Mass spectrometry characterization of species-specific peptides from arginine kinase for the identification of commercially relevant shrimp species

Journal of Proteome Research

Volumn 8, Issue 11, 2009, Pages 5356-5362

  Ortea, Ignacio ^a   Cañas, Benito ^b   Gallardo, José M ^a  

^a INSTITUTO DE INVESTIGACIONES MARINAS   (Spain)

^b UNIVERSIDAD COMPLUTENSE DE MADRID   (Spain)

Author keywords

Arginine kinase; MS MS; Proteomics; Shrimps; Species identification

Indexed keywords

ARGININE KINASE; PEPTIDE DERIVATIVE;

ARTICLE; DECAPODA (CRUSTACEA); ELECTROSPRAY MASS SPECTROMETRY; MATRIX ASSISTED LASER DESORPTION IONIZATION TIME OF FLIGHT MASS SPECTROMETRY; NONHUMAN; PEPTIDE ANALYSIS; PRIORITY JOURNAL; PROTEOMICS; SEA FOOD; SHRIMP; SPECIES; SPECIES IDENTIFICATION; TANDEM MASS SPECTROMETRY;

ANIMALS; ARGININE KINASE; DATABASES, PROTEIN; DECAPODA (CRUSTACEA); MASS SPECTROMETRY; MOLECULAR SEQUENCE DATA; PEPTIDE MAPPING; PEPTIDES; SEQUENCE ALIGNMENT; SEQUENCE ANALYSIS, PROTEIN; SPECIES SPECIFICITY; SPECTROMETRY, MASS, ELECTROSPRAY IONIZATION; SPECTROMETRY, MASS, MATRIX-ASSISTED LASER DESORPTION-IONIZATION;

DECAPODA (CRUSTACEA);

EID: 70449336603     PISSN: 15353893     EISSN: None     Source Type: Journal    
DOI: 10.1021/pr900663d     Document Type: Article

References (27)

1. Holthius, L. B. FAO Species Catalogue: Shrimps and Prawns of the World. An Annotated Catalogue of Species of Interest to Fisheries; FAO Fish. Synop. (125); FAO: Rome, Italy, 1980, Vol.1; pp 1-271.
2. Pérez-Farfante, I.; Kensley, B., Penaeoid and Sergestoid Shrimps and Prawns of the World. Keys and Diagnoses for the Families and Genera; Éditions du Muséum National d'Histoire Naturelle: Paris, France, 1997.
3. Council Regulation (EC) No. 104/2000 of the European Parliament of Dec. 17, 1999 on the common organization of the markets in fishery and aquaculture products.
4. Royal Decree 121/2004 of Jan. Twenty-three (BOE No. 31, Feb. 5, 2004) from Ministry of Agriculture, Fisheries and Food, Spain.
5. Civera, T. Species identification and safety of fish products. Vet. Res. Commun. 2003, 27, 481-489. (Pubitemid 37121383)
6. Maggioni, R.; Rogers, A. D.; Maclean, N.; Incao, F. Molecular phylogeny of Western Atlantic Farfantepenaeus and Litopenaeus shrimp based on mitochondrial 16S partial sequences. Mol. Phylogenet. Evol. 2001, 18, 66-73. (Pubitemid 32113877)
7. Baldwin, J. D.; Bass, A. L.; Bowen, B. W.; Clark, W. H. Molecular phylogeny and biogeography of the marine shrimp Penaeus. Mol. Phylogenet. Evol. 1998, 10, 399-407. (Pubitemid 128349346)
8. Quan, J.; Zhuang, Z.; Deng, J.; Dai, J.; Zhang, Y.-p. Phylogenetic relationships of 12 Penaeoidea shrimp species deduced from mitochondrial DNA sequences. Biochem. Genet. 2004, 42, 331-345.
9. Lavery, S.; Chan, T. Y.; Tam, Y. K.; Chu, K. H. Phylogenetic relationships and evolutionary history of the shrimp genus Penaeus s.l. derived from mitochondrial DNA. Mol. Phylogenet. Evol. 2004, 31, 39-49.
10. Voloch, C. M.; Freire, P. R.; Russo, C. A. M. Molecular phylogeny of penaeid shrimps inferred from two mitochondrial markers. Genet. Mol. Res. 2005, 4, 668-674.
11. Brzezinski, J. L. Detection of crustacean DNA and species identification using a PCR-restriction fragment length polymorphism method. J. Food Prot. 2005, 68, 1866-1873. (Pubitemid 41446119)
12. Pascoal, A.; Barros-Velázquez, J.; Cepeda, A.; Gallardo, J. M.; Calo-Mata, P. A polymerase chain reaction-restriction fragment length polymorphism method based on the analysis of a 16S rRNA/tRNA Val mitochondrial region for species identification of commercial penaeid shrimps (Crustacea: Decapoda: Penaeoidea) of food interest. Electrophoresis 2008, 29, 499-509. (Pubitemid 351201527)
13. Piñeiro, C.; Barros-Velázquez, J.; Vázquez, J.; Figueras, A.; Gallardo, M. Proteomics as a tool for the investigation of seafood and other marine products. J. Proteome Res. 2003, 2, 127-135. (Pubitemid 37099048)
14. Martinez, I.; Friis, T. J. Application of proteome analysis to seafood authentication. Proteomics 2004, 4, 347-354. (Pubitemid 38235251)
15. López, J. L.; Marina, A.; Á lvarez, G.; Vázquez, J. Application of proteomics for fast identification of species-specific peptides from marine species. Proteomics 2002, 2, 1658-1665.
16. Carrera, M.; Cañ as, B.; Piñ eiro, C.; Vázquez, J.; Gallardo, J. M. Identification of commercial hake and grenadier species by proteomic analysis of the parvalbumin fraction. Proteomics 2006, 6, 5278-5287.
17. Carrera, M.; Canas, B.; Pineiro, C.; Vazquez, J.; Gallardo, J. M. De novo mass spectrometry sequencing and characterization of species-specific peptides from nucleoside diphosphate kinase B for the classification of commercial fish species belonging to the family Merlucciidae. J. Proteome Res. 2007, 6, 3070-3080.
18. An, H.; Marshall, M. R.; Otwell, W. S.; Wei, C. I. Species identification of raw and boiled shrimp by a urea gel isoelectric focusing technique. J. Food Sci. 1989, 54, 233-236.
19. Civera, T.; Parisi, E. The use of sodium dodecyl sulfate polyacrylamide gel electrophoresis for the identification of raw and cooked shrimps and crabs. Ital. J. Food Sci. 1991, 3, 149-157.
20. Shanti, K. N.; Martin, B. M.; Nagpal, S.; Metcalfe, D. D.; Rao, P. V. Identification of tropomyosin as the major shrimp allergen and characterization of its IgE-binding epitopes. J. Immunol. 1993, 151, 5354-5363. (Pubitemid 23332345)
21. Ortea, I.; Cañ as, B.; Calo-Mata, P.; Barros-Velázquez, J.; Gallardo, J. M. Arginine kinase peptide mass fingerprinting as a proteomic approach for species identification and taxonomic analysis of commercially relevant shrimp species. J. Agric. Food Chem. 2009, 57, 5665-5672.
22. Morrison, J. F. Arginine kinase and other invertebrate guanidine kinases. In The Enzymes, 3rd ed.; Boyer, P. D., Ed.; Academic Press: New York, 1973; Vol.8, pp 457-486.
23. Watts, D. C. Creatine kinase (adenosine 5′-triphosphate creatine phosphotransferase. In The Enzymes, 3rd ed.; Boyer, P. D., Ed.; Academic Press: New York, 1973; Vol.8, pp 383-455.
24. France, R. M.; Sellers, D. S.; Grossman, S. H. Purification, characterization, and hydrodynamic properties of arginine kinase from Gulf shrimp (Penaeus aztecus). Arch. Biochem. Biophys. 1997, 345, 73-78.
25. Yu, C.-J.; Lin, Y.-F.; Chiang, B.-L.; Chow, L.-P. Proteomics and immunological analysis of a novel shrimp allergen, Pen m 2. J. Immunol. 2003, 170, 445-453.
26. Piñ eiro, C.; Barros-Velázquez, J.; Sotelo, C. G.; Pérez-Martín, R. I.; Gallardo, J. M. Two-dimensional electrophoretic study of the water-soluble protein fraction in white muscle of gadoid fish species. J. Agric. Food Chem. 1998, 46, 3991-3997.
27. Jensen, O. N.; Wilm, M.; Shevchenko, A.; Mann, M., Sample preparation methods for mass spectrometric peptide mapping directly from 2-DE gels. In 2-D Proteome Analysis Protocols; Link, A. J., Ed.; Humana Press: Totowa, NJ, 1999; pp 513-530.