Regulation of the Dha operon of Lactococcus lactis: A deviation from the rule followed by the TetR family of transcription regulators

Journal of Biological Chemistry

Volumn 281, Issue 32, 2006, Pages 23129-23137

  Christen, Sandra ^a   Srinivas, Annapurna ^a   Bähler, Priska ^a   Zeller, Anja ^a   Pridmore, David ^b   Bieniossek, Christoph ^a   Baumann, Ulrich ^a   Erni, Bernhard ^a  

^a UNIVERSITY OF BERN   (Switzerland)

^b NESTLÉ RESEARCH CENTER   (Switzerland)

Author keywords

[No Author keywords available]

Indexed keywords

BIOCHEMISTRY; BIOLOGICAL MEMBRANES; CHARACTERIZATION; DNA; METABOLISM; MOLECULAR BIOLOGY;

CONFORMATIONAL CHANGE; DHA PROMOTERS; DIHYDROXYACETONE (DHA) KINASES; LACTOCOCCUS LACTIS;

ENZYMES;

DEOXYRIBONUCLEASE I; DIHYDROXYACETONE; DIHYDROXYACETONE KINASE Q; DIHYDROXYACETONE KINASE S; HISTIDINE; PHOSPHOTRANSFERASE; UNCLASSIFIED DRUG;

AMINO ACID SEQUENCE; ARTICLE; BINDING AFFINITY; COVALENT BOND; ENZYME BINDING; ENZYME STRUCTURE; GENE CONTROL; LACTOCOCCUS LACTIS; NONHUMAN; OPERON; PRIORITY JOURNAL; PROMOTER REGION; PROTEIN EXPRESSION; STRUCTURE ANALYSIS; TRANSCRIPTION REGULATION;

AMINO ACID SEQUENCE; DEOXYRIBONUCLEASE I; HISTIDINE; LACTOCOCCUS LACTIS; MODELS, GENETIC; MOLECULAR SEQUENCE DATA; OPERON; PHOSPHOTRANSFERASES (ALCOHOL GROUP ACCEPTOR); PROMOTER REGIONS (GENETICS); PROTEIN BINDING; PROTEIN CONFORMATION; REPRESSOR PROTEINS; SEQUENCE HOMOLOGY, AMINO ACID; TRANSCRIPTION, GENETIC;

LACTOCOCCUS LACTIS;

EID: 33747373583     PISSN: 00219258     EISSN: 1083351X     Source Type: Journal    
DOI: 10.1074/jbc.M603486200     Document Type: Article

References (33)

1. Erni, B., Siebold, C., Christen, S., Srinivas, A., Oberholzer, A., and Baumann, U. (2006) Cell Mol. Life Sci. 63, 890-900
2. Gutknecht, R., Beutler, R., Garcia Alles, L. F., Baumann, U., and Erni, B. (2001) EMBO J. 20, 2480-2486
3. Nunn, R. S., Markovic-Housley, Z., Génovésio-Taverne, J. C., Flükiger, K., Rizkallah, P. J., Jansonius, J. N., Schirmer, T., and Erni, B. (1996) J. Mol. Biol. 259, 502-511
4. Siebold, C., Flükiger, K., Beutler, R., and Erni, B. (2001) FEBS Lett. 504, 104-111
5. Garcia-Alles, L. F., Siebold, C., Nyffeler, T. L., Flukiger-Bruhwiler, K., Schneider, P., Burgi, H. B., Baumann, U., and Erni, B. (2004) Biochemistry 43, 13037-13045
6. Siebold, C., Garcia-Alles, L. F., Erni, B., and Baumann, U. (2003) Proc. Natl. Acad. Sci. U. S. A. 100, 8188-8192
7. Bachler, C., Flukiger-Bruhwiler, K., Schneider, P., Bahler, P., and Erni, B. (2005) J. Biol. Chem. 280, 18321-18325
8. Bachler, C., Schneider, P., Bahler, P., Lustig, A., and Erni, B. (2005) EMBO J. 24, 283-293
9. Buck, M., Gallegos, M. T., Studholme, D. J., Guo, Y., and Gralla, J. D. (2000) J. Bacteriol. 182, 4129-4136
10. Schneider, T. R., and Sheldrick, G. M. (2002) Acta Crystallogr. Sect. D. Biol. Crystallogr. 58, 1772-1779
11. de La Fortelle, E., and Bricogne, G. (1997) Methods Enzymol. 276, 472-494
12. Abrahams, J. P., and Leslie, A. G. (1996) Acta Crystallogr. Sect. D. Biol. Crystallogr. 52, 30-42
13. Perrakis, A., Morris, R., and Lamzin, V. S. (1999) Nat. Struct. Biol. 6, 458-463
14. Jones, T. A., Zou, J. Y., and Cowan, S. W. (1991) Acta Crystallogr. Sect. A 47, 110-119
15. Murshudov, G. N., Vagin, A. A., Lebedev, A., Wilson, K. S., and Dodson, E. J. (1999) Acta Crystallogr. Sect. D. 55, 247-255
16. Laskowski, R. A., MacArthur, M. W., Moss, D. S., and Thornton, J. M. (1993) J. Appl. Crystallogr. 26, 283-291
17. Holm, L., and Sander, C. (1996) Science 273, 595-603
18. McCoy, A. J., Grosse-Kunstleve, R. W., Storoni, L. C., and Read, R. J. (2005) Acta Crystallogr. Sect. D. Biol. Crystallogr. 61, 458-464
19. Griffith, K. L., and Wolf, R. E., Jr. (2002) Biochem. Biophys. Res. Commun. 290, 397-402
20. Miller, J. F. (1992) A Short Course in Bacterial Genetics, pp. 72-74, Cold Spring Harbor Laboratory Press, Cold Spring Harbor, New York
21. Ramos, J. L., Martinez-Bueno, M., Molina-Henares, A. J., Teran, W., Watanabe, K., Zhang, X., Gallegos, M. T., Brennan, R., and Tobes, R. (2005) Microbiol. Mol. Biol. Rev. 69, 326-356
22. Schumacher, M. A., Miller, M. C., Grkovic, S., Brown, M. H., Skurray, R. A., and Brennan, R. G. (2002) EMBO J. 21, 1210-1218
23. Schumacher, M. A., Miller, M. C., Grkovic, S., Brown, M. H., Skurray, R. A., and Brennan, R. G. (2001) Science 294, 2158-2163
24. Hinrichs, W., Kisker, C., Duvel, M., Muller, A., Tovar, K., Hillen, W., and Saenger, W. (1994) Science 264, 418-420
25. Orth, P., Schnappinger, D., Hillen, W., Saenger, W., and Hinrichs, W. (2000) Nat. Struct. Biol. 7, 215-219
26. Siebold, C., Arnold, I., Garcia-Alles, L. F., Baumann, U., and Erni, B. (2003) J. Biol. Chem. 278, 48236-48244
27. Goodsell, D. S., and Dickerson, R. E. (1994) Nucleic Acids Res. 22, 5497-5503
28. Glaser, F., Pupko, T., Paz, I., Bell, R. E., Bechor-Shental, D., Martz, E., and Ben Tal, N. (2003) Bioinformatics 19, 163-164
29. Gralla, J. D., and Collado-Vides, J. (1996) in Escherichia coli and Salmonella typhimurium: Cellular and Molecular Biology (Neidhardt, F. C., Curtiss R., Ingraham, J. L., Lin, E. C. C., Low, K. B., Magasanik, B., Reznikoff, W. S., Riley, M., Schaechter, M., and Umbarger, H. E., eds) pp. 1232-1246, ASM Press, Washington, D. C.
30. Hillen, W., and Berens, C. (1994) Annu. Rev. Microbiol. 48, 345-369
31. Grkovic, S., Brown, M. H., Roberts, N. J., Paulsen, I. T., and Skurray, R. A. (1998) J. Biol. Chem. 273, 18665-18673
32. Gossen, M., Freundlieb, S., Bender, G., Muller, G., Hillen, W., and Bujard, H. (1995) Science 268, 1766-1769
33. DiMarco, A. A., and Ornston, L. N. (1994) J. Bacteriol. 176, 4277-4284