Zhou, P. (2001) Int. J. Syst. Evol. Microbiol. 51, 1335-1341