Relationships between hematopoiesis and hepatogenesis in the midtrimester fetal liver characterized by dynamic transcriptomic and proteomic profiles

PLoS ONE

Volumn 4, Issue 10, 2009, Pages

  Guo, Yuanbiao ^a,f   Zhang, Xuequn ^a,c   Huang, Jian ^b   Zeng, Yan ^a   Liu, Wei ^a   Geng, Chao ^a   Li, Ka Wan ^e   Yang, Dong ^a   Wu, Songfeng ^a   Wei, Handong ^a   Han, Zeguang ^b   Qian, Xiaohong ^a   Jiang, Ying ^a   He, Fuchu ^a,d  

^a BEIJING INSTITUTE OF RADIATION MEDICINE   (China)

^b CHINESE NATIONAL HUMAN GENOME CENTER AT SHANGHAI   (China)

^c ZHEJIANG UNIVERSITY SCHOOL OF MEDICINE   (China)

^d FUDAN UNIVERSITY   (China)

^e VU UNIVERSITY AMSTERDAM   (Netherlands)

^f Third People's Hospital of Chengdu   (China)

Author keywords

[No Author keywords available]

Indexed keywords

GLYCAN; KRUPPEL LIKE FACTOR; LECTIN; TRANSCRIPTION FACTOR; XENOBIOTIC AGENT; ZINC FINGER PROTEIN; PROTEOME;

ANIMAL TISSUE; ARTICLE; BLOOD CLOTTING; CARBOHYDRATE SYNTHESIS; CATABOLISM; CONTROLLED STUDY; EMBRYO; FETUS; FETUS LIVER; HEMATOPOIESIS; IMMUNE RESPONSE; INTERMETHOD COMPARISON; LIVER DEVELOPMENT; LIVER FUNCTION; MICROENVIRONMENT; MOUSE; NONHUMAN; PROTEIN EXPRESSION; PROTEOMICS; STEROL METABOLISM; TRANSCRIPTOMICS; ANIMAL; C57BL MOUSE; DNA MICROARRAY; GENE EXPRESSION PROFILING; GENE EXPRESSION REGULATION; GENETIC TRANSCRIPTION; LIVER; MASS SPECTROMETRY; METABOLISM; METHODOLOGY; PATHOLOGY; PRENATAL DEVELOPMENT; TIME; TISSUE DISTRIBUTION; TWO DIMENSIONAL GEL ELECTROPHORESIS;

ANIMALS; ELECTROPHORESIS, GEL, TWO-DIMENSIONAL; GENE EXPRESSION PROFILING; GENE EXPRESSION REGULATION, DEVELOPMENTAL; HEMATOPOIESIS; LIVER; MICE; MICE, INBRED C57BL; OLIGONUCLEOTIDE ARRAY SEQUENCE ANALYSIS; PROTEOME; PROTEOMICS; SPECTROMETRY, MASS, MATRIX-ASSISTED LASER DESORPTION-IONIZATION; TIME FACTORS; TISSUE DISTRIBUTION; TRANSCRIPTION, GENETIC;

EID: 70449595631     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0007641     Document Type: Article

References (49)

1. Mikkola HK, Orkin SH (2006) The journey of developing hematopoietic stem cells. Development 133: 3733-3744.
2. Peault B (1996) Hematopoietic stem cell emergence in embryonic life: developmental hematology revisited. J Hematother 5: 369-378.
3. Kinoshita T, Miyajima A (2002) Cytokine regulation of liver development. Biochim Biophys Acta 1592: 303-312.
4. Morrison SJ, Hemmati HD, Wandycz AM, Weissman IL (1995) The purification and characterization of fetal liver hematopoietic stem cells. Proc Natl Acad Sci U S A 92: 10302-10306.
5. Ikuta K, Weissman IL (1992) Evidence that hematopoietic stem cells express mouse c-kit but do not depend on steel factor for their generation. Proc Natl Acad Sci U S A 89: 1502-1506.
6. Wolber FM, Leonard E, Michael S, Orschell-Traycoff CM, Yoder MC, et al. (2002) Roles of spleen and liver in development of the murine hematopoietic system. Exp Hematol 30: 1010-1019.
7. Bowie MB, Kent DG, Dykstra B, McKnight KD, McCaffrey L, et al. (2007) Identification of a new intrinsically timed developmental checkpoint that reprograms key hematopoietic stem cell properties. Proc Natl Acad Sci U S A 104: 5878-5882.
8. Lansdorp PM, Dragowska W, Mayani H (1993) Ontogeny-related changes in proliferative potential of human hematopoietic cells. J Exp Med 178: 787-791.
9. Kikuchi K, Kondo M (2006) Developmental switch of mouse hematopoietic stem cells from fetal to adult type occurs in bone marrow after birth. Proc Natl Acad Sci U S A 103: 17852-17857.
10. Takeuchi M, Sekiguchi T, Hara T, Kinoshita T, Miyajima A (2002) Cultivation of aorta-gonad-mesonephros-derived hematopoietic stem cells in the fetal liver microenvironment amplifies long-term repopulating activity and enhances engraftment to the bone marrow. Blood 99: 1190-1196.
11. Slaper-Cortenbach I, Ploemacher R, Lowenberg B (1987) Different stimulative effects of human bone marrow and fetal liver stromal cells on erythropoiesis in long-term culture. Blood 69: 135-139.
12. Zhang X, Guo Y, Song Y, Sun W, Yu C, et al. (2006) Proteomic analysis of individual variation in normal livers of human beings using difference gel electrophoresis. Proteomics 6: 5260-5268.
13. Eisen MB, Spellman PT, Brown PO, Botstein D (1998) Cluster analysis and display of genome-wide expression patterns. Proc Natl Acad Sci U S A 95: 14863-14868.
14. Su AI, Wiltshire T, Batalov S, Lapp H, Ching KA, et al. (2004) A gene atlas of the mouse and human protein-encoding transcriptomes. Proc Natl Acad Sci U S A 101: 6062-6067.
15. Calvano SE, Xiao W, Richards DR, Felciano RM, Baker HV, et al. (2005) A network-based analysis of systemic inflammation in humans. Nature 437: 1032-1037.
16. Katayama Y, Battista M, Kao WM, Hidalgo A, Peired AJ, et al. (2006) Signals from the sympathetic nervous system regulate hematopoietic stem cell egress from bone marrow. Cell 124: 407-421.
17. Ivanova NB, Dimos JT, Schaniel C, Hackney JA, Moore KA, et al. (2002) A stem cell molecular signature. Science 298: 601-604.
18. Rebel VI, Kung AL, Tanner EA, Yang H, Bronson RT, et al. (2002) Distinct roles for CREB-binding protein and p300 in hematopoietic stem cell selfrenewal. Proc Natl Acad Sci U S A 99: 14789-14794.
19. Li J, Sejas DP, Rani R, Koretsky T, Bagby GC, et al. (2006) Nucleophosmin regulates cell cycle progression and stress response in hematopoietic stem/progenitor cells. J Biol Chem 281: 16536-16545.
20. Stopka T, Skoultchi AI (2003) The ISWI ATPase Snf2h is required for early mouse development. Proc Natl Acad Sci U S A 100: 14097-14102.
21. Motoyama N, Wang F, Roth KA, Sawa H, Nakayama K, et al. (1995) Massive cell death of immature hematopoietic cells and neurons in Bcl-x-deficient mice. Science 267: 1506-1510.
22. Kamminga LM, Bystrykh LV, de Boer A, Houwer S, Douma J, et al. (2006) The Polycomb group gene Ezh2 prevents hematopoietic stem cell exhaustion. Blood 107: 2170-2179.
23. Ying W, Jiang Y, Guo L, Hao Y, Zhang Y, et al. (2006) A dataset of human fetal liver proteome identified by subcellular fractionation and multiple protein separation and identification technology. Mol Cell Proteomics 5: 1703-1707.
24. Peng H, Begg GE, Harper SL, Friedman JR, Speicher DW, et al. (2000) Biochemical analysis of the Kruppel-associated box (KRAB) transcriptional repression domain. J Biol Chem 275: 18000-18010.
25. Ho AD, Wagner W (2007) The beauty of asymmetry: asymmetric divisions and self-renewal in the haematopoietic system. Curr Opin Hematol 14: 330-336.
26. Yang Y, Yang F, Xiong Z, Yan Y, Wang X, et al. (2005) An N-terminal region of translationally controlled tumor protein is required for its antiapoptotic activity. Oncogene 24: 4778-4788.
27. Sitnicka E, Ruscetti FW, Priestley GV, Wolf NS, Bartelmez SH (1996) Transforming growth factor beta 1 directly and reversibly inhibits the initial cell divisions of long-term repopulating hematopoietic stem cells. Blood 88: 82-88.
28. Byrd N, Becker S, Maye P, Narasimhaiah R, St-Jacques B, et al. (2002) Hedgehog is required for murine yolk sac angiogenesis. Development 129: 361-372.
29. Nogueira MM, Mitjavila-Garcia MT, Le Pesteur F, Filippi MD, Vainchenker W, et al. (2000) Regulation of Id gene expression during embryonic stem cellderived hematopoietic differentiation. Biochem Biophys Res Commun 276: 803-812.
30. Galan-Caridad JM, Harel S, Arenzana TL, Hou ZE, Doetsch FK, et al. (2007) Zfx controls the self-renewal of embryonic and hematopoietic stem cells. Cell 129: 345-357.
31. Kinoshita T, Sekiguchi T, Xu MJ, Ito Y, Kamiya A, et al. (1999) Hepatic differentiation induced by oncostatin M attenuates fetal liver hematopoiesis. Proc Natl Acad Sci U S A 96: 7265-7270.
32. Alpy F, Tomasetto C (2005) Give lipids a START: the StAR-related lipid transfer (START) domain in mammals. J Cell Sci 118: 2791-2801.
33. Chagraoui J, Lepage-Noll A, Anjo A, Uzan G, Charbord P (2003) Fetal liver stroma consists of cells in epithelial-to-mesenchymal transition. Blood 101: 2973-2982.
34. Ohno N, Izawa A, Hattori M, Kageyama R, Sudo T (2001) dlk inhibits stem cell factor-induced colony formation of murine hematopoietic progenitors: Hes-1-independent effect. Stem Cells 19: 71-79.
35. Sandhu JS, Petkov PM, Dabeva MD, Shafritz DA (2001) Stem cell properties and repopulation of the rat liver by fetal liver epithelial progenitor cells. Am J Pathol 159: 1323-1334.
36. Tanimizu N, Nishikawa M, Saito H, Tsujimura T, Miyajima A (2003) Isolation of hepatoblasts based on the expression of Dlk/Pref-1. J Cell Sci 116: 1775-1786.
37. Nomura S, Ogami K, Kawamura K, Tsukamoto I, Kudo Y, et al. (1997) Cellular localization of thrombopoietin mRNA in the liver by in situ hybridization. Exp Hematol 25: 565-572.
38. Kiel MJ, Morrison SJ (2008) Uncertainty in the niches that maintain haematopoietic stem cells. Nat Rev Immunol 8: 290-301.
39. Sattler M, Winkler T, Verma S, Byrne CH, Shrikhande G, et al. (1999) Hematopoietic growth factors signal through the formation of reactive oxygen species. Blood 93: 2928-2935.
40. Sato EF, Nakagawa E, Hiramoto K, Yamamasu S, Moriyama-Shimamoto I, et al. (2004) Oxidative stress promotes the regression of fetal liver hemopoiesis. Biochemistry (Mosc) 69: 18-22, 11 p following 74.
41. Kung AL, Wang S, Klco JM, Kaelin WG, Livingston DM (2000) Suppression of tumor growth through disruption of hypoxia-inducible transcription. Nat Med 6: 1335-1340.
42. Dong Z, Wang J (2004) Hypoxia selection of death-resistant cells. A role for Bcl-X(L). J Biol Chem 279: 9215-9221.
43. Fan CY, Pan J, Usuda N, Yeldandi AV, Rao MS, et al. (1998) Steatohepatitis, spontaneous peroxisome proliferation and liver tumors in mice lacking peroxisomal fatty acyl-CoA oxidase. Implications for peroxisome proliferatoractivated receptor alpha natural ligand metabolism. J Biol Chem 273: 15639-15645.
44. Rudnick DA, Perlmutter DH, Muglia LJ (2001) Prostaglandins are required for CREB activation and cellular proliferation during liver regeneration. Proc Natl Acad Sci U S A 98: 8885-8890.
45. Rasanen TL, Alhonen L, Sinervirta R, Keinanen T, Herzig KH, et al. (2002) A polyamine analogue prevents acute pancreatitis and restores early liver regeneration in transgenic rats with activated polyamine catabolism. J Biol Chem 277: 39867-39872.
46. Zhao R, Duncan SA (2005) Embryonic development of the liver. Hepatology 41: 956-967.
47. Skorin C, Necochea C, Johow V, Soto U, Grau AM, et al. (1992) Peroxisomal fatty acid oxidation and inhibitors of the mitochondrial carnitine palmitoyltransferase I in isolated rat hepatocytes. Biochem J 281 (Pt2): 561-567.
48. Hayhurst GP, Lee YH, Lambert G, Ward JM, Gonzalez FJ (2001) Hepatocyte nuclear factor 4alpha (nuclear receptor 2A1) is essential for maintenance of hepatic gene expression and lipid homeostasis. Mol Cell Biol 21: 1393-1403.
49. Dikalov S, Griendling KK, Harrison DG (2007) Measurement of reactive oxygen species in cardiovascular studies. Hypertension 49: 717-727.