First multi-locus sequence typing scheme for Arcobacter spp.

BMC Microbiology

Volumn 9, Issue , 2009, Pages

  Miller, William G ^a   Wesley, Irene V ^b   On, Stephen L W ^c   Houf, Kurt ^d   Mégraud, Francis ^e   Wang, Guilin ^a   Yee, Emma ^a   Srijan, Apichai ^f   Mason, Carl J ^f  

^a WESTERN REGIONAL RESEARCH CENTER   (United States)

^b AGRICULTURAL RESEARCH SERVICE   (United States)

^c ESR Christchurch Science Centre   (New Zealand)

^d GHENT UNIVERSITY   (Belgium)

^e UNIVERSITÉ DE BORDEAUX   (France)

^f ARMED FORCES RESEARCH INSTITUTE OF MEDICAL SCIENCES   (Thailand)

Author keywords

[No Author keywords available]

Indexed keywords

ALLELE; ARCOBACTER; ARCOBACTER BUTZLERI; ARCOBACTER CIBARIUS; ARCOBACTER CRYAEROPHILUS; ARCOBACTER SKIRROWII; ARCOBACTER THEREIUS; ARTICLE; BACTERIAL GENE; BACTERIAL STRAIN; BACTERIUM IDENTIFICATION; BACTERIUM ISOLATION; CAMPYLOBACTER COLI; CAMPYLOBACTER FETUS; CAMPYLOBACTER JEJUNI; GENE IDENTIFICATION; GENE LOCUS; HOST; MULTILOCUS SEQUENCE TYPING; NONHUMAN; CLASSIFICATION; DNA SEQUENCE; GENETIC VARIABILITY; GENETICS; METHODOLOGY; PHYLOGENY;

ARCOBACTER; ARCOBACTER BUTZLERI; ARCOBACTER CIBARIUS; ARCOBACTER CRYAEROPHILUS; ARCOBACTER SKIRROWII; CAMPYLOBACTER JEJUNI;

BACTERIAL DNA;

ALLELES; ARCOBACTER; BACTERIAL TYPING TECHNIQUES; DNA, BACTERIAL; GENES, BACTERIAL; GENETIC VARIATION; PHYLOGENY; SEQUENCE ANALYSIS, DNA;

EID: 70350444469     PISSN: 14712180     EISSN: 14712180     Source Type: Journal    
DOI: 10.1186/1471-2180-9-196     Document Type: Article

References (37)

1. Arcobacter cibarius sp. nov., isolated from broiler carcasses. K Houf SL On T Coenye J Mast J Van Hoof P Vandamme, Int J Syst Evol Microbiol 2005 55 713 717
2. Campylobacter nitrofigilis sp nov., a nitrogen fixing bacterium associated with roots of Spartina aterniflora Loisel. CR McClung DG Patriquin RE Davis, Int J Syst Bacteriol 1983 33 605 612
3. Arcobacter halophilus sp. nov., the first obligate halophile in the genus Arcobacter. SP Donachie JP Bowman SL On M Alam, Int J Syst Evol Microbiol 2005 55 1271 1277
4. Characterization of an autotrophic sulfide-oxidizing marine Arcobacter sp. that produces filamentous sulfur. CO Wirsen SM Sievert CM Cavanaugh SJ Molyneaux A Ahmad LT Taylor EF DeLong CD Taylor, Appl Environ Microbiol 2002 68 316 325
5. Arcobacter mytili sp. nov., an indoxyl acetate-hydrolysis-negative bacterium isolated from mussels. L Collado I Cleenwerck S Van Trappen P De Vos MJ Figueras, Int J Syst Evol Microbiol 2009 59 1391 1396
6. Arcobacter thereius sp. nov, isolated from pigs and ducks. K Houf SLW On T Coenye L Debruyne S De Smet P Vandamme, Int J Syst Evol Microbiol
7. Arcobacter marinus sp. nov. HM Kim CY Hwang BC Cho, Int J Syst Evol Microbiol
8. Isolation of various Arcobacter species from domestic geese (Anser anser). HI Atabay A Unver M Sahin S Otlu M Elmali H Yaman, Vet Microbiol 2008 128 400 405
9. Prevalence of Arcobacter species in market-weight commercial turkeys. MM Andersen IV Wesley E Nestor DW Trampel, Antonie Van Leeuwenhoek 2007 92 309 317
10. Arcobacter. SJ Forsythe, Emerging foodborne pathogens Cambridge, England: Woodhead Publishing Ltd, Edited by: Motarjemi Y, Adams M, 2006 181 221
11. Prevalence of Arcobacter spp. in raw milk and retail raw meats in Northern Ireland. R Scullion CS Harrington RH Madden, J Food Prot 2006 69 1986 1990
12. Characterization of the Arcobacter contamination on Belgian pork carcasses and raw retail pork. E Van Driessche K Houf, Int J Food Microbiol 2007 118 20 26
13. Prevalence of foodborne microorganisms in retail foods in Thailand. SM Vindigni A Srijan B Wongstitwilairoong R Marcus J Meek PL Riley C Mason, Foodborne Pathog Dis 2007 4 208 215
14. Massive microbiological groundwater contamination associated with a waterborne outbreak in Lake Erie, South Bass Island, Ohio. TT Fong LS Mansfield DL Wilson DJ Schwab SL Molloy JB Rose, Environ Health Perspect 2007 115 856 864
15. Detection of Arcobacter spp. in piggery effluent and effluent-irrigated soils in southeast Queensland. HN Chinivasagam BG Corney LL Wright IS Diallo PJ Blackall, J Appl Microbiol 2007 103 418 426
16. Presence of Arcobacter spp. in environmental waters correlates with high levels of fecal pollution. L Collado I Inza J Guarro MJ Figueras, Environ Microbiol 2008 10 1635 1640
17. Dogs as carriers of the emerging pathogen Arcobacter. K Houf S De Smet J Bare S Daminet, Vet Microbiol 2008 130 208 213
18. Isolation of group 2 aerotolerant Campylobacter species from Thai children with diarrhea. DN Taylor JA Kiehlbauch W Tee C Pitarangsi P Echeverria, J Infect Dis 1991 163 1062 1067
19. Outbreak of recurrent abdominal cramps associated with Arcobacter butzleri in an Italian school. P Vandamme P Pugina G Benzi R Van Etterijck L Vlaes K Kersters JP Butzler H Lior S Lauwers, J Clin Microbiol 1992 30 2335 2337
20. Arcobacter species in humans. O Vandenberg A Dediste K Houf S Ibekwem H Souayah S Cadranel N Douat G Zissis JP Butzler P Vandamme, Emerg Infect Dis 2004 10 1863 1867
21. Arcobacter, what is known and unknown about a potential foodborne zoonotic agent! HT Ho LJ Lipman W Gaastra, Vet Microbiol 2006 115 1 13
22. Arcobacter butzleri: underestimated enteropathogen. V Prouzet-Mauleon L Labadi N Bouges A Menard F Megraud, Emerg Infect Dis 2006 12 307 309
23. Isolation and characterization of the emerging foodborn pathogen Arcobacter from human stool. K Houf R Stephan, J Microbiol Methods 2007 68 408 413
24. Multilocus sequence typing system for Campylobacter jejuni. KE Dingle FM Colles DRA Wareing R Ure AJ Fox FE Bolton HJ Bootsma RJL Willems R Urwin MCJ Maiden, J Clin Microbiol 2001 39 14 23
25. Population biology of Campylobacter jejuni and related organisms. MC Maiden KE Dingle, Campylobacter Washington, DC: ASM Press, Edited by: Nachamkin I, Szymanski C, Blaser MJ, 3rd edition 2008 27 40
26. Sequence typing and comparison of population biology of Campylobacter coli and Campylobacter jejuni. KE Dingle FM Colles D Falush MC Maiden, J Clin Microbiol 2005 43 340 347
27. Extended multilocus sequence typing system for Campylobacter coli, C. lari, C. upsaliensis, and C. helveticus. WG Miller SL On G Wang S Fontanoz AJ Lastovica RE Mandrell, J Clin Microbiol 2005 43 2315 2329
28. Clonal nature of Campylobacter fetus as defined by multilocus sequence typing. MA van Bergen KE Dingle MC Maiden DG Newell L van der Graaf-Van Bloois JP van Putten JA Wagenaar, J Clin Microbiol 2005 43 5888 5898
29. Campylobacter insulaenigrae isolates from northern elephant seals (Mirounga angustirostris) in California. RA Stoddard WG Miller JE Foley J Lawrence FM Gulland PA Conrad BA Byrne, Appl Environ Microbiol 2007 73 1729 1735
30. Major structural differences and novel potential virulence mechanisms from the genomes of multiple campylobacter species. DE Fouts EF Mongodin RE Mandrell WG Miller DA Rasko J Ravel LM Brinkac RT Deboy CT Parker SC Daugherty, et al. PLoS Biol 2005 3 15
31. The complete genome sequence and analysis of the Epsilonproteobacterium Arcobacter butzleri. WG Miller CT Parker M Rubenfield GL Mendz MM Wosten DW Ussery JF Stolz TT Binnewies PF Hallin G Wang, et al. PLoS ONE 2007 2 1358
32. Identification of host-associated alleles by multilocus sequence typing of Campylobacter coli strains from food animals. WG Miller MD Englen S Kathariou IV Wesley G Wang L Pittenger-Alley RM Siletz W Muraoka PJ Fedorka-Cray RE Mandrell, Microbiology 2006 152 245 255
33. Polyphasic taxonomic study of the emended genus Arcobacter with Arcobacter butzleri comb. nov. and Arcobacter skirrowii sp. nov., an aerotolerant bacterium isolated from veterinary specimens. P Vandamme M Vancanneyt B Pot L Mels B Hoste D Dewettinck L Vlaes C van den Borre R Higgins J Hommez, et al. Int J Syst Bacteriol 1992 42 344 356
34. Restriction fragment length polymorphisms in the ribosomal genes for species identification and subtyping of aerotolerant Campylobacter species. JA Kiehlbauch BD Plikaytis B Swaminathan DN Cameron IK Wachsmuth, J Clin Microbiol 1991 29 1670 1676
35. Differentiation of Arcobacter species by numerical analysis of AFLP profiles and description of a novel Arcobacter from pig abortions and turkey faeces. SL On CS Harrington HI Atabay, J Appl Microbiol 2003 95 1096 1105
36. MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) software version 4.0. K Tamura J Dudley M Nei S Kumar, Mol Biol Evol 2007 24 1596 1599
37. mlstdbNet - distributed multi-locus sequence typing (MLST) databases. KA Jolley MS Chan MC Maiden, BMC Bioinformatics 2004 5 86